G132916


Basic Information

Item Value
gene id G132916
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 14175839 ~ 14582416 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU196330
tatctatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatattgttGTTCTGTACTGTTGCAGGAAGTCCAAGGTGAGTTGTAGAACATCATGCTAGTCAGATTTACTAACAGGCTGTGTGCTGAACACTGGCAGGAAGAAAGAGGTTAAAGTGCTACACTTTAAGATTACATACAACAAACAAGATATTTCAGCAGCAAGTCTTTCACATTGTCCAAAAGGGAACATCAGTAGTCCTTTGAGTTTGAAACTGATATGATGTAAAGAGCTACTGAAGATCAGATGGatcctttttaaaattgtttgaTCAGAGGGAGGGTCTAGATCTGCTTTAGGAGAGTTTTGAGAAGTGGACTGAAGGAAGACTGCAGTCTGGTGTGTGCTGTGGACGTCTGAGGAGATGGACAAGGAATGGAGGATGTCCTGGAATTCTCAAGCTACGGTGAACTCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196330 True 497 lncRNA 0.39 2 14175839 14582416

Neighbor

gene id symbol gene type direction distance location
lrrc14b lrrc14b,LOC107706156,LOC107654673,LOC107742820,LOC107696555 coding upstream 533770 13638212 ~ 13642069 (+)
LOC122323661 LOC107654672,LOC107706155,LOC107592076,LOC107742821,LOC107696516,LOC107696575 coding upstream 537751 13627237 ~ 13638088 (+)
ankib1a LOC107706216,LOC107654707,LOC107742824,LOC107696581,LOC107589494 coding upstream 621005 13536137 ~ 13554834 (+)
lypla2 lypla2,LOC107654706,LOC107706215,LOC107696570,LOC107742825 coding upstream 640861 13528592 ~ 13534978 (+)
pithd1 pithd1,LOC107654704,LOC107696572 coding upstream 647921 13525347 ~ 13527918 (+)
ext1c ext1c,ext1,LOC107706241,LOC107654729,LOC107592945,LOC107688378,LOC107754264 coding downstream 256211 14838627 ~ 14886764 (+)
ncdn ncdn,LOC107706243,LOC107654732,LOC107754263,LOC107688377,LOC107592947,LOC107585609 coding downstream 309973 14892389 ~ 14896444 (+)
tfap2e tfap2e,LOC107654734,LOC107688421,LOC107706245,LOC107754262 coding downstream 315133 14897549 ~ 14906707 (+)
ago4 LOC106511154,LOC107591980 coding downstream 352743 14935159 ~ 14951672 (+)
cldn35 LOC107591984,LOC107654683,LOC107592950,LOC107754258,LOC108430542 coding downstream 370961 14953377 ~ 14956945 (+)
G132913 trps1,LOC107706219,LOC107592043,LOC107754280,LOC107696539,LOC107562946 non-coding upstream 7355 14168095 ~ 14168484 (+)
G132910 NA non-coding upstream 69578 14097276 ~ 14106261 (+)
G132884 NA non-coding upstream 327724 13846782 ~ 13848115 (+)
G132774 NA non-coding upstream 614394 13561167 ~ 13561445 (+)
G132773 NA non-coding upstream 619160 13555011 ~ 13556679 (+)
G133068 NA non-coding downstream 175208 14757624 ~ 14757976 (+)
LOC122324050 NA non-coding downstream 439859 15022275 ~ 15035422 (+)
G133109 ppce,LOC107602379,LOC107688393,LOC107706142,LOC107592053,LOC107654745,LOC107710331 non-coding downstream 613641 15196057 ~ 15281004 (+)
G133129 NA non-coding downstream 792084 15374500 ~ 15378019 (+)
G133253 NA non-coding downstream 877922 15460338 ~ 15460706 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other upstream 839090 13309427 ~ 13336749 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other upstream 1149813 13021417 ~ 13026026 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other upstream 1750761 12423290 ~ 12425078 (+)
LOC122323774 NA other upstream 2062942 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 2651958 11522229 ~ 11523881 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 205128 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 252185 14834601 ~ 14837969 (+)
LOC122323518 LOC107654743,LOC107688368,LOC107602377,LOC108413484,LOC107706254,LOC107710329 other downstream 496038 15078454 ~ 15192566 (+)
LOC122323314 LOC107602378,LOC107591987,LOC107706255,LOC107710332,LOC107688367,LOC107654747 other downstream 726311 15308727 ~ 15313877 (+)
anxa14 LOC107706258,LOC107654687,LOC107710308,LOC107592054,LOC107688418 other downstream 773192 15355608 ~ 15361845 (+)

Expression


Co-expression Network