s100a10a (s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278)


Basic Information

Item Value
gene id s100a10a
gene name s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 17929689 ~ 17935436 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU198368
aaataagcaaacaagtACAGGCAAAACTATAATATTGTACATTATTCAAGATCACCGGGTCACTAACCAAATTATTTAATAAGcataaacactgaaaaacatttttaaaatatgtaatataatatgcaaacTTATGCGTGTATTTATTACCTTTCTACAATCCTCTCCAGTGTGAGGTTCCTCATGCACTCAGCCAGTCCTCTCTCTCCTAATTCTACATCTCGTCCACAGGGGGCGCAAGGAAAAAGCATGAGCGGTGGTGGGCCTTCCTTTCGCCTGCGGCCTGGGTACGTCCCAGAACCTACACACACAGCGAGATAAACTAAATATATCGACCTGTttatgtgacattgaagacggTGCCTTGTCTTTCTTGTCTCTACACACCTGAGCGCAACAGGCGGTCCACGCGGTCAGACTTGGGCATGGGTCTGCGCATCTGCCGCGGGGACCGCGTGTTGGGGGTGGAAGCGGGCGAGTTGGGCTCCGGCGGGAGCTCGGGCTGGGGATACCCGCTCTGAACCAGCACCTCGGAGGCACACATGAGACACACGCTGTGCAGGCAGGGAAGTATGATAGGCTGCTTCACAATGTCCTTGCACACAGGACACTGCAACTCCTGCTCCATACTCTTCATGTTGGACTGAAAATGAGGAGGAGAACTCACAAAGTTCGCATAACTCATACACTTGTATGCTGTGCTGTAATCAATGCATTGCTCAACTTCCTCTGATAAGACCTTCTCCTGCCCATGGGCTCGGTCATATAAAGTCCTGAGAGAGAGATAGCCAGCATTTCTCAAATTCTTCATTCAGACACTCAAACGCGAGCAGCCATGCCATCCGAGCTAGAGACCGCCATGGAGTCCCTCATCATGGTATTCCACCGCTACGCCGGAAAAGAGGGTAAGAGCGGCACCCTGACCCGCCGTGAACTCCGAACCCTGATGGAGAACGAGCTCTCCGGGTTTCTCAAGtcTCAGAAGGATCCGACTACCATAGACAGAATTATGAAGGACTTGGATGCCAATGGAGATGGCGAGGTGAACTTTGAGGAGTTTGTGTCTTTGGTTGTGGGTTTGTCCATCGCCTGTGAAGCGTGCTATAGGATGCAGTTAAAGAAGACATCCAGCTGGAAATGAAGAGGAATATGATCCGTGCAGATAAACTGCAAAGTCGATCCCGTTGTCTATTAAAATATCTGattgttttttacttttcttttgagTTTGTGTATGTACTTCAGTATCGAatgaaaaccataaaaatgacTTTCGCTGGCAGGTTAAAGTacagtgggtgtgtgtgtgtgacaggtcTTAACGCTCTTTGGCCTACAGACAGCATTCTGTGAGGTTTTAATTGCTGAAACCAAATATGTTCAAACATCTTTCTGTGCtaaactttatattaaaaatgtctatgcGGTTATAACAAGTATGATTCACATCCGACAGTTTTTGCACATTCTCTCTGTTACTCTAAACTTTTACTGGGGTGTGTTCAGAGCTGTTAATGGTTAGAGTGTAAACCCAAGGCTGCTcggatgggaaaaaaaaaagagttgtgaAAGTTAGAACTCAATAAGCCTTCGTCAGAAAAGCGCCTTATTTCATTTGCTGACAAAAACGAAAACAAGGTTGCAAGAGACAAAAATAGTCAATTTAATGGACTTGTACGGTTGCTTAAAAACATACTGAATGTtttcgccaaaaaaaaaaacgccgtGTTGAAAGTTACCAAAGGAACACACACTGAAAGTGATGCATGCgtgcattttactttatttccaATTGATTGAAAGTTCAGACATTTTCAGAGAACGTAAGATGAATagcatttcttttattacagTACACGTCATTAGTCAAGCTCCGGAAACTATTTTTTGCTTCTGTTTAAAGAAACCAGTCATTTTATGGCTTCCTTGTGGTCATGTGATTCTCTGTGTTAGAATTCGGTTAAGCATTTTAGTATCCGTAATATATTACGTTACATGATATGTACTATTACAGCTgttattactaatataataacaataaagataaatgaaaaagaaacaaaaattgcCACAAGACAAATGCGCATGATCAGATATTCAGACCACGGCCAAGTCATCACAGACTTACTTACACGGGGCTTTGCCAAAGTGACTAAATTTCAGAGGGTTGCCCCCTTGTTTGCGCtgctaaaaatacaaacagcaaACCACACCGTCTGCAAAACCAAATAAtcccaaatgcaaaaaaatgttccGTGTGTTTCCTTGTCTGCCACAAGAGGGCAGAGAAGACCCGCGCTAGAGCCATACTATAATATATTGGCATGCAATCTGCatacatgaaaaataatataaaataaaatattggtgTCCACCCTAGGCCTGCCGTGGCACATCATTTGAACTGTGCTAACAAATATCTTTCGCTCTGGATTTATTATtcagttaaacaaaacaaatatctgAACGtggaaaatctaaataaataaataaaataattaatttgcaaatgtttttggtCAGAAATATGACTGCTTg
>TU198369
GAGAACTCACAAAGTTCGCATAACTCATACACTTGTATGCTGTGCTGTAATCAATGCATTGCTCAACTTCCTCTGATAAGACCTTCTCCTGCCCATGGGCTCGGTCATATAAAGTCCTGAGAGAGAGATAGCCAGCATTTCTCAAATTCTTCATTCAGACACTCAAACGGTAAGCTCTTCCTTCTGACGTTTATCCTTTCGAATGCGCCGTAAAGATCGGATCTGTCAGCGTTACATTCATACCAGCTTTCCACAGCGAGCAGCCATGCCATCCGAGCTAGAGACCGCCATGGAGTCCCTCATCATGGTATTCCACCGCTACGCCGGAAAAGAGGGTAAGAGCGGCACCCTGACCCGCCGTGAACTCCGAACCCTGATGGAGAACGAGCTCTCCGGGTTTCTCAAGtcTCAGAAGGATCCGACTACCATAGACAGAATTATGAAGGACTTGGATGCCAATGGAGATGGCGAGGTGAACTTTGAGGAGTTTGTGTCTTTGGTTGTGGGTTTGTCCATCGCCTGTGAAGCGTGCTATAGGATGCAGTTAAAGAAGACATCCAGCTGGAAATGAAGAGGAATATGATCCGTGCAGATAAACTGCAAAGTCGATCCCGTTGTCTATTAAAATATCTGattgttttttacttttcttttgagTTTGTGTATGTACTTCAGTATCGAatgaaaaccataaaaatgacTTTCGCTGGCAGGTTAAAGTacagtgggtgtgtgtgtgtgacaggtcTTAACGCTCTTTGGCCTACAGACAGCATTCTGTGAGGTTTTAATTGCTGAAACCAAATATGTTCAAACATCTTTCTGTGCtaaactttatattaaaaatgtctatgcGGTTATAACAAGTATGATTCACATCCGACAGTTTTTGCACATTCTCTCTGTTACTCTAAACTTTTACTGGGGTGTGTTCAGAGCTGTTAATGGTTAGAGTGTAAACCCAAGGCTGCTcggatgggaaaaaaaaaagagttgtgaAAGTTAGAACTCAATAAGCCTTCGTCAGAAAAGCGCCTTATTTCATTTGCTGACAAAAACGAAAACAAGGTTGCAAGAGACAAAAATAGTCAATTTAATGGACTTGTACGGTTGCTTAAAAACATACTGAATGTtttcgccaaaaaaaaaaacgccgtGTTGAAAGTTACCAAAGGAACACACACTGAAAGTGATGCATGCgtgcattttactttatttccaATTGATTGAAAGTTCAGACATTTTCAGAGAACGTAAGATGAATagcatttcttttattacagTACACGTCATTAGTCAAGCTCCGGAAACTATTTTTTGCTTCTGTTTAAAGAAACCAGTCATTTTATGGCTTCCTTGTGGTCATGTGATTCTCTGTGTTAGAATTCGGTTAAGCATTTTAGTATCCGTAATATATTACGTTACATGATATGTACTATTACAGCTgttattactaatataataacaataaagataaatgaaaaagaaacaaaaattgcCACAAGACAAATGCGCATGATCAGATATTCAGACCACGGCCAAGTCATCACAGACTTACTTACACGGGGCTTTGCCAAAGTGACTAAATTTCAGAGGGTTGCCCCCTTGTTTGCGCtgctaaaaatacaaacagcaaACCACACCGTCTGCAAAACCAAATAAtcccaaatgcaaaaaaatgttccGTGTGTTTCCTTGTCTGCCACAAGAGGGCAGAGAAGACCCGCGCTAGAGCCATACTATAATATATTGGCATGCAATCTGCatacatgaaaaataatataaaataaaatattggtgTCCACCCTAGGCCTGCCGTGGCACATCATTTGAACTGTGCTAACAAATATCTTTCGCTCTGGATTTATTATtcagttaaacaaaacaaatatctgAACGtggaaaatctaaataaataaataaaataattaatttgcaaatgtttttggtCAGAAATATGACTGCTTg
>XM_043218270.1
TCTTCCTTCTGACGTTTATCCTTTCGAATGCGCCGTAAAGATCGGATCTGTCAGCGTTACATTCATACCAGCTTTCCACAGCGAGCAGCCATGCCATCCGAGCTAGAGACCGCCATGGAGTCCCTCATCATGGTATTCCACCGCTACGCCGGAAAAGAGGGTAAGAGCGGCACCCTGACCCGCCGTGAACTCCGAACCCTGATGGAGAACGAGCTCTCCGGGTTTCTCAAGtcTCAGAAGGATCCGACTACCATAGACAGAATTATGAAGGACTTGGATGCCAATGGAGATGGCGAGGTGAACTTTGAGGAGTTTGTGTCTTTGGTTGTGGGTTTGTCCATCGCCTGTGAAGCGTGCTATAGGATGCAGTTAAAGAAGACATCCAGCTGGAAATGAAGAGGAATATGATCCGTGCAGATAAACTGCAAAGTCGATCCCGTTGTCTATTAAAATATCTGattgttttttacttttcttttgagTTTGTGTATGTACTTCAGTATCGAatgaaaaccataaaaatgacTTTCGCTGGCAGGTTAAAGTacagtgggtgtgtgtgtgtgacaggtcTTAACGCTCTTTGGCCTACAGACAGCATTCTGTGAGGTTTTAATTGCTGAAACCAAATATGTTCAAACATCTTTCTGTGCtaaactttatattaaaaatgtctatgcGGTTATAACAAG
>XM_043218271.1
GGCACACATGAGACACACGCTGTGCAGGCAGGGAAGTATGATAGGCTGCTTCACAATGTCCTTGCACACAGGACACTGCAACTCCTGCTCCATACTCTTCATGTTGGACTGAAAATGAGGAGGAGAACTCACAAAGTTCGCATAACTCATACACTTGTATGCTGTGCTGTAATCAATGCATTGCTCAACTTCCTCTGATAAGACCTTCTCCTGCCCATGGGCTCGGTCATATAAAGTCCTGAGAGAGAGATAGCCAGCATTTCTCAAATTCTTCATTCAGACACTCAAACGCGAGCAGCCATGCCATCCGAGCTAGAGACCGCCATGGAGTCCCTCATCATGGTATTCCACCGCTACGCCGGAAAAGAGGGTAAGAGCGGCACCCTGACCCGCCGTGAACTCCGAACCCTGATGGAGAACGAGCTCTCCGGGTTTCTCAAGtcTCAGAAGGATCCGACTACCATAGACAGAATTATGAAGGACTTGGATGCCAATGGAGATGGCGAGGTGAACTTTGAGGAGTTTGTGTCTTTGGTTGTGGGTTTGTCCATCGCCTGTGAAGCGTGCTATAGGATGCAGTTAAAGAAGACATCCAGCTGGAAATGAAGAGGAATATGATCCGTGCAGATAAACTGCAAAGTCGATCCCGTTGTCTATTAAAATATCTGattgttttttacttttcttttgagTTTGTGTATGTACTTCAGTATCGAatgaaaaccataaaaatgacTTTCGCTGGCAGGTTAAAGTacagtgggtgtgtgtgtgtgacaggtcTTAACGCTCTTTGGCCTACAGACAGCATTCTGTGAGGTTTTAATTGCTGAAACCAAATATGTTCAAACATCTTTCTGTGCtaaactttatattaaaaatgtctatgcGGTTATAACAAG

