LOC122323487 (LOC107694355,LOC107754822,LOC107595588,LOC107711322)


Basic Information

Item Value
gene id LOC122323487
gene name LOC107694355,LOC107754822,LOC107595588,LOC107711322
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6435232 ~ 6443128 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217346.1
CACGCCACGAGAGGAGCCTGATGGGAGAAAAGATTAAGCAAATATGaagagataaataaatgacagttaAAGCAGTGGGAGGGGCCTAACAAGGAAAAAAGAGCGAAGGTTGTGGCAACAGCAGGCATGACTGAAAGGAAACTGAGGCAGGCACAATGAGACACACGAGGAGATGGATTTGCCGTCTCATTCACTCTCTGTTCTTCAGCAGTCAAACATGTCTGCTGTATTAACAGTCTAGCAAAGCTTGCAGGCAGCGGTGGAGTCAGCCGTGATTGCTATCGTGTCGGTTTCTGTGCTTGCAGGCAGCGCTCTGTGCTGAAAGTATCGACTGAGACAAGCTGGGCCCCAGCAGCAGGTCCTGACAGTGGCCGTCACCATGGAGGAGAGGGAGCGGCAGTGTAACGGAGAGGAAAGAGGTGGTGTTGAATCCCCCACAGGACAGTCCCTCGCAGCAGGAGAACCAGGCACAGCGTGCACGTGGAGGAATGGTCAGTGTGTGGCGTCTGTGTCCACATCCACATGGTTCACACCCACGTTTGACTTCTCACTCTGCAGGACTCTTCTGGAAACCAAAGGCTTCCAGATTCCAGCAGAGGACTTTGAGGGTCCGCTTCGTTTAGCGCTGGACCACCCGTCCGTCAGAAGATACCTGCTTTTCAACTCGAGCATTTTTAATGTCATCATAGCACCCGTCTTGTATGTGGTGCTGTGGTGCGCCGTGTACTCCACCCTTCACATGTACCTCGAGGCCAGCACAGCAGACTTCTGGgtgctctgtctgtgtgtcagtCTGGTGTCCGTGATCCTCGCCGCCGCCATCAACCTCATCTTTCACTACAGCAACAAAGAGATCAACATGAACACAGACGTGCGTTTGGTGGGGGTTAATGAGCACGTGGTCAGACACAAGCTGCTGCTGGGAGTGGCTGACTGGGTCCAGAAATGCAGAGGAAACCTGCAGCTCTTCTGTGTTTACTGGGACATGGCCCCGTGTCTGATGTCTCTGACTGAAGCGCTGGACAACATGAGTTTTGTCACGGATCAAGTACAGaagaaactgaagaaaagaaTGTCCCACCTAGTCCTAGTGACCGAGGTCACGACCCTGGATCCTGAGGCTGGGCTACAAGATGACGAGCTCCCCGATGAAGAGCAGCCGCTGCTGCTGGAGGCCCGAGAGAGAAGCTCTTCAGCTAGTCAACGGGAAGACTCCAAACTCACCAAAACCTTCAGCTTGATGCCTGACACCACTCGCTCAAACCAGGCGATCGCTCAGCAGCTCCTGATGACCTACAGCGCACTTTATGTCAGACTGCTGGTATCAAACAAGCTTCCTGCTCGTCCCCAGTGGCCTTCTGGTGCAGGGAAAAATCACTgcacttcctgtctgtgtctgtgcgAGTATGTGGAGCTGAAGGTCCTGCAGTAGACAGACGATCATGACTATCAAATCTCACATTCAAAAGTATTAGTCATCCATTTCTCTGGGACGATTGTTTTGCTGTCAGTTATGATATAGTCACAGACTGTTCCTGCTGCTCTTCAAACTGTTATGATTTCatctgtgaaatatatataaatatttgtttcctGA
>XM_043217347.1
