LOC122323471 (LOC107738589,LOC107571461,LOC107672867,LOC107598215,LOC107731566,LOC107702687)


Basic Information

Item Value
gene id LOC122323471
gene name LOC107738589,LOC107571461,LOC107672867,LOC107598215,LOC107731566,LOC107702687
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5515027 ~ 5519834 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217324.1
ATGGAGGAGAGATTCCCTTTCCATTACTCTTTATTGGAATACCTGTTTACTTTATTGGGACTTTTATTGTTCCTGTTGGATATAGCACTGGACATTTGGACTGTTGTGTCTTTTTATCAGGACGGGGCATATGTGTACATGGCAGTGATGATCTTTCTGCTGCTGGGTTCTTCAGTGTTGTTACAGGTCTTCAGCTGGCTCTGGTACTCTGATTCTCTGGATAGGATCGAGACTAACGTGGAGAAATTTGCAAACAAGCATTTATTGATCAACCCAATACACTTCCTGCAGCTCGGAGTCTACCTCAGGTATGCTGGGGTGATAGAGATTTCCACAACACATTTTCTTCGGCACACTAACAGTTTCACAGAGGGTGTAGCTGTGTACCTGAACTATGATCTTCTGATGCTTCGACTGTTTGAGACATTTTCTGAAAACGCCCCACAACTCACACTCATGATGTCTATAATCCTACAGAGAGGAGAGCTGGAGATTATTACAGGTTTAAAAATCCTCACATCAGCTGCTGCGATTGCCAGTAGTGTTGCTATGTACCACCGCGGCATGCGTGCCTTTCTTCCCGAAAAACGCAAGATGAGTTGGATCTCCACAGGGATTTATTTCCTGTGGAACTTGTTGGTGATTATTCCCCGTGTATCTGCTCTGGCGCTCTTCTGCAGTGTGTTGCCATGCTACATCATAGCTCACTTCCTGTCTTGGTGGATGCTTCTGTTTTTAGCGGCCTGGAGCcagaaaacaaattacatgGAACATTCTGGTTGGGAATGGCTCTTCAGAGCTGCTGTTGGACTCATCTGGTACTTCTGCTGGTTTAACATATCAACAGGAAGCATAAAATCAAAGACAATTCTGTATTATAGTTTGATGGCTTTGGACACAGTGATGCTGCTGGGCTTCTGGTGCTGGAAGGTGTTTGAGTATGCAGGATGCTGGAGCTCTTTAAGTCCTTACGTGGTGATCCCGACACTACTGGGTTTGTATGTCATTGGAATACTAGTGAAAATTATATACTACAGATGGTTTCATCCAAACTGtgatgaaaagaaaatctcTGAACCCACTGAAAGGCAGTCTACATTTGCGCCAGCATGTTATAACATTGAGACGGACGCAAACCAAAGGCCTTTCCTTTGTGCTATAGCTGCAGctcctgctcctgctcctgctcctgCTGAACCGCTCACTGGAGTTCCTAGTAGACATAGGAAAATGGCTGCTAATTTCTACTCTTAGTTCTTGGATATACTTTTAAAAGACTCTCACCCATGTATCCCCTGTGattttatcataatatattaaaattaatgttttatttttaaaaaaggtatttaTAATCTGTTTTTCTACACAGAATACATCCTTTTTGTacaatgttttgaataaaataacattttagattgtgaacgtaatatattttattttctataaaaagaaaacattttaacatctcTTTAAATATTGATCTAGTTTCTGTTGTGTAAATGAACACGTTACCATTCTTTGTCCCATTCcttaaaaacgtgtttttagcttttgaaatgtttaagaGATTAAGATGTAAATTAACGGATTCTGACTATCAgataacagtaataaaataaataattaaataaaagaacaataaGCACAACAGAGGTAAAATGAAGCCCTGCTGCCGGAGAACTCCCGTATCTTCCTGCAGACTTCAGATTCATCCCTGCTTCCAAACACCCGTCCGTAATTAAGTGGCCCTGAacaccttgattagctgcttcaggtttGTTTAATTCTGTTTAGAACTGATGTCTGCAGTATGGTAGCTCTCTAAGAGCAGACACTTGTTAAGCATATTACGacaaaactcatttttttgCTCAAACCGGTTAGATGTTATACTCAAACGTTTCTATCGTCGAAATGTCTTTTGACCAGTAGGCGGCATTGTGCCAAAACTACTCAGGTCATGTTTGTTCTAAAAAGTTTGGACATAATCCTTTAAAGCTCATGTCCATTTTTTATAACAAACCTCTATGCtgataatcaatca

