G133629 (LOC107748698,LOC107697034)


Basic Information

Item Value
gene id G133629
gene name LOC107748698,LOC107697034
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 16702165 ~ 16703752 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU197373
CTTCTGTTCAGTGGCTCTCTGTGCACAGGCTTTGAGGGGCTCTTTGTCCGCCAGCTGTCTGAGGCGGTTCACGGTGCGGCTCTCACAGCCCTCTAGTCTCAGTCTCAGGTCCTTGATCTGGGTGATGTAACTCTTACACACTGACTCATCCTGTTCCcctgaataatttaaatatttagtgttaaaAAAGCTCAAACTCTGATACCAAAAAACAATCCCAAATCAAAACCACACACAGATTTCTAGAAAGGTCTCAGTCATATGTTGTATCTGCACTACAggcacactactgttcaaatgtctGGAGTCAGTCAAAATTGTAAGCATTTTTGAATATTGAACTCTCACCAAGGCtttattcatttgatcaaaatacagtagaaacagtaatactgtaaaatattgttacaatttaaagtacAGCGACTGTTTCtgattttagtatatttaaacattttatttatacatgttttCAACAAATcccttaaaaatttgtttaataatgcTGCTTTGGTACTCAATTTTTGGACAAAACAAATGTGCTGCTTAAAAACATATGTGCATGCCAAAGATGTatcttaaaaaccaaaaaagtgctgtttttattaaaacggAATCCATTTTTTCAGGGCTTTTTGATGGATGAAAATGAACCAGAAAacctttattacattataaatgtatttgctgtgaattttaatcaatttaatttatgaatgaaaatattaatttcttgaCTGCCaacctttaaacagtaatgtatATTTTCACATGAAATCAAGCTGACATAGTTAGAAGCATTTGCATTCAAGTGCTTGTAGATAATGTGTTTAACGTAAATCAGTTCATTTGCACAGTTCATTTTAAGTGCATTCactgcatttcaaaatatcaaataGTGAGGAAAATCTCTGTAATTTGAcaccacaaaaaatattaaagacatGCTTAGAAACAGCAACACACACTGCTCCACTAGCAGTACATTGGAGTCAAAGGGGAAGAAAGCAAAATGCAAGCGataacaaacaaatcatttgcaGTTTATAAACAAAGAAACCCACACTGCACTGCAATCTTTACCCAGTATGCTTCCCTTCTGGATGAAAACAGGTTCTGAAAAATAAGTCTTGCAGTCATAATGGGAGGTGGCCCTATCCCGAATTTTCAAACTATGCTGTCATAAAAACGCTTAATCCAGCAGAAGATCAAACCTTCCTTTGTGTTGCATCAAGCATGCAGAAACATTTGCAGCTGTGCTCAGAGCTACACCTTAAAACAGGGTTGTTCCTGGAGCCAAGACAGCTTTGTCTGTGTGCAATCTCTTTCACTTGACGAACAGTGAAAGTGATGGATGGTTTCTATACATCTGGACAAACCCCGCCGCCCTAACATAACACCTACCTTGTTCAACAGAGCGTAGCAAGGTATCATAGTGTTGAGTGGCTTTGCTGTAACTGTTTTCGGCTTGCAAGCGATCGTCAGCACCGAAGAGCTCAGAATCCTGACTGTCACGCATGAAGGCCTGATAGTGTTCCTCCAGGTTCTTCAGGGTCAGGCGATATTCCTCAACTCTCAAAGTCTTAAA

Function

NR:

description
PREDICTED: plectin-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197373 True 1588 lncRNA 0.38 1 16702165 16703752

Neighbor

gene id symbol gene type direction distance location
nfatc1 nfatc1,LOC107592032,LOC107739553,LOC107656600,LOC107697147,LOC107563708 coding upstream 54225 16609949 ~ 16647940 (+)
atp9b atp9b,LOC107656641,LOC107563702,LOC107697002 coding upstream 99619 16562326 ~ 16602546 (+)
sall3b sall3,sall3b,LOC107696994,LOC107592031,LOC107563697,LOC107739555,LOC107656642 coding upstream 140189 16550405 ~ 16561976 (+)
galr1a galr1,galr1a,LOC107697195,LOC107592101,LOC107563713,LOC107656602,LOC107739633 coding upstream 181359 16518140 ~ 16520806 (+)
tshz1 tshz1,LOC107748691,LOC107592027,LOC107739558,LOC107696938,LOC107688322,LOC107593600 coding upstream 342728 16324141 ~ 16359437 (+)
trhrb trhrb,LOC107656598,LOC107592073,LOC107748762,LOC107563716,LOC107739629 coding downstream 100199 16803951 ~ 16809223 (+)
pkhd1l1.1 pkhd1l1,LOC107748704,LOC107592039,LOC107739541,LOC107563710,LOC107656576 coding downstream 128907 16832659 ~ 16868461 (+)
gdf6b gdf6b,LOC107697222,LOC107592104,LOC107563717,LOC107739601 coding downstream 164941 16868693 ~ 16871477 (+)
LOC122323882 irgf1,LOC107656631,LOC107599582 coding downstream 248357 16952109 ~ 16954762 (+)
ssr2 ssr2,LOC107739538,LOC107748705 coding downstream 253139 16956891 ~ 16959237 (+)
G133628 LOC107592072,LOC107697034,LOC107748698 non-coding upstream 945 16700874 ~ 16701220 (+)
G133627 LOC107697034,LOC107656577,LOC107748698 non-coding upstream 3347 16695485 ~ 16698818 (+)
G133597 NA non-coding upstream 193599 16499661 ~ 16508566 (+)
G133596 NA non-coding upstream 199685 16343332 ~ 16502480 (+)
G133630 NA non-coding downstream 779 16704531 ~ 16705040 (+)
G133631 NA non-coding downstream 1801 16705553 ~ 16705759 (+)
G133632 pleca non-coding downstream 3618 16707370 ~ 16707696 (+)
G133639 NA non-coding downstream 60880 16764632 ~ 16764897 (+)
G133667 NA non-coding downstream 179816 16883568 ~ 16900324 (+)
G133626 LOC107697034,LOC107739549,LOC107748698 other upstream 9220 16686125 ~ 16692945 (+)
fbxl6 eppk1,fbxl6,LOC107748699,LOC107739550,LOC107656638,LOC107697067,LOC108441690,LOC107697086,LOC107748700,LOC107592036 other upstream 30980 16567727 ~ 16671185 (+)
ccdc126 ccdc126,LOC107656662,LOC107593617,LOC107592015,LOC107739571,LOC107688383 other upstream 763345 15935260 ~ 15938820 (+)
LOC122323320 NA other upstream 822898 15878125 ~ 15879267 (+)
hoxa5a hoxa5a,LOC107654773,LOC107592096,LOC107710354,LOC107688408,LOC107602374,LOC107748660 other upstream 925381 15774672 ~ 15776784 (+)
LOC122323322 NA other downstream 180327 16884079 ~ 16885971 (+)
LOC122324116 NA other downstream 192120 16895872 ~ 16900069 (+)
trnap-agg_23 NA other downstream 196639 16900391 ~ 16900462 (+)
trnap-agg_24 NA other downstream 197737 16901489 ~ 16901560 (+)
pip5k1aa LOC107748713,LOC107565582,LOC107599553,LOC107739532,LOC107656623,LOC107693396 other downstream 354704 17058456 ~ 17068269 (+)

Expression


Co-expression Network