G133253


Basic Information

Item Value
gene id G133253
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15460338 ~ 15460706 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU196781
GGACTGAACACGGTCTTGGTTTgcttattaattttcttttctctttcttttcttttaacgTCATTGTATATCCTTCTGGACCTAGACATCAAACCTGCATCGGGAGATTCCAGTTTGAGTTAATCTACAGGCAGATATTCCAGCCATTTCAAGACTAGCttggaataatatatatatatataaatattatttccgTGGAGGAGATGAAGATCTGAGGTAAGTAAAGTTCTACGTTCAATCATAACTATTCTGAACGCTATTCTGACAATACACCGAGATGCTGATATTTAAGCATCCCCGCTCATTATGGAAGAATAACGATAGCTTGATAAACAGTTTTATCACATGAGGAGTTTGAGGAGATTCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196781 True 369 lncRNA 0.36 1 15460338 15460706

Neighbor

gene id symbol gene type direction distance location
si:ch1073-376c22.1 LOC107710310 coding upstream 55792 15400565 ~ 15404546 (+)
topaz1 topaz1,LOC107706144,LOC107736171 coding upstream 61495 15389000 ~ 15398843 (+)
LOC122324102 LOC107654690,LOC107706166,LOC107592089,LOC107602352 coding upstream 75933 15380637 ~ 15384405 (+)
trnap-agg_21 NA coding upstream 80797 15379470 ~ 15379541 (+)
sgo1 LOC107654748,LOC107706259,LOC107688364,LOC107592057,LOC107578328,LOC107602351,LOC107710334 coding upstream 83856 15371304 ~ 15376482 (+)
LOC122323726 ctnnb1,LOC107706261,LOC107654753,LOC107710337,LOC107688361,LOC107592060,LOC103034575,LOC108414240 coding downstream 8878 15469584 ~ 15481200 (+)
cmtm8a LOC107688387,LOC107602356 coding downstream 31654 15492360 ~ 15495366 (+)
LOC122323444 LOC107654755,LOC107591990,LOC107706264,LOC107602357 coding downstream 34799 15495505 ~ 15497477 (+)
cpne4b cpne4b,cpne4,LOC107654757,LOC107706265,LOC107591992,LOC107602385,LOC108425151 coding downstream 48831 15509537 ~ 15532560 (+)
mrpl3 mrpl3,LOC107688359,LOC107710340,LOC107654758,LOC107748644 coding downstream 74191 15534897 ~ 15541499 (+)
G133129 NA non-coding upstream 82319 15374500 ~ 15378019 (+)
G133109 ppce,LOC107602379,LOC107688393,LOC107706142,LOC107592053,LOC107654745,LOC107710331 non-coding upstream 179334 15196057 ~ 15281004 (+)
LOC122324050 NA non-coding upstream 424916 15022275 ~ 15035422 (+)
G133068 NA non-coding upstream 702362 14757624 ~ 14757976 (+)
G132916 NA non-coding upstream 877922 14175839 ~ 14582416 (+)
G133256 NA non-coding downstream 21292 15481998 ~ 15483517 (+)
G133265 NA non-coding downstream 88138 15548844 ~ 15549137 (+)
G133276 NA non-coding downstream 122499 15583205 ~ 15606585 (+)
G133270 LOC107748653,LOC107592000,LOC107654766,LOC107688348,LOC107710349 non-coding downstream 202890 15663596 ~ 15664196 (+)
G133394 NA non-coding downstream 303244 15763950 ~ 15764619 (+)
cckb cck,LOC107592091,LOC107654691,LOC107706167,LOC107688363 other upstream 35841 15421135 ~ 15424497 (+)
anxa14 LOC107706258,LOC107654687,LOC107710308,LOC107592054,LOC107688418 other upstream 98493 15355608 ~ 15361845 (+)
LOC122323314 LOC107602378,LOC107591987,LOC107706255,LOC107710332,LOC107688367,LOC107654747 other upstream 146461 15308727 ~ 15313877 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other upstream 247908 14787544 ~ 15212430 (+)
G133266 LOC107748647,LOC107591995 other downstream 108958 15569664 ~ 15577981 (+)
aste1b aste1,LOC107654763,LOC107688353,LOC107710346,LOC107580865 other downstream 159553 15620259 ~ 15626187 (+)
hoxa5a hoxa5a,LOC107654773,LOC107592096,LOC107710354,LOC107688408,LOC107602374,LOC107748660 other downstream 313966 15774672 ~ 15776784 (+)
LOC122323320 NA other downstream 417419 15878125 ~ 15879267 (+)
ccdc126 ccdc126,LOC107656662,LOC107593617,LOC107592015,LOC107739571,LOC107688383 other downstream 474554 15935260 ~ 15938820 (+)

Expression


Co-expression Network