G132729


Basic Information

Item Value
gene id G132729
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 13273963 ~ 13276574 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU196052
TCAATTTGGAgcaaatgtcatttattgtaGACCAAAAGGCATAAGCCGTAACACTGACTGAAGAAGCATATCACACACCCAGAATACAAGCTCAAATACAGATCCGGAGGTATGAGGTTGGAATTTTCTTCAGTGTTTGAGGAACGGTGCAAATGAAGCGGAAGAACACCACAGAAAAACCATTGGAAATGTACATAACCATTGATGTGGACGTGTTGTGACTGAGGTTTCCCTTTATTCTGCCTTTATGTAGTGTCGTGTGGAGACAACGCTGCCAAGTGTCAATGTCTGTCAAAGTTAGGCTGTTGTCACTGACTTCTCGGACCAGGGTCGTCTCTTTACCGTCCCATTTCTGAACATGAACCAATTTGCCTCCATCTATAGTTATCACGGACTGATGGTCAAACAGAAACAACAGGGTAAAGTTAATAAGACGAGCAGTTCTTACTTGGAACATTGTCTCATTTTTACTCTTGCTACCATGGAGCAGGGATGAGTGGCGTTGCCATGTATACAATTAATGATTGACCCAAGGAATGTCACGGGATAGGTCAATCTCCCTTTGGGCCTTCTGAGAAACCCTTGTATCCCATCAACAAAACCCTATTGTGTTAAACATCTTTCACCCAATTCAATGGGTCAGGCATGAAATTCTGCATGCCTTTAGCCATCTCAAAAGTGCAGGACTACCGAACGTGGGACTAATGCGTGCTCTGTGCGCACATATTACCTTAACTTTGCGGTCATCTGCAGTGGTCTCGTCAAATTCCTCTCCCAGTTTGAAATTGATTTCTGTGGTTTTGAATGTGCTGACGGTCTTAAGTGTGATGACGTCGCCCTCCATGGAGATGATGGTCGTGGGTTTGGTCATACTGCCAACCTGACGCGTGGCAAAGCCCCACCGAGGGCTTTCATGTAGTCATCGAAATTCTTGCTCTCCTTTAAGTTCCATGTGCCAACAAAAACGTCTGCCATGTTTAGAGCTGAGTGAGAGAACGAGAGCAAAGAACGAGAgcgagaaagaaagagtgagtAAAGAGAGGAGGGTAAGACAGCACCACTGAGCTCCTGCAATCTTACTGGCTGATTTATAACTGCTGTTTGTGATGTCACCACTACAAGTGTGGGGG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0030162 regulation of proteolysis biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0051246 regulation of protein metabolic process biological_process
GO:0006508 proteolysis biological_process

KEGG:

id description
ko00500 Starch and sucrose metabolism
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU196052 True 1130 lncRNA 0.45 3 13273963 13276574

Neighbor

gene id symbol gene type direction distance location
dclk3 LOC107706188,LOC107669321,LOC107591624,LOC107696548,LOC107742867,LOC107742847,LOC107593592 coding downstream 3543 13263431 ~ 13270420 (-)
cyhr1 cyhr1,LOC107706189,LOC107591623,LOC107742848,LOC107696565,LOC107669346 coding downstream 10539 13256715 ~ 13263424 (-)
susd5 LOC107706153,LOC107670128,LOC107593553,LOC107742875,LOC107591670,LOC107696526,LOC107706128 coding downstream 119741 13143789 ~ 13154222 (-)
fkbp9 fkbp9,LOC107669520,LOC107706181,LOC107591616,LOC107742858,LOC107593552,LOC108257175 coding downstream 135335 13132472 ~ 13138628 (-)
sytl1 sytl1,LOC107706182 coding downstream 142468 13126166 ~ 13131495 (-)
zcchc17 zcchc17,LOC107742843,LOC107696569,LOC107591626,LOC107706190,LOC107593562,LOC107669359 coding upstream 302 13276876 ~ 13279435 (-)
gpr186 gpr6,gpr186,gpr3,LOC107593596,LOC107696567,LOC107742872,LOC107591674,LOC107706201 coding upstream 142270 13418844 ~ 13421662 (-)
fam83hb LOC107697051,LOC107706202,LOC107591635,LOC107742834,LOC107696542 coding upstream 163980 13440554 ~ 13450908 (-)
ppt1 ppt1,LOC107697049,LOC107706207,LOC107589449,LOC107591677 coding upstream 203413 13479987 ~ 13482841 (-)
klhl43 klhl43,LOC107706211,LOC107589442,LOC107591641,LOC107742826,LOC107696549,LOC108426671 coding upstream 233244 13509818 ~ 13516438 (-)
G132726 LOC107696582,LOC107591653,LOC107742849,LOC107669332,LOC107706187,LOC107593556 non-coding downstream 17944 13254836 ~ 13256019 (-)
G132682 NA non-coding downstream 130342 13143303 ~ 13143621 (-)
G132675 NA non-coding downstream 166830 13106913 ~ 13107133 (-)
G132674 LOC107670044,LOC107706180,LOC107593577 non-coding downstream 168372 13104879 ~ 13105591 (-)
G132665 NA non-coding downstream 214653 13054785 ~ 13059310 (-)
G132695 NA non-coding upstream 26526 13303100 ~ 13336775 (-)
G132795 NA non-coding upstream 99309 13375883 ~ 13377672 (-)
G132818 NA non-coding upstream 177922 13454496 ~ 13479319 (-)
G132828 NA non-coding upstream 207707 13484281 ~ 13486189 (-)
G132837 NA non-coding upstream 250677 13527251 ~ 13528140 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other downstream 244614 13027817 ~ 13029349 (-)
sem1 NA other downstream 604748 12597774 ~ 12669215 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other downstream 835878 12435779 ~ 12438085 (-)
G132292 NA other downstream 1441056 11832173 ~ 11832907 (-)
LOC122323871 ctnnal1,LOC107724361,LOC107670281,LOC107653856,LOC107710384 other downstream 1517525 11709923 ~ 11756438 (-)
G132733 NA other upstream 7957 13284531 ~ 13285461 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other upstream 218256 13494830 ~ 13502370 (-)
G132785 NA other upstream 231090 13507664 ~ 13508453 (-)
G133132 NA other upstream 1507614 14784188 ~ 14784423 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other upstream 1610954 14887528 ~ 14891918 (-)

Expression


Co-expression Network