G134272


Basic Information

Item Value
gene id G134272
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 17789027 ~ 17789326 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU198296
CGCTGTTTCAGAGTCAATTGGCGAAGTGTCTAGTTTCTTGGTTTCCATTCAGCATGTGAATTTTAATCCACATCTGGTCAAGACTAAAGTCAACGTGCTAAAATAATTGTATGTGGAGCACTTTGTATCCTAGCAGCAGCTGCAGAAACTTTATTATCTGAGAAAGCAACCAGGTCAAACTTTCAATAACATGAAGCGAAAATGTAAATCTAAGTTTTATGAAAGAGAACAAAGATCCGTGTGTTGCGCGTCTGGGGGGCAGTGgtatatttgtgtgttgtgAGGTATCATATGACTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198296 True 300 lncRNA 0.40 1 17789027 17789326

Neighbor

gene id symbol gene type direction distance location
scamp3 scamp3,LOC107724082,LOC107693344,LOC107656474,LOC107599508,LOC107739575 coding downstream 928 17780819 ~ 17788099 (-)
rnf115b si:ch211-81a5.1,LOC107656472,LOC107724083,LOC107599565 coding downstream 9871 17772595 ~ 17779156 (-)
ash1l ash1l,LOC107693346,LOC107739498,LOC107656475,LOC107724081,LOC107599509,LOC107589474 coding downstream 19240 17741746 ~ 17769787 (-)
lrrc71 lrrc71,LOC107739500,LOC107656478,LOC107724080,LOC107693350,LOC107577895 coding downstream 48012 17736186 ~ 17741015 (-)
setdb1a setdb1,LOC107724106,LOC107589406,LOC107693347,LOC107739578 coding downstream 53617 17721000 ~ 17735410 (-)
crabp2b crabp2b,LOC107724072,LOC107589501,LOC107656471,LOC107599588,LOC107739613 coding upstream 3033 17792359 ~ 17794960 (-)
snx27a snx27a,LOC107750804,LOC107599501,LOC107678803,LOC103472691 coding upstream 127174 17916500 ~ 17929196 (-)
efna1a efna1a,LOC107678802,LOC107693333,LOC107739488,LOC107750807,LOC107589415,LOC103043830,LOC108437910 coding upstream 180158 17969484 ~ 17982455 (-)
efna3a efna3,efna3a,LOC107750808,LOC107739487,LOC107693331,LOC108272373,LOC108437928 coding upstream 241983 18031309 ~ 18101591 (-)
LOC122323324 NA coding upstream 401667 18190993 ~ 18220415 (-)
G134247 NA non-coding downstream 118333 17598064 ~ 17670694 (-)
G134252 NA non-coding downstream 143394 17620174 ~ 17645633 (-)
G134245 LOC107599519,LOC107739505,LOC107665494,LOC107724097,LOC107693358 non-coding downstream 194703 17589996 ~ 17594324 (-)
G133970 znf865,LOC107724093,LOC107589382,LOC107656606,LOC107599536,LOC108439897 non-coding downstream 443811 17325331 ~ 17345216 (-)
G133951 ccdc106b,LOC107656610,LOC108273335,LOC103027983 non-coding downstream 499647 17287667 ~ 17289380 (-)
G134273 mrps21,LOC107739612,LOC107656470,LOC107724074,LOC107599587,LOC107589503 non-coding upstream 225 17789551 ~ 17798825 (-)
G134299 celf3a,LOC107693341,LOC107739496,LOC107589410,LOC107750801 non-coding upstream 62846 17852172 ~ 17857186 (-)
G134298 NA non-coding upstream 79805 17869131 ~ 17871956 (-)
G134309 trim46b,LOC107678799,LOC107599500,LOC108241966 non-coding upstream 149621 17938947 ~ 17947834 (-)
G134317 NA non-coding upstream 176249 17965575 ~ 17966539 (-)
LOC122324164 LOC107589398,LOC107693356,LOC107724088,LOC107589397,LOC107599520,LOC107665487,LOC107724089 other downstream 172750 17613446 ~ 17616277 (-)
G133948 LOC107693373,LOC107724108,LOC107739520,LOC107599537 other downstream 454793 17330697 ~ 17334234 (-)
G133949 NA other downstream 504283 17283332 ~ 17284744 (-)
LOC122323474 LOC107589464,LOC107589461,LOC107656564,LOC107739585,LOC107599573,LOC107656565,LOC107739586,LOC107599590,LOC107693268,LOC107739622,LOC107589465,LOC107724065,LOC107656563 other downstream 570237 17213961 ~ 17218790 (-)
trnap-ugg_15 NA other downstream 888251 16900705 ~ 16900776 (-)
s100a10a s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278 other upstream 140363 17929689 ~ 17935436 (-)
G134318 NA other upstream 221556 18010882 ~ 18011399 (-)
si:dkey-266f7.5 NA other upstream 380197 18169523 ~ 18188029 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other upstream 436283 18225609 ~ 18241613 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other upstream 898023 18687349 ~ 18691249 (-)

Expression


Co-expression Network