LOC122323394


Basic Information

Item Value
gene id LOC122323394
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 18209725 ~ 18216545 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217204.1
tgtCCATGTTTAATCTGCATTAGTAATTTATCACTTAGTTGCATATAAAAGGTctgcagaaataaaacacacactaacTTAAAAGGGTCATACtgtatccatccatctgtttTCCAAACAGTTTGTCATTATGTAGAAGTTATATCAGTCAAAAAACCCACCCAGCTTAGTCCATCACAGAGCTAACAATAACTACAATAAGAATACACCTTCACAGTTTAGCGCATCTGATTCAGCTGTTCTGCATGGTCTTGTATTTGTTCTCTGTGGGATGTTCTCATGTGTCATGTTGTCACTGATTCTCTGGTTCTGTGTGTCTTGTTCTCATTAGATGGTTTTGTGGTCCCCTGTGTCAAGCATAAAAGATATCCATGCCTACTCCTTTATGCTGATAATTGTATAGCTGTTCCCTTGTTTCTAGTTCCTGTGTTTTCCAAGATTAACCCGTGGATAAAACCTTTGACTGTTTCCGTCTTTTGATTGTTTGCCGCCATTCATGCTATTTTTGCCACATTGCgttgtttacagttttgttacAAACACATGTGTCTGTTCTTTGTTGTACACAGATATGATCATTGAAAAAACAAGGCATATTCTGAAAAGTGTCACTAAAAGTTCATATCAAATCGATAAAGATAGACGGAAGAAGGCAATCATAGGGATTTTTGGAAAATCAGGAGAAGGGAAGAGCTCTCTTTTAAGTGCAATCTTGGGGAAAAAGGATCTCTTACCGTCTGGTTGTTTTGGTGCCTGTACAGCTGTTGTTACTCAGGTGGAAGCCAATATAGAtgactccaactacacagcagaGATTGAATTCATCTCTAAAACGGAGTGGGAAGAAGAGCTCAGTGAACTTTTCAGGGATATAAACAACGATAGTGGTGACAGGAATGAGGAGTTGATTAAAAGTGCTGTAGAAAAGATAACTGCACTGTATGGAGCTGATGCAGACCAGAAAACATTAGAAGAGCTCAAGAATGATGAAAAGTTTGCTGAGATTGAAACCTTTTTGTCTCTCCATAAAGAAGAGTATCTATTCATTTCAAACAGTAATCTCTCTGATTTTACCAGCGAGGTTGCAAATTACATCCAACACAGTGCGTCAAGTCCTGGCGGCTGGTTCTGGCCGCTGGTGAAGAGCGTGACCATCAAGATACCAGACTGTCGTGAACTCCTGGAGCACATTGTGCTTCTTGATCTTCCTGGCACTGGAGACTgcaacaagataagaaatgaccTGTGgaaatctAAACTGAGAGAGTGCTCTTCAGTGTGGATTGTAAGTGCTATCAATCGTGCGATCACTGACAGAGACCCCTTGGGGTTACTGAAGCACTGCATTGAAGAACTGGGACCAGGAGGAAAATGCAAAAGCATTAACTTCATCTGCACAAAGACTGATGAAATAAGTCCAGCATCATATATGagatctgcACGACTTTCTAGAGACCAAATCCCAGATGACAAGGATCAGGGAAAAACATGCATACTTCATAGAAATGAACTTGCCAAGACAAAGGTCAAAGAAAAGTTTGACCATTCTGAAATTAAGaacattttaaataccaACAATCAGTTTCAAGTTTTTACTGTGAGTTCCAATGCATTCTTTGATCACAATTTAAATCTGGAATCAAGTGAAACAGAAATCCCAAAGCTGCAGGATGATCTGAAGAATCTTAACAAGAGCACTAACAGAGAACTGGCCAGAGATTATGTCAATAAAGCAAAGGGAATTTTGTCCTTGATCCAAAGTGGCCAGCTGGATAAAGACAAGAAAACGattGAAATGAAATTCAGCATCATCAGAGAATTTGAGAAGAACTTAAAGGAGTCACTAACAGCACTTGAAACGTTTTTTGACAGCATTCATAATGATCTGGAGCAGCATCTCTCTGAGGGAGTGGAAGAATCTGTAAAATCATGTGTTGATTCCACAACGAAATTAATAGCACCTAATAAGGATGGAAGGGGGTTTCATAAAATCCTTGGAGCATTTTGCAGGAACTATGGATTCTACTGGTTAAAATCTCAGAATGTTGTTCTAGACCTGAACAAGACATTGGCACAACATTTgcacaaacatatttataatgatttcaGTCAAACTTTTCCTGTTGATGGAAAAACAGGAAAGTCAGTGCAGGAACAGATTGATAAGTTCAGCATCATCCAGAGTGACTCTGTTTACACCAGTTCTGACATTCCATTCCAACACATGCTCAACTACATCAAAACTGAGgaaACCAAACTGAAGGCAGCCCTCAAAAGAGACATTGTTGACATGAAGAAGGACATCTTCTCATCAGTTCAAATAACCATTGTGAAAGAAATGGCTTCTTGTTATCAGCaaGCTGCAGCTGTGAGAGGAACAGGATCCATGAAGATGAAGCAAGACATTTTAATAACCAGAGTCGATGATATAAAACAAGACATGTTCAACAAAGCAAAAAAggaaatgcttaaaaagttcACTAACTTAAAGCTGTATGTATTGAATACTATTAAAACTGAACTACAGGAAGTAATAGAACGCTCACAATCACAAACCAGCGAAATGACACGGATGGATGTCTCTAGAGAGATTGAAGAACTGGAAAGACTTCTGGAGCAACTGTCTGACTGATGCTCATCAAGCAAGAACTCACATAAGAAACATAACAATGTGGCAACAAGTAACAGTCAAGTTTTACAACAAATAGTTTTCACTCAAATGTTAGATGTTTATTTAAGTTTGTTTGGTGGAAGATGTATTTCATATTCAGTTGATCATTTTCATACAAtttctaaaccttttttttattttatatgcatgatACACAAACTTCGTCAGTGAAATGTTTGTAGCTGTCTGACTGTAAAGATTTACTGTATAGATTAAGTGCAAAGGTCTTTCTGAAACAGATGCAGTAGTGACCGTTAAGAAAGGATGTCAAGATATTTCTAATgtcttgatttatttactgtgcTAGATAAGCTTTACGCATGAAGTCAGAATGAAAATATCTGAGATGTGTCACAAGAAAAAGAGGACTGGGCTTGTTTTTCAAGCATGAATGGACTGCGTGAAGTGTATAAAGTTTGCTAATTGCTGCGGGTGTGAGGGACAGATTGAAACATTGAAACTTACTTTATCAGGTAATAATATGTTTGCCATGGGAtgcaaaatacgtttttttaggCCTATGACAGgcattaaactaaaaaatacactaaaaccACATAACAAAATTTTGGTAAGTctttttttaagtcaaaattaaaatgtggtaagtcttatttactgtaatgtaaCAGGTTATAGCTAGCAAGCAGCTTACTGTTTCCTTTTAGTGGCTGAcgttattttgttttctgtgtcttTCTGAATACAGACACCAATCTCCTGCACAGCCTGGAAcgtaacatttatttcatgatttGCCATTTTTTGCTGTTATCCTTACTTGATTCTGTACAGTCTCTGCAGgacttctgattggctgtgcaGGTCTTGCTGGCCTAAAAAGGCaggtatataaaaattaaaggtGCCATAAAAATCTTTCTATGACACCTTTAAATACCTTTAATGCGAAGATATGATGCagcaaggtttttttgtttttttttaaaatataaacatgatgggttttttttttttttgagctatTAAAATCATAATGTATAGAATTATATTTGGCATCCCAGGAGTTCTTAGGACACATAAATGTGCACTCAAAAATGTGTTCAAATGCGCacattatgtataatataatatatttaaaacagacaatattttttggtttcatgAGCATTACGTACTGCTCTGTTTATGTACTTGCGGTGAGGAGGAGTTGAATGTCAACATTAGTCTTCCTGGTAGAACCTTTGCTAAAGCTTTCATTTCTGTATCTTAAATAgtctgagggtgagtacattttctgcatatttttgggtgaactattcctttaagtgtattatttttataaaaggaTAACCTAGAGATGCACATAGAAAAAACAAACGATCATTTCCTATCTTAGTCTTGAAAATTTTGCCTGCAGACAAAGAACACAGTGTCCCTTTGCTTTATTTCATGGCACTTTggtgtttatgtaataaataaacaaacgtatgctaaaata

