G134836


Basic Information

Item Value
gene id G134836
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 20209062 ~ 20212587 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU199224
cttcttttgaaatTTGGTATGGGTTGAATAGTTGAAATGGTCAGTTTTCTGATATGCAAGCACCCGTGTGGATGAAACGtgatattttgaacaaaaacattacaacgTTAATGTAGcccaaacattttattgagactgagacagagagaaaaagagacactAGGTTGGAGGGTGTTCCTGTCAGTTCTTCAGCCCTCTGCGGGTGATTGGATCTACTTCATCTCTTGCTTGTGATAATCAGGCAGCTGTCACTGAGGCTGGTCcgtctcctccctctctctctttccctctctatCCAATGAAGCATCCagaaaacatcttaatgctgcTTCCTTCTGAAGGAACACCCTggagaaatcaaaataaaaatagaggTTGTTATCTCAAACAACAGCTAAGCTCATTAAcaacaaatgcatgaatgtcaCCCCACAGTGACTtcaaacatttggaaaaaagcacacattctgtttttgcctttttttctttttaaaaaagtgagcTTTCATTTgtgcatcaaaaaaaacaaagacactggTTGAGCCAATGTTCAAATACGCAGGTctaataaatctattaaaaaggATAATTAACAAACCAATATCTTATTTATAGTTGTCTATACATAAATGAAGTcactttaacataaaaaaaaactacatccTTCACCTTTAAACAGaccaatgcatttatttgcttattgcAAATGAATATTTGCTCCTGCTAGCAAAAACCACGTTTAGTGGTCCAAAGCCGCACAATGACGTCAATCATCCATATGAAATATAGCTGAACATCTGTTAACATCTGAATCAGAAAGACTATAATATGCTGTAGACCTGTCACAACAATGAATATATTATGAATGTTCAGAAAACCTCTGAATTGCTGCAAGAGTCACAGATTATGAACGAATCGGTTTATCAGCTTTGTATCAAGTGATGGCTAAATTCCCAATGATGACTGCGAATGCTGTCATACTCGATGAGGAATTACTTGAATCTATCATAAACTGAAGTCAGAGCAAAATAATGTTTGCACCAGTCAGCAGCTACAGACAAACTACTATCTGCAGAGTTCATTTCAGTGATATTCAGAATACAGTGCTAGTGTTTATCTACGTGGCAGCATCACAGAGCTTCCAGCATCAGAAGTACAACTCAGTGtaagcaaaaacacaaatttccATTCAAATGACTGCACTAAATTACAATATCCATCCACTGCAAAATTATGACTTGAATCAGCTAATGAATATCAATGAGTGCTCAAAAATCTCCTTTTCAAACGGTCGGCTAGGTTTATGCATCATTACTTGCATCCACAGGCGGCATACAATTACCATTCTTCTTCAACATCTTCATTCAACATttttcctttattattattatttacattattatatcaCTATTGTAACTATACTATTGTactgcaaaaaaagcatttaattccAAATCTATTTACAGAAcagtacaattaaaatatatatggaaGCTCTAGTATCAAAACCATTGAAGATATTTGATagaaatacatgcattttaaaaagcatttcaaactattatttgtgttttttatgtcaGATTTTTGGCACATCCCTgattctttatatatacatacacacacacacacacacacacacatatatataacttCAATAACTCTATGGCTACCAAACTGCTTACAGTTTTATTTCTCCATTTCACTGTTGCACCTACACACACCTGAGactgagcaaaaacacaaacaaaccttCTGTGAGTCGAGCTTTGCCTCCGGTGGGCTGACACAGGACGGTTGAGCAACCGACACAAAGCACGACTGTCTGTGCGTGGCTGAACACCGTTGTGATCTTATAACATCCTGAAAACAAGAGAAGCACGATTAAGGCCATTTTGACGAGACCCATCCAATTATCCAGAGACGCGTGAAGGACGCTCACCTGGACACTTGACATCCATGAAATAAGAATTGGGACTCTGTACGAGACGCTTCTTCTTGtgcctcctcctctcctcctcggGGGTCGGGTGCAGCAAGTCTTTTGCGAGCTATTTACATAAACAACATGATTCTACATGAGAAAACTGccattaaacacttttttgatCAGCACCTTCACACAAACATCCATCTTATTAGGAGAGCTGCCTATCCAGACAGCATTACTGTAGCATGTCTTAAATATTGTCTAGGTAGGTagataataatgttttgatggAGCCACGCAGAAAGCTTTGCCATTTTCAGTTAATTCTGGCATCGCCAGAAAGCCTCACGACATCCATTTTCAGTCTTAAAGCGATTGCTTGTCTCAAGCGGAGGCGTGAACACAGTTTAACCGCTTTAGAGTATAGTATCACAATATCAGATTATAAAAACGCACGGGCACTTAATCGTGCGTCACATTACTGTTAAACGTCCATGTTTTGTTCTATGCGCGCCGCCATCTTGATGCAGGGCGCGAATCCACGCCGCCGAACCATTCGAGACTCAACGCTTATTTTTACGTTCATCTTCTAGTTTACGTGACAAGGCGTACATTAAGGCCGACCGTAAGGGTACGTTCTTGAACGCGTTCCGATATCTAGGTCTCAATGTCATGTAAGTGGTGTATATGGACATGTTTTTGCTCTCTAGTACTCACTGGCATGTTGGCGAAGATTAAGCCGCTGCCAGAAAGGAAGTTCCAGGCGGAAACAGACGAATATCATCCGACGAGCGAGGCGGGGAGCGGAAGTGAGGCATCGGACGTAGATCGCAGACATGTTAGTAGAGGCAGAGGAGGCCAATAACGGTGATAAAACATCGTTGTTATGATGGCTTTATGTGGAGGGCCTTCTCGAGTACGCTAACGTTCACAGAGTGAGCAGAACCCAGGAGGTGGAATCAAGACTGCTCACTTCCAGCTAATCGTGAGAGACAAGTGTCTGCAGATGTGCCCATCCAGAGACTTCAGGCATCCG
>TU199227
cttcttttgaaatTTGGTATGGGTTGAATAGTTGAAATGGTCAGTTTTCTGATATGCAAGCACCCGTGTGGATGAAACGtgatattttgaacaaaaacattacaacgTTAATGTAGcccaaacattttattgagactgagacagagagaaaaagagacactAGGTTGGAGGGTGTTCCTGTCAGTTCTTCAGCCCTCTGCGGGTGATTGGATCTACTTCATCTCTTGCTTGTGATAATCAGGCAGCTGTCACTGAGGCTGGTCcgtctcctccctctctctctttccctctctatCCAATGAAGCATCCagaaaacatcttaatgctgcTTCCTTCTGAAGGAACACCCcttCTGTGAGTCGAGCTTTGCCTCCGGTGGGCTGACACAGGACGGTTGAGCAACCGACACAAAGCACGACTGTCTGTGCGTGGCTGAACACCGTTGTGATCTTATAACATCCTGAAAACAAGAGAAGCACGATTAAGGCCATTTTGACGAGACCCATCCAATTATCCAGAGACGCGTGAAGGACGCTCACCTGGACACTTGACATCCATGAAATAAGAATTGGGACTCTGTACGAGACGCTTCTTCTTGtgcctcctcctctcctcctcggGGGTCGGGTGCAGCAAGTCTTTTGCGAGCTATTTACATAAACAACATGATTCTACATGAGAAAACTGccattaaacacttttttgatCAGCACCTTCACACAAACATCCATCTTATTAGGAGAGCTGCCTATCCAGACAGCATTACTGTAGCATGTCTTAAATATTGTCTAGGTAGGTagataataatgttttgatggAGCCACGCAGAAAGCTTTGCCATTTTCAGTTAATTCTGGCATCGCCAGAAAGCCTCACGACATCCATTTTCAGTCTTAAAGCGATTGCTTGTCTCAAGCGGAGGCGTGAACACAGTTTAACCGCTTTAGAGTATAGTATCACAATATCAGATTATAAAAACGCACGGGCACTTAATCGTGCGTCACATTACTGTTAAACGTCCATGTTTTGTTCTATGCGCGCCGCCATCTTGATGCAGGGCGCGAATCCACGCCGCCGAACCATTCGAGACTCAACGCTTATTTTTACGTTCATCTTCTAGTTTACGTGACAAGGCGTACATTAAGGCCGACCGTAAGGGTACGTTCTTGAACGCGTTCCGATATCTAGGTCTCAATGTCATGTAAGTGGTGTATATGGACATGTTTTTGCTCTCTAGTACTCACTGGCATGTTGGCGAAGATTAAGCCGCTGCCAGAAAGGAAGTTCCAGGCGGAAACAGACGAATATCATCCGACGAGCGAGGCGGGGAGCGGAAGTGAGGCATCGGACGTAGATCGCAGACATGTTAGTAGAGGCAGAGGAGGCCAATAACGGTGATAAAACATCGTTGTTATGATGGCTTTATGTGGAGGGCCTTCTCGAGTACGCTAACGTTCACAGAGTGAGCAGAACCCAGGAGGTGGAATCAAGACTGCTCACTTCCAGCTAATCGTGAGAGACAAGTGTCTGCAGATGTGCCCATCCAGAGACTTCAGGCATCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199224 True 2966 lncRNA 0.40 2 20209062 20212587
TU199227 False 1563 lncRNA 0.46 3 20209062 20212587

