c19h1orf109 (LOC107688373,LOC107754259,LOC107592951,LOC107654741,LOC107591985)


Basic Information

Item Value
gene id c19h1orf109
gene name LOC107688373,LOC107754259,LOC107592951,LOC107654741,LOC107591985
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 14956900 ~ 14958500 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217165.1
TGGATGATACGTTTTCCCGGAAGAAGCGCATTGCCGTTATCACATGTACATTTACGATGGAAACAGGACGATTTTATCCCCTCTCACAGACGTGATTTGTAGTTTATCagataaatttaaaatgtatattaaaaatttatgttttagctttatataaatatatattcgtTAGTTATAGTCTTCGTTAAATGAACGTCGGTGTTTCTCCAGTTCTGTCACTgaaaaggatttttaaaaaatgtccagTGCTGTTTTATCATCATTGCACGAACAACtcaaaaaatgctttgagaCGTTAAAAGCGAATAGAAGCGTTTGGGACGGTGAACTAGCTGAATGTAAACCTCTAATGAGCTCTCTTGGAAACCTTGCAGTGCAGTTGAAGGCACTGAAAAACGTTCAAATTGCAAACACACCTCTTGCCAATTTCCCTAGTTTACAAGAACGCCTTCGTTACAAACTGTTACTGGCTGTGGATGCAATTCTGGGAAAGCTTGCTGACAAAATGGATGCTCTTCAGAAGGTGCAGGGTGCCATCAGTCAACAGGTGTCCGCTGTTTTCCAGTTCTATGAGAAGAACACAGACACTCTTGACATTGCTGTTTGTGTCTCCAGATCAGCCATCTGTCCCTCCATCTCAGATATGTTAGAGTGGCTTCAAGATGCAGAGCGCTATTACCGCCTACAATTAGTGCAGAGAAGGTACCTCCTGCAGACACTGACGCCCAGCGACCTTACGTTAATGGAAACGGCACCAAAGAGATGGGAATCTCTACATTCAGCTAGTGGAGAGGAGAGAATTGCAGatgCAATGTGTCAAGTATCATTCTTCATGGAGACTGAATGAATATCAGCTGTGTTATTATCAAGAAGCCATTTCCATTTCCTGTGTTGGCTGTTGTTCTCAGTTTGACATGGAaagatcttttaaaaaaaggacagtGGTATGGTAATGGTGGAACTCAAGACTCCTGGATTAATTTTGTGCTGCACTGGTCATTAGCTTTACAAGGACTACGCATTAGCATCATTGTAAGAGCAGTgctctattttaataaatgtggttatttaa

Function

NR:

description
uncharacterized protein C1orf109 homolog

GO:

id name namespace
GO:0007275 multicellular organism development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217165.1 True 1072 mRNA 0.40 4 14956900 14958500

Neighbor

gene id symbol gene type direction distance location
LOC122323565 clspn,LOC107706248,LOC107654737,LOC107754255 coding downstream 21831 14925718 ~ 14935069 (-)
LOC122323256 LOC107706246,LOC107654736,LOC107754261,LOC107688374,LOC107591981 coding downstream 32790 14921661 ~ 14924110 (-)
psmb2 psmb2,LOC107592948,LOC107688376,LOC107591978 coding downstream 41501 14907627 ~ 14915399 (-)
sdc2 LOC107654728,LOC107591973,LOC107706240,LOC107592944,LOC107688380,LOC107754266 coding downstream 126385 14806739 ~ 14830515 (-)
angpt1 angpt1,LOC107654726,LOC107706239,LOC107696520,LOC107754267 coding downstream 253352 14655276 ~ 14703548 (-)
LOC122323517 ppce,LOC107654745,LOC107710331,LOC107602379,LOC108259106 coding upstream 321929 15280429 ~ 15292601 (-)
LOC122324119 NA coding upstream 402426 15360926 ~ 15362818 (-)
rpl14 rpl14,LOC107710319,LOC107688416,LOC107654689,LOC107706260 coding upstream 418137 15376637 ~ 15378662 (-)
trnap-agg_22 NA coding upstream 426695 15385195 ~ 15385266 (-)
trak1b LOC107591988,LOC107710336,LOC107654751,LOC107688362,LOC107706145 coding upstream 467701 15426201 ~ 15439451 (-)
G133143 NA non-coding downstream 118947 14836460 ~ 14837953 (-)
G133144 NA non-coding downstream 121039 14835452 ~ 14835861 (-)
G133016 rbm24a,LOC107696536,LOC107592929,LOC107706227,LOC107754275,LOC107654717,LOC107591968 non-coding downstream 528078 14403518 ~ 14428822 (-)
LOC122324095 NA non-coding downstream 684182 14268267 ~ 14272718 (-)
G132852 NA non-coding downstream 1395441 13561128 ~ 13561459 (-)
G133190 LOC107654743,LOC107706254 non-coding upstream 232305 15190805 ~ 15277403 (-)
G133226 NA non-coding upstream 425347 15383847 ~ 15384115 (-)
G133313 NA non-coding upstream 455475 15413975 ~ 15424498 (-)
G133315 NA non-coding upstream 521832 15480332 ~ 15481202 (-)
G133361 NA non-coding upstream 666825 15625325 ~ 15626280 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other downstream 64982 14887528 ~ 14891918 (-)
G133132 NA other downstream 172477 14784188 ~ 14784423 (-)
G132785 NA other downstream 1448447 13507664 ~ 13508453 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other downstream 1454530 13494830 ~ 13502370 (-)
G132733 NA other downstream 1671439 13284531 ~ 13285461 (-)
G133217 NA other upstream 407934 15366434 ~ 15369736 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other upstream 686362 15644862 ~ 15648579 (-)
G133373 LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391 other upstream 701419 15659919 ~ 15660720 (-)
evx1 evx1,LOC107688412,LOC107602371,LOC107710323,LOC107654696,LOC107748750,LOC107592093 other upstream 778447 15736947 ~ 15740329 (-)
npy LOC107592012,LOC107748754,LOC107656665,LOC107688404 other upstream 963723 15922223 ~ 15924285 (-)

Expression


Co-expression Network