Function

symbol description
s100a10a Predicted to enable calcium ion binding activity and calcium-dependent protein binding activity. Located in cytoplasm and nucleus. Is expressed in several structures, including digestive system; hematopoietic system; integument; intestinal bulb primordium; and sensory system. Orthologous to several human genes including S100A10 (S100 calcium binding protein A10).

NR:

description
PREDICTED: protein S100-A1-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198368 True 2538 TUCP 0.42 4 17929689 17935436
TU198369 False 1968 TUCP 0.40 2 17929689 17931750
XM_043218270.1 False 692 mRNA 0.45 2 17930790 17931575
XM_043218271.1 False 902 mRNA 0.45 4 17930790 17934901

Neighbor

gene id symbol gene type direction distance location
snx27a snx27a,LOC107750804,LOC107599501,LOC107678803,LOC103472691 coding downstream 493 17916500 ~ 17929196 (-)
crabp2b crabp2b,LOC107724072,LOC107589501,LOC107656471,LOC107599588,LOC107739613 coding downstream 134729 17792359 ~ 17794960 (-)
scamp3 scamp3,LOC107724082,LOC107693344,LOC107656474,LOC107599508,LOC107739575 coding downstream 141590 17780819 ~ 17788099 (-)
rnf115b si:ch211-81a5.1,LOC107656472,LOC107724083,LOC107599565 coding downstream 150533 17772595 ~ 17779156 (-)
ash1l ash1l,LOC107693346,LOC107739498,LOC107656475,LOC107724081,LOC107599509,LOC107589474 coding downstream 159902 17741746 ~ 17769787 (-)
efna1a efna1a,LOC107678802,LOC107693333,LOC107739488,LOC107750807,LOC107589415,LOC103043830,LOC108437910 coding upstream 34048 17969484 ~ 17982455 (-)
efna3a efna3,efna3a,LOC107750808,LOC107739487,LOC107693331,LOC108272373,LOC108437928 coding upstream 95873 18031309 ~ 18101591 (-)
LOC122323324 NA coding upstream 255557 18190993 ~ 18220415 (-)
LOC122323394 NA coding upstream 274289 18209725 ~ 18216545 (-)
hax1 LOC107729882,LOC107693320,LOC107589419,LOC107599494,LOC107670002,LOC107753511 coding upstream 306092 18241528 ~ 18244835 (-)
G134298 NA non-coding downstream 57733 17869131 ~ 17871956 (-)
G134299 celf3a,LOC107693341,LOC107739496,LOC107589410,LOC107750801 non-coding downstream 72503 17852172 ~ 17857186 (-)
G134273 mrps21,LOC107739612,LOC107656470,LOC107724074,LOC107599587,LOC107589503 non-coding downstream 130864 17789551 ~ 17798825 (-)
G134272 NA non-coding downstream 140363 17789027 ~ 17789326 (-)
G134247 NA non-coding downstream 258995 17598064 ~ 17670694 (-)
G134309 trim46b,LOC107678799,LOC107599500,LOC108241966 non-coding upstream 3511 17938947 ~ 17947834 (-)
G134317 NA non-coding upstream 30139 17965575 ~ 17966539 (-)
G134319 NA non-coding upstream 82533 18017969 ~ 18018262 (-)
G134334 NA non-coding upstream 332869 18268305 ~ 18269060 (-)
G134332 NA non-coding upstream 354621 18290057 ~ 18303657 (-)
LOC122324164 LOC107589398,LOC107693356,LOC107724088,LOC107589397,LOC107599520,LOC107665487,LOC107724089 other downstream 313412 17613446 ~ 17616277 (-)
G133948 LOC107693373,LOC107724108,LOC107739520,LOC107599537 other downstream 595455 17330697 ~ 17334234 (-)
G133949 NA other downstream 644945 17283332 ~ 17284744 (-)
LOC122323474 LOC107589464,LOC107589461,LOC107656564,LOC107739585,LOC107599573,LOC107656565,LOC107739586,LOC107599590,LOC107693268,LOC107739622,LOC107589465,LOC107724065,LOC107656563 other downstream 710899 17213961 ~ 17218790 (-)
trnap-ugg_15 NA other downstream 1028913 16900705 ~ 16900776 (-)
G134318 NA other upstream 75446 18010882 ~ 18011399 (-)
si:dkey-266f7.5 NA other upstream 234087 18169523 ~ 18188029 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other upstream 290173 18225609 ~ 18241613 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other upstream 751913 18687349 ~ 18691249 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other upstream 941178 18876614 ~ 18933228 (-)

Expression


Co-expression Network