G133771


Basic Information

Item Value
gene id G133771
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 16550387 ~ 16551085 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU197562
TGTTATTCGAAGGGTTTGGTTAGTCCGATTAAAGCttaaaggaaggaaggaagttaaaataaaattgacgGGTTTTTTTAACGGCAGATATTCTTTCAAACTATGATTCAATAACCACAAAAGTTAGATTACAAGTTAGTGTACTAAATAGACGCCAGCAAACGGTCGCGTTCGCCTGAGGAggtcaccatagcaacagtaGGCTGCTTGAACTCTTTCCGTTAGGATTTGTATGGGACGGTACGTCGACCAAACATAAGCACCGCCACAATTTGTGGCTTTCAATACATGTACGCACAGCAAGtatatcacaaaaaaagtgttttaaaagttttcacgttttaaatgttgtattacggaaaaaaaactattcggTTTCGTGAGAGGAGCCGGCGTAGAACGCGTTTGAAATCGCCAGAGTTGCACGAGGAACGTCAAGAACGCAGTAGAATTATTCGCACACTGTTTAGAGTATGTTGGCAGCAAACACCGTtcgttctgttctgttctcgGACGGTCCGTCCGCTCTTCGCTCACGCCGAGGACGCATCCTCCATAGTTCATCCGTTTCAAAACTATGCGCGTTCCTGCGGAATCCAGAGTCCCGTAAGGTGCGTGTCTTCGTGTGGGAGCTGAACTGAAACGGGCGTTCGCTGATTTTCTGCTGCAAATGCGCGTGTAAACCCCAGCAGAAGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197562 True 699 lncRNA 0.45 1 16550387 16551085

Neighbor

gene id symbol gene type direction distance location
znf516 znf516,LOC107696949,LOC107592028,LOC107688320,LOC107563696 coding downstream 57661 16456613 ~ 16492726 (-)
ngly1 ngly1,LOC107748685,LOC107696895,LOC107739561,LOC107688325,LOC107579448 coding downstream 431208 16114281 ~ 16119179 (-)
satb1a satb1a,LOC107739638,LOC107593608,LOC107688330,LOC107748681,LOC107656649,LOC107592069 coding downstream 508423 16035473 ~ 16041964 (-)
tbc1d5 tbc1d5,LOC107748680,LOC107656654,LOC107688331,LOC107739565 coding downstream 516875 16011844 ~ 16033512 (-)
dazl LOC107656655,LOC107592019,LOC107593610,LOC107739568,LOC107688400,LOC107748682 coding downstream 539074 16006305 ~ 16011313 (-)
si:ch73-196l6.5 si:ch73-196l6.5,LOC107748759,LOC107697203,LOC107592102,LOC107563699,LOC107656579 coding upstream 99644 16650729 ~ 16654802 (-)
slc52a2 slc52a2,LOC107656640,LOC107739551,LOC107748697,LOC107592033,LOC107697026,LOC107563698,LOC107748696,LOC107697021,LOC107656639 coding upstream 104127 16655212 ~ 16663534 (-)
eppk1 eppk1,LOC107656638,LOC107748699,LOC107697067,LOC107739550,LOC107592034 coding upstream 116877 16667962 ~ 16681330 (-)
pleca LOC107748698,LOC107697034 coding upstream 135040 16686125 ~ 16772130 (-)
eif3eb eif3eb,LOC107748702,LOC107592037,LOC107656637,LOC101483159,LOC108249253 coding upstream 223540 16774625 ~ 16783225 (-)
LOC122323515 NA non-coding downstream 1561 16545998 ~ 16548826 (-)
LOC122323712 NA non-coding downstream 217486 16321710 ~ 16332901 (-)
G133587 NA non-coding downstream 423679 16124310 ~ 16126708 (-)
G133564 NA non-coding downstream 448405 16005112 ~ 16101982 (-)
G133570 NA non-coding downstream 525649 16017527 ~ 16024738 (-)
G133772 sall3,sall3b,LOC107696994,LOC107592031,LOC107739555,LOC107656642,LOC107563697 non-coding upstream 6356 16557441 ~ 16558450 (-)
G133774 sall3,sall3b,LOC107592031,LOC107696994,LOC107563697,LOC107656642,LOC107739555 non-coding upstream 8332 16559417 ~ 16559831 (-)
G133775 sall3,sall3b,LOC107696994,LOC107592031,LOC107739555,LOC107656642,LOC107563697 non-coding upstream 9021 16560106 ~ 16561976 (-)
G133783 NA non-coding upstream 20516 16571601 ~ 16602536 (-)
G133812 NA non-coding upstream 148604 16699689 ~ 16699907 (-)
mbpa mbpa,tshz1,LOC107563706,LOC107748691,LOC107592027,LOC107739558,LOC107696938,LOC107688322,LOC107593600,LOC107592029,LOC107696978,LOC107739556,LOC108429099 other downstream 41792 16280957 ~ 16508595 (-)
npy LOC107592012,LOC107748754,LOC107656665,LOC107688404 other downstream 626102 15922223 ~ 15924285 (-)
evx1 evx1,LOC107688412,LOC107602371,LOC107710323,LOC107654696,LOC107748750,LOC107592093 other downstream 810058 15736947 ~ 15740329 (-)
G133373 LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391 other downstream 889667 15659919 ~ 15660720 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other downstream 901808 15644862 ~ 15648579 (-)
G133834 pkhd1l1,LOC107592039,LOC107748704,LOC107739541,LOC107656576,LOC107563710 other upstream 305894 16856979 ~ 16869564 (-)
LOC122323321 NA other upstream 331902 16882987 ~ 16883480 (-)
G133842 NA other upstream 335375 16886460 ~ 16887000 (-)
LOC122324114 NA other upstream 338744 16889829 ~ 16890874 (-)
LOC122324112 NA other upstream 340607 16891692 ~ 16892581 (-)

Expression


Co-expression Network