npy (LOC107592012,LOC107748754,LOC107656665,LOC107688404)


Basic Information

Item Value
gene id npy
gene name LOC107592012,LOC107748754,LOC107656665,LOC107688404
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15922223 ~ 15924285 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU197117
GGTTCGCGCGCATCAAAAGAGTCGCGCGCAATTGCGCGTGGGCTCCGCTCTTTACGGCACGAGCTGTACAGGTATAAAACCAGCAGACGCACGACTCAGAGTGCAGAAAATCGGAGAAGTCAACACCCACAGAGCAAGAAGTGCAATCAAGACCTCGTTTAGGAGAGTATGCatccaaacatgaaaatgtggATCGGCTGGGCAGCCTGCGCCTTCCTTTTGTTCGCCTGCTTGGGAACTCTAACGGAAGGGTATCCAACAAAACCCGACAACCCTGGAGAGGACGCACCTGCGGAGGAGCTCGCCAAGTATTACTCTGCACTAAGACACTACATCAACCTCATAACACGGCAGAGGTATGGCAAAAGGTCCAGTGCTGACACCTTAATTTCAGACCTTCTGATTGGTGAAACAGAGTCCCACCCCCAGACAAGATATGAGGACCATTTGGTGTGGTGATCCCAGCAACTGTGTTAATCCAGTTATGTCCATGTGTCATCCTGTTAACTATTACAGCAACCAGATCTCATAAAATTGAAATCTTCTGCGTCATCAAGATCAGCAACCTGCTGCAAAGTACCACAGTCATCGTCAGGATAGTGAAAATACTGCAGAACATtcaataaacactttaaatcaTTATGTCAAGTACACGTCTGTGTGAAATGCTCTGTCATATGAATATGGTCTCGTTGACGCGTGCTCTCTCTAGACTCATCAAAGTTCAGCCAGCCGTTCAACAAGACAATTGTACAGAGACttaccgtgtgtgtgtgtgtgtcgtgtccATCGTAATCCTCGATATCAAAGGAGAACATTTACATGTACAGTATGACCGTGCTAATAAAATCCACTATATTTGAAAGa
>XM_043217262.1
GTCGCGCGCAATTGCGCGTGGGCTCCGCTCTTTACGGCACGAGCTGTACAGGTATAAAACCAGCAGACGCACGACTCAGAGTGCAGAAAATCGGAGAAGTCAACACCCACAGAGCAAGAAGTGCAATCAAGACCTCGTTTAGGAGAGTATGCatccaaacatgaaaatgtggATCGGCTGGGCAGCCTGCGCCTTCCTTTTGTTCGCCTGCTTGGGAACTCTAACGGAAGGGTATCCAACAAAACCCGACAACCCTGGAGAGGACGCACCTGCGGAGGAGCTCGCCAAGTATTACTCTGCACTAAGACACTACATCAACCTCATAACACGGCAGAGGTATGGCAAAAGGTCCAGTGCTGACACCTTAATTTCAGACCTTCTGATTGGTGAAACAGAGTCCCACCCCCAGACAAGATATGAGGACCATTTGGTGTGGTGATCCCAGCAACTGTGTTAATCCAGTTATGTCCATGTGTCATCCTGTTAACTATTACAGCAACCAGATCTCATAAAATTGAAATCTTCTGCGTCATCAAGATCAGCAACCTGCTGCAAAGTACCACAGTCATCGTCAGGATAGTGAAAATACTGCAGAACATtcaataaacactttaaatcaTTATGTCAAGTACACGTCTGTGTGAAATGCTCTGTCATATGAATATGGTCTCGTTGACGCGTGCTCTCTCTAGACTCATCAAAGTTCAGCCAGCCGTTCAACAAGACAATTGTACAGAGACttaccgtgtgtgtgtgtgtgtcgtgtccATCGTAATCCTCGATATCAAAGGAGAACATTTACATGTACAGTATGACCGTGCTAATAAAATCCACTATATTTGAAA

