G134757 (LOC107665134)


Basic Information

Item Value
gene id G134757
gene name LOC107665134
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 19924705 ~ 19969715 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU199083
tgacatttttatttgttaaaatttttttattgcatttaattgatcaaaagtgctacaaaaaaagtctttttaactttctattcatcgaAGAATACAGAAAAGCAGCACAATTGCTTTCAGTATTGATAACAGTAAAAGGAAATGGACAaagaggatcatgtgacattttttttaaggatcatgtgacatttgAAGATGGGAGTAAATGATCCTTacgaaaaaaataataatttcagttttGGGTAGCCTTCATCACTTTCAAAGAATGGATCCGCACTCGCTCCATCTTCTCAATGACTTAATCCCTTCTCTCTGTAGCAATTGTGACACTAATATaacgtttttactgtattttggatcaattAATCACAGCCTTGTTTACTGTACAAGCACAACAAAGCCataaaaaacaagtaaaataagGCAAGTACTGTATATTGATTTTGCAGTAATGTTTCTCACCTTCCACCACTTGGAGACATTTGCACCTAATGCACTGTTGGTGCTGTTGAGCAGAAGTGGAATGTTGGGATTGTAACGCTCACTAAACCAGTTACTATTTCCTCCGTCCGCCACACAGATACTGCACGCGCACGGCACTTTCTTGGAGACGAAACCGTAAGAGCTGTAGTTGAAAACCAGCACAGAGCTTTGAAAGTACAGAAGTACCAAGATGGTAGTGGAGCTCAGGAGCGCAGTCCTGTAGCGTCGGTGCTTCAGTAGGAAAACCCACATCCTTATATCAGCGAGTTTTGAGGCTTTGGTCACTTCAGACAGAAATATAATAGATCTACAGAGGGAAAGAGAACGAGAGAGTGGTTTATATGGAGATGCAGAAGAGACATTACAGTTACGAATGCAATCACTccactataaaatataatgttgtgactgaaaaaaaacaaaccatagAAACCGTGTGGGTCTCTACTTGTCCCCTTTTATTGGAATATGTCCCAAAACACTACCTGAAACCATTTTAATGGCTAATAGTTCatggtttttaatgtaattgtatttgtagtggtaacctttttttctaGCAGAGACAGCAAACcataaaccaataaaaatgtagaatcTAAAAGGGAG

Function

NR:

description
PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199083 True 1092 lncRNA 0.37 2 19924705 19969715

Neighbor

gene id symbol gene type direction distance location
st3gal1 LOC107665130,LOC107727731,LOC107549887 coding downstream 209801 19703796 ~ 19714904 (-)
LOC122323475 LOC107669946,LOC107554574,LOC107727308,LOC108274547 coding downstream 516053 19380778 ~ 19408652 (-)
rragcb rragcb,LOC107669953,LOC107727266,LOC107551762,LOC107681629,LOC107700741,LOC107730935 coding downstream 835922 19081572 ~ 19088783 (-)
fhl3b fhl3b,LOC107734040,LOC107551770,LOC107681628,LOC107669956,LOC107727270 coding downstream 844028 19063845 ~ 19080677 (-)
stpg1 stpg1,LOC107669955,LOC107734031,LOC107559684,LOC107727365,LOC107681611 coding downstream 890401 19029360 ~ 19034304 (-)
chd4a chd4a,LOC107748913,LOC108433757,LOC107549834,LOC107086130 coding upstream 35580 20005295 ~ 20029751 (-)
tpi1a tpi1a,LOC107754015,LOC107666351,LOC107665177,LOC107727722,LOC107563024,LOC107549875,LOC103040446 coding upstream 76851 20046566 ~ 20052298 (-)
gnb3b gnb3b,LOC107665150,LOC107727720,LOC107753988,LOC107666347,LOC108433753,LOC107563025 coding upstream 84554 20054269 ~ 20058841 (-)
stx1b stx1b,LOC107666328,LOC102220115 coding upstream 114467 20084182 ~ 20121636 (-)
prf1.3 NA coding upstream 153830 20123545 ~ 20127676 (-)
G134760 NA non-coding downstream 35877 19888620 ~ 19888828 (-)
G134758 NA non-coding downstream 78346 19845896 ~ 19846359 (-)
LOC122324126 NA non-coding downstream 396002 19497954 ~ 19528703 (-)
G134675 NA non-coding downstream 431673 19492535 ~ 19493032 (-)
LOC122323683 NA non-coding downstream 503233 19414899 ~ 19421472 (-)
G134761 NA non-coding upstream 74205 20043920 ~ 20056860 (-)
G134804 LOC107727707,LOC107665118,LOC107549831 non-coding upstream 171794 20141509 ~ 20141876 (-)
G134809 si:dkeyp-113d7.1,LOC107727714,LOC107665141,LOC107549870,LOC108438414,LOC107563030 non-coding upstream 184617 20154332 ~ 20154890 (-)
G134816 NA non-coding upstream 217505 20187220 ~ 20188695 (-)
G134815 LOC107729882,LOC107693320,LOC107589419,LOC107753511,LOC107599494,LOC107670002 non-coding upstream 219074 20188789 ~ 20190143 (-)
LOC122324012 NA other downstream 236319 19670787 ~ 19688386 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other downstream 271898 19542782 ~ 19652807 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other downstream 991477 18876614 ~ 18933228 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other downstream 1233456 18687349 ~ 18691249 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other downstream 1683092 18225609 ~ 18241613 (-)
G134895 NA other upstream 412305 20382020 ~ 20382727 (-)
G134944 LOC107756202,LOC107600825,LOC107689598 other upstream 479838 20449553 ~ 20451196 (-)
G134948 zgc:162872,LOC107756215,LOC107692254,LOC107600823 other upstream 493234 20462949 ~ 20468681 (-)
G134949 LOC107670072,LOC107756217 other upstream 500505 20470220 ~ 20473163 (-)

Expression


Co-expression Network