LOC122323294 (LOC107654670,LOC107589446,LOC107696517,LOC107706136,LOC107591657)


Basic Information

Item Value
gene id LOC122323294
gene name LOC107654670,LOC107589446,LOC107696517,LOC107706136,LOC107591657
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 13503313 ~ 13506412 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217022.1
GAAAGATCATCTGATGTGGCAGGGAGGAGCTTACAGTCAATATACACTTGTGCTGTATTTCTGCGTCAATAGTGCTTTCTCTAGACCAGGAAGTGGGCTGGACTGAGCTTCACGGCAGAGGATCTGAAGAGCACTGTATATCTGACCTTCGGTTTTTCACAGCACTATTATGGAAAGTCAGAGGAGATCATTTGGAGATGATACTTCCATTTCGCCTGAGTTGGACCGCTTGATCAGACAGAGAGGTCGAGATCTACGGCTGCGTAAGCTTGACCAGCAGAATGCTGTGAAGATAGTCAACCATCTGATCGACAGCCTGCTGGAATTTCTGAAGAATAATGATGATCAGCCCTTCTTCAGGGACATCTCAGTTCTCACCAGTGGAAGCTATTACGAGATGGTGaagATCAACAAACCCAATGAATTTGACATTATGCTGAAACTGAAAGTCCCAAGGCTTGTACTATCAGAACTGGATGAATATCAAGGACTGTTTTATAAGATAATGCTGTCCAAAGCCACACGAACCGAAATCCAGCACTTTCTTCTAGAAGATGACCGGACCATCTCAGCAACCAAAATCAAAGCAGAAATGTACCGCTTGGTCCGCAAATTCATAAGCAACCATTTTAAAGGTGAAGGTTGGGTGATACGCAGAAGTCTGGTTAATTCACCAGCGGTGACCCTTGAATTTAAGGCAAAAGAGAAAGACGATTATGTGATGTCTGTGGACATCGTACCTGCTCTTGAGGTGCCACAAGGTTGGCCACAAGCAGCACGGGCAGGCCCTAATATAAAAAATtggcttggaaaaaaaaattgtcgcCAGTTAGTGAGTAAGCCTGTGTATTTTGTCCCAAAGAGACCCAAAGGAAGAAACCTCAAAGATGATGCCAAAGAGAGCTGGCGGATATCCTTCTCTCACATTGAAAAAGAGATGATCCAGTATCACGGCAATAAGAAGACGTGTTGTGAAAGTTATTCCAATAAGTGTTGTCGgaaactttgtTTGCGGCTTCTGAAGTGTCTGATTGAGGGACTGAAGCAGCAGTATCCCAAGGAGCTTGAGTCTCTGTGTTCCTATCATGGAAAAACAGCCTTCTTCCACGTCCTTTCAGACAGAGTGCAAGATTCCCTTTGGTCTCCAGGCCAGCTGTCCGTCTCCTTCATGAAGGTCTTTCGATACTTTGAGCGATGCGCAATGAATGGTTCACTACCTCACTTCTTCGTCCGTGAACATAATCTTTTCTCCCCACCTGCATTTCCCAAGCGAGCTATTGTATTTCTGGCCAATGTTCTGACGGAGCAAAGAGAATTGGGGCTTCCTGCCTTGAAGGCGCCAAGTCCTACATCTGCTCTCGTTCCTGCTGTGATTCACCCAATCAGTGGCACGGACAGTATTGTTGCCTCTGAACGTTTTTTTAAGCACATATATGTATGCTTATTAGTTATTATCGTGTGTGTAGGAATcggatgtttatttaaaaaatgaataacgatttatttatttattttttgaaaccTCTCCGGATGTGGAGAGGTGTTTAATGTGCATAAATGAACTATATGTAAAGTCtggttttataaatgcattttattttgtgtcagaATATAGTGCCATATTTCATTTGGCAGGAATGAAAACAAGGGATAAGTAGAATGACTCTTCATACTGATTGTTCAGCTCAATAAAGCTCAACAAACAAGATATCATATC