Function

NR:

description
PREDICTED: pro-neuropeptide Y

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0031843 type 2 neuropeptide Y receptor binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197117 True 867 TUCP 0.46 4 15922223 15924285
XM_043217262.1 False 845 mRNA 0.46 4 15922225 15924265

Neighbor

gene id symbol gene type direction distance location
pals2b mpp6b,LOC107748671,LOC107592011,LOC107656663 coding downstream 2613 15902791 ~ 15919610 (-)
nfe2l3 nfe2l3,LOC107748669,LOC107656667,LOC107710360,LOC107592065,LOC107602401 coding downstream 67907 15848598 ~ 15854316 (-)
cbx3a cbx3a,LOC107656668,LOC107592008,LOC107688340,LOC107602402 coding downstream 74849 15843683 ~ 15847374 (-)
snx10a LOC107592007,LOC107748666,LOC107656653,LOC107710327,LOC107688406,LOC107602366 coding downstream 82315 15834904 ~ 15839908 (-)
tax1bp1a tax1bp1a,LOC107654769,LOC107592002,LOC107710350,LOC107748654,LOC107688347 coding downstream 220068 15685154 ~ 15702155 (-)
fam221a fam221a,LOC107748673,LOC107592014,LOC107656661,LOC107739639,LOC107688403 coding upstream 7599 15931884 ~ 15936477 (-)
gpnmb gpnmb,LOC107656657,LOC107688332,LOC107739567,LOC107748677 coding upstream 52047 15976332 ~ 15983111 (-)
rftn1a rftn1a,LOC107592099,LOC107656650,LOC107688402,LOC107748728,LOC107739606,LOC107593619 coding upstream 65294 15989579 ~ 16005685 (-)
dazl LOC107656655,LOC107592019,LOC107593610,LOC107739568,LOC107688400,LOC107748682 coding upstream 82020 16006305 ~ 16011313 (-)
tbc1d5 tbc1d5,LOC107748680,LOC107656654,LOC107688331,LOC107739565 coding upstream 87559 16011844 ~ 16033512 (-)
G133487 NA non-coding downstream 23454 15896816 ~ 15898769 (-)
G133476 NA non-coding downstream 40646 15880944 ~ 15881577 (-)
G133470 NA non-coding downstream 59074 15862942 ~ 15863149 (-)
G133469 NA non-coding downstream 66289 15855664 ~ 15855934 (-)
LOC122323540 NA non-coding downstream 119411 15800785 ~ 15802812 (-)
G133499 NA non-coding upstream 13155 15937440 ~ 15938811 (-)
G133554 NA non-coding upstream 24701 15948986 ~ 15949462 (-)
G133558 NA non-coding upstream 63654 15987939 ~ 15996866 (-)
G133564 NA non-coding upstream 80827 16005112 ~ 16101982 (-)
G133570 NA non-coding upstream 93242 16017527 ~ 16024738 (-)
evx1 evx1,LOC107688412,LOC107602371,LOC107710323,LOC107654696,LOC107748750,LOC107592093 other downstream 181894 15736947 ~ 15740329 (-)
G133373 LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391 other downstream 261503 15659919 ~ 15660720 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other downstream 273644 15644862 ~ 15648579 (-)
G133217 NA other downstream 552487 15366434 ~ 15369736 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other downstream 1030305 14887528 ~ 14891918 (-)
mbpa mbpa,tshz1,LOC107563706,LOC107748691,LOC107592027,LOC107739558,LOC107696938,LOC107688322,LOC107593600,LOC107592029,LOC107696978,LOC107739556,LOC108429099 other upstream 356672 16280957 ~ 16508595 (-)
G133834 pkhd1l1,LOC107592039,LOC107748704,LOC107739541,LOC107656576,LOC107563710 other upstream 932694 16856979 ~ 16869564 (-)
LOC122323321 NA other upstream 958702 16882987 ~ 16883480 (-)
G133842 NA other upstream 962175 16886460 ~ 16887000 (-)
LOC122324114 NA other upstream 965544 16889829 ~ 16890874 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014715 npy coding NC_007130.7 CM002903.2 20110699 ~ 20114149 (-)