G134948 (zgc:162872,LOC107756215,LOC107692254,LOC107600823)


Basic Information

Item Value
gene id G134948
gene name zgc:162872,LOC107756215,LOC107692254,LOC107600823
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 20462949 ~ 20468681 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU199392
GGAAAAGCAACCCGCGTCAACATGAACAAACCCCTCCGCCGCTGTCAACCCAGCTCGAGACAGACTCAAACACCGGGGAGAACCTGAACGGTACGGTTTAATGAGTCGCGCGCGTCAGCGCGGTCCACGTCCAGCGTCGTCGGCGGCGCGTGATGCAGCGCGGGTTCGCCGCGAGTCCGTCGTTTAGCGGCTCTGAGGTAATAACGGTCCACGGATGATGATCTGCGCCGGAGACCGCGATGCGCTCGGTGTGTCCGTGCTTCAGGCCTCCTGCGGGAATCAGTCGTGTCTGGATAACGTCTTATAGTGCGTCAAACTGTTGTTACAAACACTGAGTTCATAAGGAAGGAGCGAAACATGGACGCTTTCCTGGACTTTGAGGAGTGCATCAGGGACTCGCCTGCGTTCAGGCAGTCTCTGGATAAATGTGAGAGCGATGTTGCAGAACTGGAGAGCCGTGTGGAGAAAGTGATGAAGCTGTGCGGTCAGATGGTGGAGGCGGGTCAGAACTACACCTCCTGCAACCAGCTCTTCCTCTCAGGCCTGGCCGAGTTCACGGCGTATCATAAGAGCGACGGCGTTATTCTGAACTGCTTGCGTCAGTTCAACCAGGGTCTGCAGGAAATGATCCAGTTTCAGACGatgCTGTTTGATCAGACTCAGAGAGCCATTACCCAGCAGCTCACAAACCTGCTTTCACAGTTTGTGCCGCAGATTCGTGACACTCGGCGTGAGTTTGTCCGGATCGGAGACGATCTCGATGCTGCTGTTGTGAAAAACGCTCAGGTCAGTCGACACAAACCCGCTGACGCTGAGCGAGCGACTCACCTGCTGCTCGCCACACGCAAGTGTTACCAACACTTCGCCCTGGACTACTGCCTGCAGcTGAATAATTTCAAGGTGCAGCAGAAGTTGGATATTCTGAATTCGGTCTTCTCGTACTTTCACGCTCAGTACACGTTTTTCCACCAGGGATTCGACCTGCTGAAGGATCTAGAACCGACTATGAAGACGATGGCCTCGCAGCTCTCTCAGCTGTCGTCTGACTGCACCGCCAAGAAGAAAGACCTGGAGAACACACACCTGCTCGTCCAGCAGAGAGTGAGACATTATATTAGTCCCAGC

Function

symbol description
zgc:162872 Predicted to enable GTPase activator activity and metal ion binding activity.

NR:

description
PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199392 True 1125 TUCP 0.55 9 20462949 20468681

Neighbor

gene id symbol gene type direction distance location
LOC122323921 krt92,cki,cyt1l,cyt1,LOC107665142,LOC107727710,LOC107666325 coding downstream 288594 20172497 ~ 20174355 (-)
prf1.3 NA coding downstream 335273 20123545 ~ 20127676 (-)
stx1b stx1b,LOC107666328,LOC102220115 coding downstream 341313 20084182 ~ 20121636 (-)
gnb3b gnb3b,LOC107665150,LOC107727720,LOC107753988,LOC107666347,LOC108433753,LOC107563025 coding downstream 404108 20054269 ~ 20058841 (-)
tpi1a tpi1a,LOC107754015,LOC107666351,LOC107665177,LOC107727722,LOC107563024,LOC107549875,LOC103040446 coding downstream 410651 20046566 ~ 20052298 (-)
LOC122323285 LOC107756220,LOC107670108,LOC107600819,LOC107689591,LOC108411842,LOC106579793 coding upstream 49533 20518214 ~ 20529269 (-)
G134890 NA non-coding downstream 89673 20372987 ~ 20373276 (-)
G134888 NA non-coding downstream 96480 20366239 ~ 20366469 (-)
G134885 NA non-coding downstream 99013 20363567 ~ 20363936 (-)
G134883 NA non-coding downstream 101000 20361746 ~ 20361949 (-)
G134863 NA non-coding downstream 149574 20291600 ~ 20313375 (-)
G134950 NA non-coding upstream 4742 20473423 ~ 20474948 (-)
G134951 NA non-coding upstream 7424 20476105 ~ 20477429 (-)
G134952 NA non-coding upstream 9123 20477804 ~ 20478831 (-)
G134944 LOC107756202,LOC107600825,LOC107689598 other downstream 11753 20449553 ~ 20451196 (-)
G134895 NA other downstream 80222 20382020 ~ 20382727 (-)
LOC122324012 NA other downstream 774563 19670787 ~ 19688386 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other downstream 810142 19542782 ~ 19652807 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other downstream 1529721 18876614 ~ 18933228 (-)
G134949 LOC107670072,LOC107756217 other upstream 1539 20470220 ~ 20473163 (-)

Expression


Co-expression Network