Function

NR:

description
PREDICTED: XK-related protein 8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217324.1 True 2047 mRNA 0.40 3 5515027 5519834

Neighbor

gene id symbol gene type direction distance location
LOC122323472 LOC107598215 coding downstream 4371 5506052 ~ 5510656 (-)
LOC122323473 LOC107672812,LOC107598225 coding downstream 10622 5501265 ~ 5504405 (-)
LOC122324255 NA coding downstream 110127 5404769 ~ 5404900 (-)
si:dkey-154b15.1 NA coding downstream 111896 5398274 ~ 5403131 (-)
myo1g si:dkeyp-92c9.3,LOC107672858,LOC107702514,LOC107731552,LOC107738593,LOC107571466,LOC107598227 coding downstream 117464 5360053 ~ 5397563 (-)
xkr8.3 LOC107598214,LOC107731550,LOC107702601,LOC107738589,LOC107672867 coding upstream 3246 5523080 ~ 5527170 (-)
ptp4a3a ptp4a3,LOC107702466,LOC107571462,LOC107598212,LOC107731571,LOC107738588,LOC108272580,LOC103031245 coding upstream 66703 5586537 ~ 5609859 (-)
rims3 rims3,LOC107672861,LOC107598211,LOC107702460,LOC107571463,LOC107731575 coding upstream 94434 5614268 ~ 5670371 (-)
glcci1a glcci1,LOC107702447,LOC107731573 coding upstream 155651 5675485 ~ 5705310 (-)
umad1 si:dkey-119m17.2,umad1,LOC107598207,LOC107568281 coding upstream 186315 5706149 ~ 5716287 (-)
G130804 NA non-coding downstream 74162 5440426 ~ 5440865 (-)
G130801 NA non-coding downstream 81098 5433562 ~ 5433929 (-)
G130764 NA non-coding downstream 161765 5345595 ~ 5353262 (-)
G130768 NA non-coding downstream 240106 5271840 ~ 5274921 (-)
LOC122323253 NA non-coding downstream 274946 5237309 ~ 5240081 (-)
G130827 NA non-coding upstream 1105 5520939 ~ 5522966 (-)
G130880 NA non-coding upstream 154720 5674554 ~ 5674878 (-)
G130914 NA non-coding upstream 226014 5745848 ~ 5876713 (-)
G130920 NA non-coding upstream 232751 5752585 ~ 5883367 (-)
LOC122324223 NA non-coding upstream 318959 5838793 ~ 5847759 (-)
LOC122324254 NA other downstream 109391 5404516 ~ 5405636 (-)
G130744 sema4ab,LOC107702572,LOC107672813,LOC107598230,LOC107731578,LOC107705066 other downstream 254863 5141505 ~ 5260164 (-)
G130763 NA other downstream 262838 5245353 ~ 5252189 (-)
LOC122323502 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other downstream 292144 5087244 ~ 5222883 (-)
G130696 NA other downstream 573195 4743572 ~ 4941832 (-)
G131006 LOC107754818,LOC107731580 other upstream 842513 6362347 ~ 6363172 (-)
sh3bp5lb sh3bp5lb,LOC107711328,LOC107677461,LOC107694325,LOC107754828,LOC107584304,LOC108435520 other upstream 1107764 6627598 ~ 6639220 (-)
polr1h znrd1,LOC107584303,LOC107754832,LOC107677479,LOC107694346,LOC107595594 other upstream 1128556 6648390 ~ 6649389 (-)
srd5a1 srd5a1,LOC107691541,LOC107711310,LOC107595623,LOC107694335 other upstream 1330535 6850369 ~ 6858660 (-)
LOC122323893 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other upstream 1836787 7356621 ~ 7360143 (-)

Expression


Co-expression Network