G133865


Basic Information

Item Value
gene id G133865
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 16974031 ~ 17041793 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU197725
TGGGGTTCAGTGACAGTAAAAATCATggtctttatttataaaaaaaaaaaaaaaaaaaaaaacaaaaatttttttggGTATCGTTACACAAGACACAGACAGTAACAAAGTGATTACACATCATTGTGGGCTTTTTCCAGTTAAAATTATGTATTCACCCCTTTCGATCTTTATACTATTAAGTGTTACATATCGCTCCCATTTACTGTGTTCATAATACATATTTAGATCTGCACGGCTTTTGGACCTTTTGAATCTGGCAGTGCCACTGCTTTGAactcactgtaaaaaaaaaataaaataaaatttcaaccTTTCTTCCCTGGGTAGAATATGGCTccttaaagcaaataaaactgaGGAACAACAAAACAGGCCACCTGAAGAGACCACGAGTTGGTCTCCTCTGCTCAAAAGATGTCCATCATAAGCCCATAACAGTGCAGGATATCAAATAGTGGTTTGCAAAGTAAAGTTGTGTGTTAAAATGCAGAGGGATTAAACCCCAAAAAAAGAACGCATATATTACTCAAACTCCAACTGGAagcaaatgcttttaataataaaaaaacaaaaaggtccTCGCGGCATTGTTGTGCATACTGTTACAGACCACATGATGTGGTTTTGGTCCCAAAACCTGTGACGCCGACAAACAGGCAGCAGAAACTTGTGCAGGACGTAGAGTGTAAAGAGGTAAGAGGAGAGCAGTGGATCAGGCTCCAACAAGACCAGCAAAAAACAtcttgtgtcacatgatcatcaGGGGAAAAATGCATCTAAAGCCAAGCTGAGACTGGCTGTTATGGCACAAAATGTTACGTAATCAGCatacagtaaaatgaaaaatatttattgagacTTTTGGCTGACGTGTGGAAAAAAACTTGCCACAATCGTAAAGCTCTGGTCAAGAACCAAAGCAACAAACCGCTACCCTAAGGTTAGCATATACAATTTGACACTTTAGGAATACCATAGTAGATCATTCCTGAAATCACTTGGGATTTTCTGAGGAGATGAGCAGTGAAGCTTAATAAGTGCTCCTGAAAGATTAAAGTCGGTTTGAAACATCGAGAGGCACCACATTTTTGCTGGTTGGCTTGGTGAGACCGTCCTCcagcaggagaaaaaaaaagaagaaaagaaatgggaaacagaaaaacagaagaatCAGATGTGCAGAGACAAAGAAACCAAACGAGATGAGGGTGTCAGGAAGGGAAGAAGAGGCTTTATTCCTGCTCCGGGTCTTCCTTAGAAACTATTGAGCTCGCTCAGGGTCTGGTCCAAAGTGGCATGGATCTTGATGTTCTCTTCTTTAGCATCTCTCAGTTTctctgcaatgaaaaaaaaaaaaaaaaaaacattaaaaaaaatatcttcttatTTTTCCGGCCTCAATAATAGAGTATACCTCATGCTTGTGGTCTTGGACAAGCATTCAGATCTGCGTTTGCATATTTCCGTAGGTTTACGGCCATTTAGATGAATACATTCACTTGAACTCAAAACCACACAGATTGAACCACTCACCAATATACTGAGGGGTTCCCCCTAAACTCTTATACTCTTCTCCTTGAATGAAGCGATGAGCCATGCCGAAATCAATGATCTTGATGTCTGGATGGGGAGCGTGTTTGTCCGACAGCATGATATTTTCTGGCTGAAGAACAAGGAGCAGGATAAGAACATGCCTTTTGCCTTATACACAACTAGcttgtacagtttttttaaacccGTGTTCAAATTCATCCTAATATTTTTAGGTCAGTGAAATGCTGGTTTGATTTCTTAGTATAGATggataacaaatatatataaaaaagtattacgTTCGAAGTGCCGAATTTATTTTGGTCAGAGGCGACAGCTTGAGTGAGAAAGGTAGAGTATACTTCCTCATTACCCTTTTGAGATCTTTATAGGAAGTGACAGGTTCGCAACACAGAGTCAAAATTAACTTTCGAAGGTCAGTTGAAACTGTGCATGTGGTTGATTGGTTTGGTTTTCTGACTTCCATGGAGGCTGGCGTAAAAATCTTCCTACCTTCAGGTCAAAATGGGCAACGTTTTTTTGGTGCATGTAGCTGACTCCTTCCAGAATCTGCTTCATGAACTCAATGGCTTCCGTCTCTGTGAGGTTTTCTTTCTCAGCGATGAAATCAAAGAGCTCACCACCCTT

