G133373 (LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391)


Basic Information

Item Value
gene id G133373
gene name LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15659919 ~ 15660720 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU196955
TGTGCTGTACCTTACCGATTTACATGCCTGGAATAGGGTTAACAAGTCATATATTATctacaaagacagaaagacattaATTACAAAACCAAGCAATTCTGCCAACCAGCAGCTGAGGCCCAGAACGAtcgataaaaataaatgaaaagacgaaaaagaaaagaaaacgatTTGCAGTTTCAGTGGTTACTCATTTGTAGCCAAAATGACTTAGTGCCAAAACTGTCTATTATTTTCTCACAGCCTTCAGTCTGAGTATCTAAGCATTATGACATCGTCGTCTCTTCGAGCATGGCTGTTGTCAAAGAAGCGGTCACCGGGGAACTGGATGAGGTCACCTTCTTCAGCCAGGTGCCTGCCACTCTGGTACCCGCTGAATTCAGAAGAGACACAGGTAGTGGCCACGGTAGAGCGAAACGGATGTCTGGTCGAGTACATGTGACGTACGTGTGCATGAGAGGACGACTTCCTGCTTCTGATCCGCCTCTTCAACGCACGCCCCAGCCAGACTCCGCCCACCAGAAGGAGGAGCAGTGCATTGGCCGCCAGGGCTGCTGCTGTGACCAGCTGTAGGTTGACTTCGCTTGTCACCGAGGGCAAAAGCGTGACAAATCCAGTGCAGTGATCTCTGGGGGCCACCTGGCACAAAGCTCCTCCCACAACGCTCTCCACGCAGGTGATGTAGGTGGAGTCTGGGCGGAGCTCTTGGAGGGTCACCGCCCGGTCGGATCCGTCTGTGTAAACATAGCGTGGGAAGCGGAAAGCATGGCCGAAGCGGTCGAATAAAACCCGAAAGAGAAGT

Function

NR:

description
PREDICTED: TLR4 interactor with leucine rich repeats-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196955 True 802 TUCP 0.51 1 15659919 15660720

Neighbor

gene id symbol gene type direction distance location
wipf3 sb:cb649,wipf3,LOC107592062,LOC107602389,LOC107688351,LOC107592063,LOC107654765 coding downstream 17462 15636663 ~ 15642457 (-)
LOC122323318 NA coding downstream 55828 15598655 ~ 15604091 (-)
LOC122323317 sall3,sall3b,LOC107696994,LOC107592031,LOC107739555,LOC107563697,LOC107656642 coding downstream 63636 15588991 ~ 15596283 (-)
smarcc1b smarcc1b,LOC107748646,LOC107654761,LOC107688355,LOC107710344 coding downstream 72207 15578624 ~ 15587712 (-)
cspg5b LOC107748647,LOC107591995,LOC107710343,LOC107688356,LOC107602387,LOC107654760 coding downstream 82681 15558513 ~ 15577238 (-)
creb5a creb5a,LOC107748653,LOC107592000,LOC107710349,LOC107602393,LOC107654766,LOC107688348 coding upstream 963 15661683 ~ 15668966 (-)
tax1bp1a tax1bp1a,LOC107654769,LOC107592002,LOC107710350,LOC107748654,LOC107688347 coding upstream 24434 15685154 ~ 15702155 (-)
snx10a LOC107592007,LOC107748666,LOC107656653,LOC107710327,LOC107688406,LOC107602366 coding upstream 174184 15834904 ~ 15839908 (-)
cbx3a cbx3a,LOC107656668,LOC107592008,LOC107688340,LOC107602402 coding upstream 182963 15843683 ~ 15847374 (-)
nfe2l3 nfe2l3,LOC107748669,LOC107656667,LOC107710360,LOC107592065,LOC107602401 coding upstream 187878 15848598 ~ 15854316 (-)
G133361 NA non-coding downstream 33639 15625325 ~ 15626280 (-)
G133315 NA non-coding downstream 178717 15480332 ~ 15481202 (-)
G133313 NA non-coding downstream 235421 15413975 ~ 15424498 (-)
G133226 NA non-coding downstream 275804 15383847 ~ 15384115 (-)
G133190 LOC107654743,LOC107706254 non-coding downstream 382516 15190805 ~ 15277403 (-)
G133370 LOC107710351,LOC107688346 non-coding upstream 11462 15672182 ~ 15673003 (-)
G133375 NA non-coding upstream 20365 15681085 ~ 15681626 (-)
G133376 NA non-coding upstream 21038 15681758 ~ 15682073 (-)
G133387 NA non-coding upstream 92710 15753430 ~ 15754646 (-)
G133392 NA non-coding upstream 98628 15759348 ~ 15759640 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other downstream 11340 15644862 ~ 15648579 (-)
G133217 NA other downstream 290183 15366434 ~ 15369736 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other downstream 768001 14887528 ~ 14891918 (-)
G133132 NA other downstream 875496 14784188 ~ 14784423 (-)
G132785 NA other downstream 2151466 13507664 ~ 13508453 (-)
evx1 evx1,LOC107688412,LOC107602371,LOC107710323,LOC107654696,LOC107748750,LOC107592093 other upstream 76227 15736947 ~ 15740329 (-)
npy LOC107592012,LOC107748754,LOC107656665,LOC107688404 other upstream 261503 15922223 ~ 15924285 (-)
mbpa mbpa,tshz1,LOC107563706,LOC107748691,LOC107592027,LOC107739558,LOC107696938,LOC107688322,LOC107593600,LOC107592029,LOC107696978,LOC107739556,LOC108429099 other upstream 620237 16280957 ~ 16508595 (-)
G133834 pkhd1l1,LOC107592039,LOC107748704,LOC107739541,LOC107656576,LOC107563710 other upstream 1196259 16856979 ~ 16869564 (-)
LOC122323321 NA other upstream 1222267 16882987 ~ 16883480 (-)

Expression


Co-expression Network