Function

GO:

id name namespace
GO:0010942 positive regulation of cell death biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0043068 positive regulation of programmed cell death biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217204.1 True 4133 mRNA 0.37 15 18209725 18216545

Neighbor

gene id symbol gene type direction distance location
efna3a efna3,efna3a,LOC107750808,LOC107739487,LOC107693331,LOC108272373,LOC108437928 coding downstream 108134 18031309 ~ 18101591 (-)
efna1a efna1a,LOC107678802,LOC107693333,LOC107739488,LOC107750807,LOC107589415,LOC103043830,LOC108437910 coding downstream 227270 17969484 ~ 17982455 (-)
snx27a snx27a,LOC107750804,LOC107599501,LOC107678803,LOC103472691 coding downstream 280529 17916500 ~ 17929196 (-)
crabp2b crabp2b,LOC107724072,LOC107589501,LOC107656471,LOC107599588,LOC107739613 coding downstream 414765 17792359 ~ 17794960 (-)
scamp3 scamp3,LOC107724082,LOC107693344,LOC107656474,LOC107599508,LOC107739575 coding downstream 421626 17780819 ~ 17788099 (-)
hax1 LOC107729882,LOC107693320,LOC107589419,LOC107599494,LOC107670002,LOC107753511 coding upstream 24983 18241528 ~ 18244835 (-)
ubap2l ubap2l,LOC107589420,LOC107669979,LOC107599491 coding upstream 28944 18245489 ~ 18267248 (-)
tuft1b LOC107693318,LOC107729883,LOC107589508,LOC107732690 coding upstream 52626 18269171 ~ 18281116 (-)
cgnb LOC107729898,LOC107693317,LOC107589422,LOC107670001,LOC107716597 coding upstream 87193 18303738 ~ 18321719 (-)
pygo2 LOC107716595,LOC107589423,LOC107729895,LOC107670005,LOC107693316 coding upstream 106266 18322811 ~ 18328270 (-)
G134319 NA non-coding downstream 191463 18017969 ~ 18018262 (-)
G134317 NA non-coding downstream 243186 17965575 ~ 17966539 (-)
G134309 trim46b,LOC107678799,LOC107599500,LOC108241966 non-coding downstream 261891 17938947 ~ 17947834 (-)
G134298 NA non-coding downstream 337769 17869131 ~ 17871956 (-)
G134299 celf3a,LOC107693341,LOC107739496,LOC107589410,LOC107750801 non-coding downstream 352539 17852172 ~ 17857186 (-)
G134334 NA non-coding upstream 51760 18268305 ~ 18269060 (-)
G134332 NA non-coding upstream 73512 18290057 ~ 18303657 (-)
G134365 LOC107726654 non-coding upstream 200481 18417026 ~ 18417853 (-)
G134411 oxr1b non-coding upstream 240620 18457165 ~ 18460899 (-)
LOC122324145 NA non-coding upstream 306655 18523200 ~ 18532017 (-)
si:dkey-266f7.5 NA other downstream 21696 18169523 ~ 18188029 (-)
G134318 NA other downstream 198326 18010882 ~ 18011399 (-)
s100a10a s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278 other downstream 274289 17929689 ~ 17935436 (-)
LOC122324164 LOC107589398,LOC107693356,LOC107724088,LOC107589397,LOC107599520,LOC107665487,LOC107724089 other downstream 593448 17613446 ~ 17616277 (-)
G133948 LOC107693373,LOC107724108,LOC107739520,LOC107599537 other downstream 875491 17330697 ~ 17334234 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other upstream 9064 18225609 ~ 18241613 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other upstream 470804 18687349 ~ 18691249 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other upstream 660069 18876614 ~ 18933228 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other upstream 1326237 19542782 ~ 19652807 (-)
LOC122324012 NA other upstream 1454242 19670787 ~ 19688386 (-)

Expression


Co-expression Network