G132828


Basic Information

Item Value
gene id G132828
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 13484281 ~ 13486189 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU196217
CAAATCCCTCCAGCGCACGCAAGGCAAACAACCACTTGGCTCCAAGTTGTGCTGACAGCGGAGTGAGGAGAGTGAGGACGGCAGTCCCAAGCACACCACCACCGAGGAACAGGCTTCCCCCAAAGCGACCTGACAGGTAACCTCCCGGAATCTGAGTAAACAGGTATCCAAAAAAGAAAGCACCGAGCAGCATTCCTTGCGTCTCGGGATTCCACGGGTATCTTGGAATCtaggaaaagaaaatgaaatggaGAGAGATACAACAAAAGCCATTTTTTACTCGAAGTTATGAAAATGCATGACATATCCACCAGGTTCGGTGCATGAAATGCTGCATGCGGTTTATTCTTACCCCATCTGGCTGTTCTGAACTTTGGCTGTTGTTGTCAAGTGTATGGGTGGGTACTGGACACTCGTTTGATATATTGCTATAGGATGACGACTGATCATTGGTTCCATTAACCATAGCAACCATAGCAACACTGAGATTTACACGAAGACCATAGACCACAGCAAAGCCAAAGAACATCATAGCAGCCAGATTGCATCGCACGGAGCAGCATTTGGGAGGCACTgtcacacatacaaacacattctGAAATTTTAACCAActacatacattaaaaaaaggttacagTCACTTAGCAAACTACACTTCAAAAGTTAAAGGTGCACtagattattaatatatatttttttaaaagttaatactCTTTATTTAGTGAGGGCTCATTAAAAAAGTGTcacgtttccacaaaaaaatgaaacagcaTGACTGTTTACAATATTGATAAAACAACAAAGGAATGTTCGTATAGATGTATATAAATTAGAGTTTAacatatattaaactacaaaacaaaaacaaacaaaccccaaACTACCAAAAAATGGTAGCATGTGTGTGACAAGACCTATTTAGTTCAGAAAACAAGCCACCGACTTTCATGCAGACTGCAAGAGGATCAAACTGCAGACCGACCTGTGACTCTTTCCACTTCCTTCTCTAGAAGAGGCGCAGTGTCACCGTCCTGGTCGTCTGCGGTCGAGTTAATGGAGTAACCGTCTTTTAGAGCCATGATTGCAGAGATGGAGGTTTTGGGCGGAGCTTGAGTTAGTTTAAGTATGACATCCTCAAatcctgaaacacaaacaagacgCTTCAGAAAATGCAATTCAGCTCGTTTGTGTTTTGTCAGAATCATCGACAACTAATCAACAAATGCAGGTCTATGCTGTATTTAGTCAGTTTATAAACTGCTGTCTAGTTCTCCACGTCAGTGCTTGATATCATCAGTCCATTTTCTGTTAGTCTTCCTCTTCTGTTTGGACCATCCATCATGCACCAAGTTCCCTTTCATCAAACACCAAGTTCCCTTTCATCATTCTTTATGCAAACgtgtcgtttttttt

Function

GO:

id name namespace
GO:0042116 macrophage activation biological_process
GO:0002274 myeloid leukocyte activation biological_process
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196217 True 1413 lncRNA 0.41 2 13484281 13486189

Neighbor

gene id symbol gene type direction distance location
ppt1 ppt1,LOC107697049,LOC107706207,LOC107589449,LOC107591677 coding downstream 1440 13479987 ~ 13482841 (-)
fam83hb LOC107697051,LOC107706202,LOC107591635,LOC107742834,LOC107696542 coding downstream 33373 13440554 ~ 13450908 (-)
gpr186 gpr6,gpr186,gpr3,LOC107593596,LOC107696567,LOC107742872,LOC107591674,LOC107706201 coding downstream 62619 13418844 ~ 13421662 (-)
zcchc17 zcchc17,LOC107742843,LOC107696569,LOC107591626,LOC107706190,LOC107593562,LOC107669359 coding downstream 204846 13276876 ~ 13279435 (-)
dclk3 LOC107706188,LOC107669321,LOC107591624,LOC107696548,LOC107742867,LOC107742847,LOC107593592 coding downstream 213861 13263431 ~ 13270420 (-)
klhl43 klhl43,LOC107706211,LOC107589442,LOC107591641,LOC107742826,LOC107696549,LOC108426671 coding upstream 23629 13509818 ~ 13516438 (-)
LOC122323662 LOC107592078,LOC107654710,LOC107742822,LOC107696579,LOC107591646,LOC100705487,LOC101466516,LOC106588914 coding upstream 155936 13642125 ~ 13643645 (-)
mterf3 mterf3,LOC107706158,LOC107654709,LOC107742869,LOC107696564,LOC107591645 coding upstream 158142 13644331 ~ 13646795 (-)
rad21b rad21,LOC107696550,LOC107591647,LOC107591962 coding upstream 160632 13646821 ~ 13654484 (-)
csmd3b csmd3,si:ch211-233f16.1,LOC107706218 coding upstream 173650 13659839 ~ 13992319 (-)
G132818 NA non-coding downstream 4962 13454496 ~ 13479319 (-)
G132795 NA non-coding downstream 106609 13375883 ~ 13377672 (-)
G132695 NA non-coding downstream 147506 13303100 ~ 13336775 (-)
G132709 NA non-coding downstream 155897 13238689 ~ 13328384 (-)
G132837 NA non-coding upstream 41062 13527251 ~ 13528140 (-)
G132846 NA non-coding upstream 62551 13548740 ~ 13549751 (-)
G132852 NA non-coding upstream 74939 13561128 ~ 13561459 (-)
LOC122324095 NA non-coding upstream 782078 14268267 ~ 14272718 (-)
G133016 rbm24a,LOC107696536,LOC107592929,LOC107706227,LOC107754275,LOC107654717,LOC107591968 non-coding upstream 917329 14403518 ~ 14428822 (-)
G132733 NA other downstream 198820 13284531 ~ 13285461 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other downstream 454932 13027817 ~ 13029349 (-)
sem1 NA other downstream 815066 12597774 ~ 12669215 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other downstream 1046196 12435779 ~ 12438085 (-)
G132292 NA other downstream 1651374 11832173 ~ 11832907 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other upstream 8641 13494830 ~ 13502370 (-)
G132785 NA other upstream 21475 13507664 ~ 13508453 (-)
G133132 NA other upstream 1297999 14784188 ~ 14784423 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other upstream 1401339 14887528 ~ 14891918 (-)
G133217 NA other upstream 1880245 15366434 ~ 15369736 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location