si:ch211-152p11.4 (LOC107754837,LOC107694339,LOC107584295,LOC107677469,LOC107711337,LOC107595601)


Basic Information

Item Value
gene id si:ch211-152p11.4
gene name LOC107754837,LOC107694339,LOC107584295,LOC107677469,LOC107711337,LOC107595601
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6716739 ~ 6725694 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217257.1
CTGGcattctctgtgtctgtctttctttcctttaaaaTCCGGCACAATGCTGCGTAAGTTCAGTTCAGAGGGCGCCTTGTTGGAGCTGGATTTCCTGCCCTGGGATAGAGATGGGACCCCGGACACCTTGGACGATCAGCCAGATGGAGCCTCAGCCTCCTATCCTTGCACCCCAGATGCAAAGTCAGGGAGTGCTGGAAAGGGGGAGCTTAAGAGAGATCACAGCATTAGTGTGGAAAATCTGGTGGACTTGGAGAAGGACCCCGGGTTACTGAAAGTGACGAATCTTAATGAGAGTTTTAAAGCGTACAGCGACAGCCAGCTCACTGCCAACGTCAAAGGCAGCTGTGAGAGTGTGGGAAAGTGTGAAGGCCAGCCCTACTCGACGTCATCCTCGCTGAAATCCGGCCATATGCCCGTCTCCCCGAAACCTCCCCACCATCACCGGCAGCAGGCTCGGGCCAAACTGACAGCTGCTAAATTACACCTTAAAAGCTTGTTTGGACAGGGTTCGCCGCAGTCTTCTCATTCAAATCTGGCCAATGCAGAGCACAGAGAGAACGTCACCAGCGCTAAAGAGAGGCGTTCTCGAATGCCTTTCCTCCGCCAGTGGAGTCAGGTGGGCCACGGCAAAGCTCGGCTCAGCAGGGCGGAGATGGAAAGTTGGGCCAAGTCCCTCGACGCGTTGCTGGAAAGCAGAGTGGGCGTCACGGTCTTCGAGGCCTTCCTGCGATCCGAGTTCAGTGAAGAAAACCTGCAGTTCTACACGGCCTGTGAGCAGTACGGACAGTCGTCCAATAAATTCAGCCTGCAGAGACGGGCCAAAATGATTGCTGAGACTTACATCCAGCCTGGTGCTCCCAGAGAGGTGAACCTGGACAGTAAGACGAGAGAACTGACCCTGGAGCTCCTCAAAGCCCCCTCGCACACGTGCCTCTCTCACGCCCAGAGGCGCATCTACTGCCtcctggaaatggactgttacCCCCGTTTCCTCCAGTCGGAGATCTACCTCGCATTACTGAGGGATTCATATGAAAACTAAGAGCGGGCGAAATGTCCGAAAGCGGGTTCATCCTAAAAACTGAACGGACATCATGCGTGGACAGTGGAGACTGCAAACGTCTAAAATCATCGGAACTActgaagagaaacagaaaggGGATCGTCTTGAACGCCATCGTCTTGAGGCAATGAGGAATGAAGTGCTTCGAACATTTTACAAGCAGGAGTTTTACTTGCTAGATATCACTGGACTAAATGGCATGTTGACCGGCAACAAAAGGAAGAAACACGTCTGGCAAGAAAGGGCTGTTCAGTGAAAGTCTGGAGCGATCATCAGGGTCAGACCATCCTTTGACTCCACCTGCATGTGGTTACAAAGAAATGGCACTAACGACTCATTCCTCAAATTTATCAATAATTATAGAATATAGCTAAATGCATAAACGAAAACTCCAGCTCTCAGCAAGACAAAAATTCAAACGGCCCGCTATCCGAATAAGCAATATGAACACCATTACGTTAAATAAAAGTTGAAAGCGTCCTCGGAGGCCAGACGGAtggtttgtgtttaaaatgcgTATTAGCACACTGTGATTTTACGGTCACGGATTGCATACTAAAGCTGCTGTACAAGTCATTCGTTTCAATACTTTTGACTCGAGATAAAGATCTGGGCCCGGTTGCATGGAAGTCTTTAAGCAATTTGACTTAGGGCTATTCCcgaggggggaaaaaactcCCTGAGCTAAGAGATTTCTTTTTAAGATCGTTGCAACAAACGTCACCGATACCGAAGTGTTTAAACGAAGCATTTCACAGTAGTTTCTGGCAACATATGGTGACGGGCGCCGCAGTTGCCATAGTTAccacaataaatacaaacttaACTAAAACGCCAACAAATAAACGAGCGCTGGCTGTTTCTACGTCGCCTTGTATGCAGGCGTTACCGAAGAAAGCGCCCTTTCTTCTATCAGGaagataaaacattacacaaatCTAACTAATTAAAGgcatacattaatttatatcgttatttcatgtaataattgattaataatcgtttacatatttataataatcgATATTAATCTCAATTACAACTCCATTTTCctaacaaaatacataattgaAAACCTGCAAGTCAagttttttacagtttcatGTTACGGTAGTCATTGCCATactatgcatatattatattttatttgcgcAGGTCTTAAAAATGTCCCAAGTGTTTAATCTGTGCTTGAAAATCCTAAAAATACTGCGTTTAAGATTACTTGAAGCCGTTTTGATCCCTTACATTTATCAAGGTGAAATGGTTGCCAGGGACTTTGTAGCAACACTTAAGCGAAGACTTAAGCGATTAAGGGAAATACTTAAGTGACAGCCTTAACTTCCCTTAAGTAAACCCTGCCATCCATGTTTCTCTAAGGGTACCTTTAACCTTATAATTAAGGGTTTTCTTGTCTTAAGGGTCATGCAACCGGCCCTTGgcccttttaaaaatctaaatagtaCGAACTGATGTTATTATAAAGGTTTTTTAGGTAATTGTAGAAGTCGGTAAATGTCACACATACTTAAATGACActctaaatggtttaaaatgcagACATCAGTGCTAATACCATCCCATAAGCACACATACATTTCCTACTTCTTCAGTTAAAGAGCAAATGATCTGAAGAGCACTGTATTCTTATTATTGTGCACCTATGTCCACTTGATCATCTGAAAGGCAACATTTTTATCACGTATATTCCAGATGAACGCACACAGTGAAAACTTGAGAATGAAGGGCTGTGATGTGCTGTTTGTATTTTAGTGGCTCTAGATGATATCTGCTGTGACTGACACACTGAAGACGGTACATGTATTATTACTGTAGACATGCGCTAATGTTCTCCAAGGCTTAAATCTGTTCGAGTATACTATAAATGATTTCCTTAAGGGAATGATGTAATTATGTGATCAGTGTACAAGAATGAGCATCAGATGACCATTAAGAGTCTTTATGTTTGTTTGAGAGCAGAGATGAAATTGAATCGAAAGGAACAAAATGTTCaaccatttaatttatttccacaaaaaaaaaaaaaaaaacgtctgtaCTTGCATAGACccgtttgtaaaaaaacatgataaaagatCATATTATAGAATTGCGATTATAAAAGCACAAGCCATAAAATGAATAGCTGTAGTTTATAAATAggactgataaaaaaataaaaaaaaaagttacatatgGCTGTTGATGTTATTTTCATTAGAGGTCTTTTTCACTTTTGTGGTTTAATAAAAAtttctaaaaatc

