G134411 (oxr1b)


Basic Information

Item Value
gene id G134411
gene name oxr1b
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 18457165 ~ 18460899 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU198531
aaatattatgctacattttaaataaacaatagcacaataaaattaataataattaataagtgcaaaataaattataaaaaataataataggacaaaaaatatgctttcagaaatcataaatGATAGCCACACACTTTTCccctgtaaataaatacagtaatgtgGTAATGAAAAACATTCCCCAGAACGTCTTGCTCTATTTACTTCCAGTTCCAGAAGCCCATCCCTATTAATGCCATTGGATTTAACTCGTAAAAGCAGAAAACACGCTGTATGCAAACTATTCATACACTGCTAAATGTTCTTAACATGCACTTGCAGCCTTCACTACAAAAACAACTATCTTcgactagatttttttttctgacggAGGCGGCATTTTGATTAATAATCGCTACGAGGGGAAAATAAACATAATCGTGCGGTGCCGCTCAAACACTAAAGAAAGGTCCGCAGCGTTTCGCGCCATAAGAGCGTCGAGTTAAAAATACGCTTGCGTTCAAAACAGCGCAGTGGGAACCGTTTCATTATCCGTTTAGCTGTTTGAATATAACAGCGCAAAACTTTTAATAAGGGAGCAGTCCTGAGGCGGCTGTGTGCTGTTGAGTTAGGATGATTTTATCATAGGCTAAAAACAACTGCGTTATGCACGTGAGGATCTACTACATGCAACTGCACACTTAATATAACCATGCTAGGCTATTTCAAAAACGTGTCTGCATACTTTACCGTCATGTCTAAACTACATCAGTTTTCAAGCCTGCTTGGCATGCACCCTATTCAGAGTGCATGCCAAGTGCACTCAAATACAAGTCGCTCagccacacacaaacattacaaCCACAgggcatgtgtttttttttttttttttttttttttaccaggcCAAAGCTGTATTTGGGCGTCAGCTGACATCCCTCCTTAATTCTTCTGGAGAAAAACATCACTTCTGCAGAAAGCCCCGAGATATGCAGGTGTGTATCCGATATTAAGTATCCTCGCGGACTCACGGAGGTACAGACACTCTTAGAAGTGAACTAGAGGCTTTGTGCTGTTTATATCCCAGAGGGACCAATGGGATGGCAGGGCAACAGAAAAGCATGAACTCATGTGGCCTTCCCTCTGGCCTGCCCAGATAAGAGGCTGCACAGGGCTCGagtcatattttataaaaagccAAATAGCTATCTAGaggttataaataaacatgcgcATTTATATAGCCTAGAAAGTATCCTCCAGCGATCCAGCTAAATAAacactaattatttaaaatatttttaataataataataataataataataataataataataataataataataataataataataatcaaaaaatagaattggaaatattaaacataaaaaaaacataataaaatccAAATTCTATAAGTCATATTTTATAAGAGAACTAATAGTTATCTGGAAGATATTTGAGAcaaaaatgcaacaataaaataaaacaaacaacaataaataaataaacagaaaagttaacatatcaataaaaaaaaaaaattcacacttTTTTCACACATgtgaaatgtattgtttatgattttataaatgttttatcttaAACAGTATGTCATTGATATATAGcattaatattattgatattatgaTATTGGTCACTTGATTGGTCACCTGGTACAGGACCTAAATGTACACAAATTAATTGTTGGATCTCAACAAGACATAAACTATCGGACGATTAGCTATCATATCTTCTTTATCTCCTTCATTAAATGTTTACAGTGATTATCCTTGactaataaaagaaatgaaaaagcacGGATAGTCTTGCTCGCTGGAGTCCTTAAGTGGTTTAAGAGGGATGATGAAATGATCGTGTCCGTTTGCAGATGTACACTCAATACAGCAACAGCCAGACAAGCATTACGATGAAAGGACGTTACATACCAGTTCATCAGATCCTTTGGAGGGAAAAGATGTCATTATGAGAAAAAGACGCTGCAACGAGACATTACATGGACACTGACAATGACTGGCAACGGGAACAAGCATGCATTCATACTTCATTAGTATATGTGCACAAACATGGTTGAAGCTGCTGAAGAGGACATGAACTCtgaaagagacaaacacacacacacacacacacacactccagtgcTTCTGTGAATAACAGGCTCGTGTGTTCAGAAGAGAACATAAACATCATGTAAGAAGCATATTCGTGATCACATGTCTATGATAACACAACTGCAACAAAGACGTCAACATCAAAGCAACGCAACTCAAAATGCATGGATTAACGTAAGTATTACCGTTTATGACAATCAAATAGGCACACGCACTACAAATCAGTCAAATAGTCTCATATAATTCATCATTATCTAAGGCGTAATATATAGTCTAGGCTGGTATTTTTGGAGTTTAGGTGAAGACTCACAGCAGTTATTGTTCATACCTCCCAGTCCTTGAATGTGATATCAGGCACTGGTTTGTCGTGCTCCCCGCTTTCAGCGTCCTGGTTCTTTTTGACCACTACAAACCCGGGCTCCCGCGTCAGTCCACCCAAACCTTCTCCATACACATCAGGGGTCCACTGGACAAAGAACCCATACAGGTGGTCCGACctaGATTGCTCCGTTCAATTTATAATGGTCTATGTCAACAGCATCGTATAGGTGATTACAGCATGTTGACAGCGACGAAACCTTGTCC

