maneal (si:ch211-30b16.2,LOC107569868,LOC107686956,LOC107708724,LOC107719841,LOC107693995)


Basic Information

Item Value
gene id maneal
gene name si:ch211-30b16.2,LOC107569868,LOC107686956,LOC107708724,LOC107719841,LOC107693995
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 2876924 ~ 2884651 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217009.1
GGCGACAAACCCGCGAGACTCCACCTCCCAGTAACAAGAGACGATTTATCGTCAGCACGCCGGCGACGGAGGGGCACGGGAATCGGCCGAAAGCCTTTCATCCCGCGGGAAAGAATTCGAACAGAGCTCCGCGGCGTTCGGTTTCGGAGACGGACACGGACGCGCCGGTGCACGTGACAAACGCGTGATTGCGTTTCCGTCGAATTCAAACGGGCGTGTGCGACTTAGCGAAAACAAATCTACGCGATGTTGAGGTATGAATACAGCAGGTCGCCGGTGTTCCGTGATAAATAACGCTTAGCGTCTTCGCTGCACGGCGAGAAATTAATCGATTCGTCCATCATTTGTACGGTTTGTTAACGCTATGAAGATAATGGCTTCCTGACGGGGACCGAGCGACCGATCCAGAGTGCCGAATGCAAGCTGGAAATGGGACACGGGCATTTGACGCCCCGCTTCTGGAGGCCTCGGTCGTACTAACCTCCGCGTGAACCGCCGCCtccagcaccacggacagcgaCCATGAACAGGTTGCGCAGGAAAGCGTGCGTGGCTCTTCTGTTGTTCACTTTGTTTATTTTCGGCACCATGATGGGCCTACGGACCCTCAAGCCCACCGATGGCTTCTCGGATCTCGCTCCGGGGATGGAGCTGATGCCTTTGGTCGGAGAGCGAGTGGAGCAGAGACCCAATCCCGTAGCCGAATCGGCGGGTCAGAATGGTGGCGTGGCCAGTGACACCAAGATCGTGTTCTCCAACTCTGGACCCGACCACAGCATATTCTACGACATtcacattttctattatttatggTACGGCTCGCCACAGATGGACAGTAGTTATATACACTGGGACCATGTACTGGTGCCGCACTGGGACCCCAAAATAGCTTCCAGTCACCCTAAAGGACGCCACAATCCTCCAGACGACATCGCGTCCAGTTATTACCCTGAACTGGGACCCTACAGCTCCAGAGATCCGGATGTCATTGAATCCCACATGGCGCAAATCGAAGCTGCCGCTGCAGGTGTGGTGGTCCTTTCCTGGTACCCTCCTGGTGTGGCAGATGAACATGGCAAACCCTCGGAGGATCTAGTGCCAGCTGTAATGGACGCTGCCCATAGACACAGTATCAAGGTTGCGTTTCACCTGCAGCCCTACAAAGGCCGGACGGACCTCAGTGTGCATGACAACATCAAATACATCATTGACAAATATGGCAAGCATGGGGCTTTCTACAAGTTCAAGTCCAGCACTGGGAAAATCCTTCCTCTCTTTTATGTGTACGACTCCTACCTTACCCCTCCGGAGGCCTGGGCTGAGCTGCTGACCGTCAGGGGCTCTCACAGTCTCCGAGGAACCCCTTACGACGGCGTCTTCATCGCCCTCATTGTGGAGGAGCGTCACAAGCAGGACATCCTGGCCGGCGGGTTTGACGGCATGTACACCTACTTTGCTTCTAACGGCTTCTCCTTTGGATCTTCTCACCAGAACTGGAAGGTGATCAAAGCTTTTTGCGACAAGAACAACTTGCTGTTCGTGCCTAGCGCCGGACCTGGTTATATGGACACCGCCGTCCGGCCGTGGAACAATCACAACACGCGCAACCGGGTGAACGGACGATATTACGAGACCTCTTTGCAGGCAGCGATGTCCATAAGGCCTGATATCATCACAGTAACGTCGTTTAATGAGTGGCATGAAGGAACTCAGATTGAGAGGGCTGTGCCCAAGAAGACTGTGGCCCGTCTGTATTTGGACTACAAACCCCATCAGCCAGACCACTATCTAGAGCTCACCAGGAAGTGGGCAGAACATTTCAGCAAGGAGAAAGAGCAGTGGCTTATGTGATTGGACCTGTAACGTCTTAAAGTATTTTCACATGTTATTAACGTTATCAGCGTTACCGATTTAATGTTTCAATTTATGCATACACTTTAAAGGCAGCTAATTAGCAAGACAAGCCACCTTCTTTTTCGGTCTATCGATTGATTTACTTGCGGTTTCAATGCAAGTATTTACAAGAAATATCATCATTTTTGTGATTCGATTTGAAAACCCGTTTGCATCGGTCCACTCTCATTCAGTCAAGTGCGTATTTATACGTGGGACAGCCCGAGACATGTGAGAACCAAAGCCGTTTGGCATCAAACCAGGCTGGAAATGTCTTGATGTGCCATATTTGAGTGAATAGGCTAGGCTAATGCACAATTTTTATGGTATGCTTTaatggtttttggtttttttccccGTTTATTTTTTTGGACTCACTAGCATTTATCCTCATTCCCTGTCATCGCACGGAAAAGAGAAGTGTGAACATTGCGCTACATGCCTCCTTCGGGGTGAATTTGCAATTtttaactgttcctttaacattaGGCATTGAATCTGACTTCTGCTAGCAGCAACTGTGTGGCCTCGGTATTCAAAGACtacttttattgtgtgtttggatgacatttaaaaaatggctgGTGGTTGTGGATGTGGTTTGTTTGAATAATGACTGATTTATTATGTTAAGTAAATCCTAATTATGCATATTGTAACTcctgtttaatattaaacagtaaAAGGAAATCAA

Function

NR:

description
PREDICTED: glycoprotein endo-alpha-1,2-mannosidase-like protein

GO:

id name namespace
GO:0000139 Golgi membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217009.1 True 2587 mRNA 0.49 4 2876924 2884651

Neighbor

gene id symbol gene type direction distance location
stmn1a LOC103471979,LOC105933928,LOC102781761,LOC107098265,LOC104924882,LOC103142368,LOC100709328 coding downstream 140794 2733736 ~ 2736130 (-)
cited4a LOC107689549,LOC107556893,LOC107595899,LOC107732920,LOC107675931 coding downstream 618490 2253838 ~ 2258434 (-)
LOC122324005 NA coding downstream 815199 2060114 ~ 2061725 (-)
ube2e1 ube2e1,LOC107655879,LOC107565235,LOC107743927,LOC105903698,LOC107700659 coding downstream 871890 1991179 ~ 2005034 (-)
rpl15 rpl15 coding downstream 889735 1983801 ~ 1987189 (-)
oprd1a oprd1a,LOC107688080,LOC107595906,LOC107732912,LOC107689567,LOC108411271 coding upstream 119341 3003992 ~ 3022358 (-)
arid1ab LOC107712599,LOC107700714,LOC107550655,LOC107737764 coding upstream 499086 3383737 ~ 3437997 (-)
nudc nudc,LOC107689540,LOC107700719,LOC107567584,LOC107550646,LOC107729000 coding upstream 612048 3496699 ~ 3501432 (-)
zgc:175136 LOC107700788 coding upstream 630806 3515457 ~ 3518515 (-)
tpbga tpbgl,LOC107700735,LOC107712598,LOC107550650,LOC107567595,LOC107689565 coding upstream 646593 3531244 ~ 3536293 (-)
G130006 si:ch211-30b16.2,LOC107708724,LOC107719841,LOC107693995,LOC107686956,LOC107569868 non-coding downstream 997 2875628 ~ 2875927 (-)
G130001 NA non-coding downstream 16847 2859860 ~ 2860077 (-)
G129998 NA non-coding downstream 73320 2787203 ~ 2803604 (-)
G129987 NA non-coding downstream 123184 2753416 ~ 2753740 (-)
G129943 NA non-coding downstream 525435 2351278 ~ 2351489 (-)
G130040 LOC101156750,LOC106570256,LOC106588643 non-coding upstream 6988 2891639 ~ 2892473 (-)
LOC122324069 NA non-coding upstream 31811 2916462 ~ 2935657 (-)
G130049 NA non-coding upstream 39358 2924009 ~ 2924386 (-)
G130052 NA non-coding upstream 43463 2928114 ~ 2928549 (-)
G130060 NA non-coding upstream 88366 2973017 ~ 2974237 (-)
G130000 NA other downstream 43968 2825344 ~ 2832956 (-)
LOC122323398 pkib,LOC107098269 other downstream 125354 2740004 ~ 2751570 (-)
G129738 NA other downstream 1377518 1498688 ~ 1499406 (-)
pef1 pef1,LOC107664714,LOC107726139,LOC107698987,LOC107712637 other downstream 1589718 1281539 ~ 1287206 (-)
smim12 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other downstream 1596415 1278912 ~ 1280509 (-)
G130041 LOC107687396,LOC107708727,LOC107595896 other upstream 23838 2908489 ~ 2911603 (-)
G130083 LOC103461248,LOC102786159 other upstream 264503 3149154 ~ 3149789 (-)
LOC122323345 fam46bb,LOC107712594,LOC107700817,LOC107737782,LOC108413340,LOC103370123 other upstream 428738 3313389 ~ 3323828 (-)
zdhhc18b zdhhc18b,LOC107700701,LOC107737765,LOC107689541,LOC108413341,LOC107550656,LOC107570996 other upstream 478830 3363481 ~ 3379927 (-)
kdf1b LOC107700730,LOC107712602,LOC107550653,LOC107754920,LOC107567594,LOC107689538 other upstream 624183 3508834 ~ 3514679 (-)

Expression


Co-expression Network