Neighbor

gene id symbol gene type direction distance location
LOC122323921 krt92,cki,cyt1l,cyt1,LOC107665142,LOC107727710,LOC107666325 coding downstream 34707 20172497 ~ 20174355 (-)
prf1.3 NA coding downstream 81386 20123545 ~ 20127676 (-)
stx1b stx1b,LOC107666328,LOC102220115 coding downstream 87426 20084182 ~ 20121636 (-)
gnb3b gnb3b,LOC107665150,LOC107727720,LOC107753988,LOC107666347,LOC108433753,LOC107563025 coding downstream 150221 20054269 ~ 20058841 (-)
tpi1a tpi1a,LOC107754015,LOC107666351,LOC107665177,LOC107727722,LOC107563024,LOC107549875,LOC103040446 coding downstream 156764 20046566 ~ 20052298 (-)
LOC122323285 LOC107756220,LOC107670108,LOC107600819,LOC107689591,LOC108411842,LOC106579793 coding upstream 305627 20518214 ~ 20529269 (-)
G134815 LOC107729882,LOC107693320,LOC107589419,LOC107753511,LOC107599494,LOC107670002 non-coding downstream 18919 20188789 ~ 20190143 (-)
G134816 NA non-coding downstream 20367 20187220 ~ 20188695 (-)
G134809 si:dkeyp-113d7.1,LOC107727714,LOC107665141,LOC107549870,LOC108438414,LOC107563030 non-coding downstream 54172 20154332 ~ 20154890 (-)
G134804 LOC107727707,LOC107665118,LOC107549831 non-coding downstream 67186 20141509 ~ 20141876 (-)
G134761 NA non-coding downstream 152202 20043920 ~ 20056860 (-)
G134840 NA non-coding upstream 2941 20215528 ~ 20215831 (-)
G134863 NA non-coding upstream 79013 20291600 ~ 20313375 (-)
G134883 NA non-coding upstream 149159 20361746 ~ 20361949 (-)
G134885 NA non-coding upstream 150980 20363567 ~ 20363936 (-)
G134888 NA non-coding upstream 153652 20366239 ~ 20366469 (-)
LOC122324012 NA other downstream 520676 19670787 ~ 19688386 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other downstream 556255 19542782 ~ 19652807 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other downstream 1275834 18876614 ~ 18933228 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other downstream 1517813 18687349 ~ 18691249 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other downstream 1967449 18225609 ~ 18241613 (-)
G134895 NA other upstream 169433 20382020 ~ 20382727 (-)
G134944 LOC107756202,LOC107600825,LOC107689598 other upstream 236966 20449553 ~ 20451196 (-)
G134948 zgc:162872,LOC107756215,LOC107692254,LOC107600823 other upstream 250362 20462949 ~ 20468681 (-)
G134949 LOC107670072,LOC107756217 other upstream 257633 20470220 ~ 20473163 (-)

Expression


Co-expression Network