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197725 True 2184 lncRNA 0.39 2 16974031 17041793

Neighbor

gene id symbol gene type direction distance location
si:ch73-109i22.2 LOC107748764,LOC107667791,LOC107739537,LOC107656629,LOC107599558,LOC107579479,LOC107565563 coding downstream 7916 16959151 ~ 16966115 (-)
grb10a grb10a,LOC107667783,LOC107739542,LOC107565574,LOC108440880,LOC107656633,LOC108273075,LOC105905327 coding downstream 29508 16901770 ~ 16944523 (-)
nudcd1 nudcd1,LOC107697115,LOC107563704,LOC107739547,LOC107748703 coding downstream 142284 16814826 ~ 16831747 (-)
LOC122323461 LOC107592103,LOC107697214,LOC107656599,LOC107748761,LOC107563715,LOC107739630,LOC100537369 coding downstream 177511 16793249 ~ 16796520 (-)
eif3eb eif3eb,LOC107748702,LOC107592037,LOC107656637,LOC101483159,LOC108249253 coding downstream 190806 16774625 ~ 16783225 (-)
msmp2 si:ch1073-70f20.1,LOC107748766,LOC107565577,LOC107693399,LOC107656628,LOC107599557 coding upstream 182 17041975 ~ 17042989 (-)
si:ch73-347e22.8 NA coding upstream 6746 17048539 ~ 17051619 (-)
si:ch73-347e22.4 LOC107693273,LOC107748715,LOC107565585,LOC107739595 coding upstream 30538 17072331 ~ 17083543 (-)
apoea apoe,LOC107565590,LOC107748767,LOC107656622,LOC107739531,LOC107599552 coding upstream 42117 17083910 ~ 17085916 (-)
apoa4a apoa4a,LOC107693394,LOC107599550,LOC107748768,LOC107739627 coding upstream 45630 17087423 ~ 17088750 (-)
LOC122323645 NA non-coding downstream 91619 16867857 ~ 16882412 (-)
LOC122323643 NA non-coding downstream 106679 16854238 ~ 16867352 (-)
G133812 NA non-coding downstream 274124 16699689 ~ 16699907 (-)
G133783 NA non-coding downstream 371495 16571601 ~ 16602536 (-)
G133775 sall3,sall3b,LOC107696994,LOC107592031,LOC107739555,LOC107656642,LOC107563697 non-coding downstream 412055 16560106 ~ 16561976 (-)
G133886 NA non-coding upstream 14308 17056101 ~ 17056311 (-)
G133887 NA non-coding upstream 14632 17056425 ~ 17056867 (-)
G133861 slc9a3.2,LOC107656591,LOC107739626,LOC107693290,LOC107748744,LOC107599577,LOC107565571 non-coding upstream 85873 17127666 ~ 17131995 (-)
G133902 NA non-coding upstream 122039 17163832 ~ 17164115 (-)
LOC122323277 NA non-coding upstream 122901 17164694 ~ 17168108 (-)
trnap-ugg_15 NA other downstream 73255 16900705 ~ 16900776 (-)
LOC122324115 NA other downstream 75430 16897995 ~ 16898601 (-)
LOC122324113 NA other downstream 76888 16896108 ~ 16897143 (-)
LOC122324112 NA other downstream 81450 16891692 ~ 16892581 (-)
LOC122324114 NA other downstream 83157 16889829 ~ 16890874 (-)
LOC122323474 LOC107589464,LOC107589461,LOC107656564,LOC107739585,LOC107599573,LOC107656565,LOC107739586,LOC107599590,LOC107693268,LOC107739622,LOC107589465,LOC107724065,LOC107656563 other upstream 172168 17213961 ~ 17218790 (-)
G133949 NA other upstream 241539 17283332 ~ 17284744 (-)
G133948 LOC107693373,LOC107724108,LOC107739520,LOC107599537 other upstream 288904 17330697 ~ 17334234 (-)
LOC122324164 LOC107589398,LOC107693356,LOC107724088,LOC107589397,LOC107599520,LOC107665487,LOC107724089 other upstream 571653 17613446 ~ 17616277 (-)
s100a10a s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278 other upstream 887896 17929689 ~ 17935436 (-)

Expression


Co-expression Network