Function

symbol description
oxr1b Predicted to be involved in response to oxidative stress. Predicted to be active in nucleus. Is expressed in central nervous system; head; lateral line ganglion; and olfactory pit. Human ortholog(s) of this gene implicated in cerebellar hyplasia/atrophy, epilepsy, and global developmental delay. Orthologous to human OXR1 (oxidation resistance 1).

NR:

description
oxidation resistance protein 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198531 True 2705 lncRNA 0.37 2 18457165 18460899

Neighbor

gene id symbol gene type direction distance location
naxe apoa1bp,naxe,LOC107753479,LOC107693306,LOC107669985 coding downstream 33473 18420659 ~ 18423692 (-)
sf3b4 sf3b4,LOC107669988,LOC107716574 coding downstream 40862 18414224 ~ 18416303 (-)
mindy1 fam63a,LOC107559718,LOC107669987,LOC107693308,LOC107589430,LOC106569905 coding downstream 53419 18394006 ~ 18403746 (-)
mrpl24 mrpl24,LOC107669969,LOC107559719,LOC107693309,LOC107580210 coding downstream 73986 18381451 ~ 18383179 (-)
prcc LOC107753464,LOC107693312,LOC107589427,LOC107670020,LOC107716568,LOC107577543 coding downstream 76599 18376016 ~ 18380566 (-)
sqleb NA coding upstream 7079 18467978 ~ 18471674 (-)
recql4 recql4,LOC107589489,LOC106570431 coding upstream 21755 18482654 ~ 18493910 (-)
limd1b LOC107578185,LOC107669936,LOC107716566,LOC107753472,LOC107693300,LOC107731694 coding upstream 33201 18494100 ~ 18495558 (-)
clec3bb NA coding upstream 45796 18506695 ~ 18511505 (-)
exosc7 exosc7,LOC107693297,LOC107670021 coding upstream 50751 18511650 ~ 18514678 (-)
G134365 LOC107726654 non-coding downstream 39312 18417026 ~ 18417853 (-)
G134332 NA non-coding downstream 153508 18290057 ~ 18303657 (-)
G134334 NA non-coding downstream 188105 18268305 ~ 18269060 (-)
G134319 NA non-coding downstream 438903 18017969 ~ 18018262 (-)
G134317 NA non-coding downstream 490626 17965575 ~ 17966539 (-)
LOC122324145 NA non-coding upstream 62301 18523200 ~ 18532017 (-)
G134426 NA non-coding upstream 72274 18533173 ~ 18533500 (-)
G134428 NA non-coding upstream 111169 18572068 ~ 18586326 (-)
G134504 NA non-coding upstream 371333 18832232 ~ 18832849 (-)
G134592 NA non-coding upstream 586622 19047521 ~ 19057963 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other downstream 215552 18225609 ~ 18241613 (-)
si:dkey-266f7.5 NA other downstream 269136 18169523 ~ 18188029 (-)
G134318 NA other downstream 445766 18010882 ~ 18011399 (-)
s100a10a s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278 other downstream 521729 17929689 ~ 17935436 (-)
LOC122324164 LOC107589398,LOC107693356,LOC107724088,LOC107589397,LOC107599520,LOC107665487,LOC107724089 other downstream 840888 17613446 ~ 17616277 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other upstream 226450 18687349 ~ 18691249 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other upstream 415715 18876614 ~ 18933228 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other upstream 1081883 19542782 ~ 19652807 (-)
LOC122324012 NA other upstream 1209888 19670787 ~ 19688386 (-)
G134895 NA other upstream 1921121 20382020 ~ 20382727 (-)

Expression


Co-expression Network