Function

NR:

description
PREDICTED: cyclic GMP-AMP synthase-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217022.1 True 1717 mRNA 0.43 7 13503313 13506412

Neighbor

gene id symbol gene type direction distance location
LOC122323414 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC107591637,LOC107696561,LOC107742829,LOC108426655 coding upstream 1115 13498275 ~ 13502198 (+)
LOC122323413 eef1a1l1,LOC107742828,LOC107706208,LOC107654700,LOC107589443,LOC100526699,LOC103044018 coding upstream 5249 13494814 ~ 13498064 (+)
si:ch1073-513e17.1 si:ch1073-513e17.1,LOC107697040,LOC107706204,LOC107742862,LOC107589448 coding upstream 12734 13482727 ~ 13490579 (+)
cap1 cap1,LOC107706206,LOC107697048,LOC107742832,LOC107696560 coding upstream 23994 13470196 ~ 13479319 (+)
kiaa0319l kiaa0319l,LOC107697050,LOC107706203,LOC107696545,LOC107742830 coding upstream 34183 13457329 ~ 13469130 (+)
rpl11 rpl11 coding downstream 629 13507041 ~ 13509479 (+)
eloa tceb3,zgc:55573,LOC107589441,LOC107742827,LOC107706212,LOC107654666 coding downstream 10713 13517125 ~ 13524932 (+)
pithd1 pithd1,LOC107654704,LOC107696572 coding downstream 18935 13525347 ~ 13527918 (+)
lypla2 lypla2,LOC107654706,LOC107706215,LOC107696570,LOC107742825 coding downstream 22180 13528592 ~ 13534978 (+)
ankib1a LOC107706216,LOC107654707,LOC107742824,LOC107696581,LOC107589494 coding downstream 29725 13536137 ~ 13554834 (+)
G132549 NA non-coding upstream 376696 13125877 ~ 13126617 (+)
G132547 LOC107591615,LOC107696587,LOC107731336,LOC107696584,LOC107552275 non-coding upstream 379347 13118716 ~ 13123966 (+)
G132541 psmb4,LOC107593590,LOC107669568,LOC107706179 non-coding upstream 400388 13101949 ~ 13102925 (+)
G132498 LOC107593576,LOC107731729,LOC107706171,LOC107696598 non-coding upstream 637718 12786644 ~ 12865595 (+)
G132755 klhl43,LOC107706211,LOC107589442,LOC107742826,LOC107696549,LOC107591641 non-coding downstream 5196 13511608 ~ 13512971 (+)
G132754 klhl43,LOC107589442,LOC107706211,LOC107742826,LOC107591641,LOC107696549,LOC108426671 non-coding downstream 6610 13513022 ~ 13513896 (+)
G132773 NA non-coding downstream 48599 13555011 ~ 13556679 (+)
G132774 NA non-coding downstream 54755 13561167 ~ 13561445 (+)
G132884 NA non-coding downstream 340370 13846782 ~ 13848115 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other upstream 166564 13309427 ~ 13336749 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other upstream 477287 13021417 ~ 13026026 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other upstream 1078235 12423290 ~ 12425078 (+)
LOC122323774 NA other upstream 1390416 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 1979432 11522229 ~ 11523881 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 1281132 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 1328189 14834601 ~ 14837969 (+)
LOC122323518 LOC107654743,LOC107688368,LOC107602377,LOC108413484,LOC107706254,LOC107710329 other downstream 1572042 15078454 ~ 15192566 (+)
LOC122323314 LOC107602378,LOC107591987,LOC107706255,LOC107710332,LOC107688367,LOC107654747 other downstream 1802315 15308727 ~ 15313877 (+)
anxa14 LOC107706258,LOC107654687,LOC107710308,LOC107592054,LOC107688418 other downstream 1849196 15355608 ~ 15361845 (+)

Expression


Co-expression Network