Function

NR:

description
regulator of G-protein signaling rgs-7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217257.1 True 3328 mRNA 0.42 6 6716739 6725694

Neighbor

gene id symbol gene type direction distance location
c19h6orf47 LOC107711334,LOC107677470,LOC107584299,LOC107595602,LOC107754833,LOC107694340 coding downstream 14539 6696902 ~ 6702200 (-)
vars2 vars2,LOC107584340 coding downstream 20371 6672539 ~ 6696368 (-)
mgat1b LOC107694344,LOC107754829,LOC107677460,LOC107711329 coding downstream 46353 6660812 ~ 6670386 (-)
gtf2h4 gtf2h4,LOC107694324,LOC107584301,LOC107595596,LOC107677462 coding downstream 68497 6640009 ~ 6648242 (-)
gabbr1b gabbr1b,gabbr1,LOC107677456,LOC107584305,LOC107595614 coding downstream 91685 6519866 ~ 6625054 (-)
LOC122323845 LOC107584339 coding upstream 36381 6762075 ~ 6765872 (-)
adcy2b adcy2b,adcy2,LOC107694336,LOC107691497,LOC107595616,LOC107711297 coding upstream 44177 6769871 ~ 6821321 (-)
tent4a papd7,LOC107694334,LOC107691498 coding upstream 109192 6834886 ~ 6849688 (-)
ube2ql1 ube2ql1,LOC107711339,LOC107754840,LOC107691500 coding upstream 163577 6889271 ~ 6899805 (-)
irx1b irx1,irx1b,LOC107754808,LOC107584361,LOC107711312,LOC107691543,LOC107595626 coding upstream 252121 6977815 ~ 6981426 (-)
LOC122323439 NA non-coding downstream 8674 6702483 ~ 6708065 (-)
G131153 NA non-coding downstream 12296 6693892 ~ 6704443 (-)
LOC122324261 NA non-coding downstream 12802 6703871 ~ 6703937 (-)
LOC122324260 NA non-coding downstream 13350 6703323 ~ 6703389 (-)
G131114 NA non-coding downstream 276657 6438205 ~ 6440082 (-)
G131165 NA non-coding upstream 28720 6754414 ~ 6755435 (-)
G131166 NA non-coding upstream 34480 6760174 ~ 6760448 (-)
LOC122324041 NA non-coding upstream 158268 6883962 ~ 6885443 (-)
G131265 mrpl36 non-coding upstream 317813 7043507 ~ 7044962 (-)
G131296 NA non-coding upstream 480495 7206189 ~ 7254556 (-)
polr1h znrd1,LOC107584303,LOC107754832,LOC107677479,LOC107694346,LOC107595594 other downstream 67350 6648390 ~ 6649389 (-)
sh3bp5lb sh3bp5lb,LOC107711328,LOC107677461,LOC107694325,LOC107754828,LOC107584304,LOC108435520 other downstream 77519 6627598 ~ 6639220 (-)
G131006 LOC107754818,LOC107731580 other downstream 353567 6362347 ~ 6363172 (-)
LOC122324254 NA other downstream 1311103 5404516 ~ 5405636 (-)
G130763 NA other downstream 1464550 5245353 ~ 5252189 (-)
srd5a1 srd5a1,LOC107691541,LOC107711310,LOC107595623,LOC107694335 other upstream 124675 6850369 ~ 6858660 (-)
LOC122323893 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other upstream 630927 7356621 ~ 7360143 (-)
LOC122324169 si:dkeyp-46h3.1,LOC107694323,LOC107584363,LOC107691540,LOC107754838 other upstream 669486 7395180 ~ 7397946 (-)
LOC122323248 LOC107687071 other upstream 720064 7445758 ~ 7451916 (-)
G131373 NA other upstream 876439 7602133 ~ 7605143 (-)

Expression


Co-expression Network