CACGCCACGAGAGGAGCCTGATGGGAGAAAAGATTAAGCAAATATGaagagataaataaatgacagttaAAGCAGTGGGAGGGGCCTAACAAGGAAAAAAGAGCGAAGGTTGTGGCAACAGCAGGCATGACTGAAAGGAAACTGAGGCAGGCACAATGAGACACACGAGGAGATGGATTTGCCGTCTCATTCACTCTCTGTTCTTCAGCAGTCAAACATGTCTGCTGTATTAACAGTCTAGCAAAGCTTGCAGGCAGCGGTGGAGTCAGCCGTGATTGCTATCGTGTCGGTTTCTGTGCTTGCAGGCAGCGCTCTGTGCTGAAAGTATCGACTGAGACAAGCTGGGCCCCAGCAGGTCCTGACAGTGGCCGTCACCATGGAGGAGAGGGAGCGGCAGTGTAACGGAGAGGAAAGAGGTGGTGTTGAATCCCCCACAGGACAGTCCCTCGCAGCAGGAGAACCAGGCACAGCGTGCACGTGGAGGAATGGTCAGTGTGTGGCGTCTGTGTCCACATCCACATGGTTCACACCCACGTTTGACTTCTCACTCTGCAGGACTCTTCTGGAAACCAAAGGCTTCCAGATTCCAGCAGAGGACTTTGAGGGTCCGCTTCGTTTAGCGCTGGACCACCCGTCCGTCAGAAGATACCTGCTTTTCAACTCGAGCATTTTTAATGTCATCATAGCACCCGTCTTGTATGTGGTGCTGTGGTGCGCCGTGTACTCCACCCTTCACATGTACCTCGAGGCCAGCACAGCAGACTTCTGGgtgctctgtctgtgtgtcagtCTGGTGTCCGTGATCCTCGCCGCCGCCATCAACCTCATCTTTCACTACAGCAACAAAGAGATCAACATGAACACAGACGTGCGTTTGGTGGGGGTTAATGAGCACGTGGTCAGACACAAGCTGCTGCTGGGAGTGGCTGACTGGGTCCAGAAATGCAGAGGAAACCTGCAGCTCTTCTGTGTTTACTGGGACATGGCCCCGTGTCTGATGTCTCTGACTGAAGCGCTGGACAACATGAGTTTTGTCACGGATCAAGTACAGaagaaactgaagaaaagaaTGTCCCACCTAGTCCTAGTGACCGAGGTCACGACCCTGGATCCTGAGGCTGGGCTACAAGATGACGAGCTCCCCGATGAAGAGCAGCCGCTGCTGCTGGAGGCCCGAGAGAGAAGCTCTTCAGCTAGTCAACGGGAAGACTCCAAACTCACCAAAACCTTCAGCTTGATGCCTGACACCACTCGCTCAAACCAGGCGATCGCTCAGCAGCTCCTGATGACCTACAGCGCACTTTATGTCAGACTGCTGGTATCAAACAAGCTTCCTGCTCGTCCCCAGTGGCCTTCTGGTGCAGGGAAAAATCACTgcacttcctgtctgtgtctgtgcgAGTATGTGGAGCTGAAGGTCCTGCAGTAGACAGACGATCATGACTATCAAATCTCACATTCAAAAGTATTAGTCATCCATTTCTCTGGGACGATTGTTTTGCTGTCAGTTATGATATAGTCACAGACTGTTCCTGCTGCTCTTCAAACTGTTATGATTTCatctgtgaaatatatataaatatttgtttcctGA
>XM_043217349.1
CACGCCACGAGAGGAGCCTGATGGGAGAAAAGATTAAGCAAATATGaagagataaataaatgacagttaAAGCAGTGGGAGGGGCCTAACAAGGAAAAAAGAGCGAAGGTTGTGGCAACAGCAGGCATGACTGAAAGGAAACTGAGGCAGGCACAATGAGACACACGAGGAGATGGATTTGCCGTCTCATTCACTCTCTGTTCTTCAGCAGTCAAACATGTCTGCTGTATTAACAGTCTAGCAAAGCTTGCAGGCAGCGGTGGAGTCAGCCGTGATTGCTATCGTGTCGGTTTCTGTGCTTGCAGGTTTGTCGAAATCGCTGTAAAACCGTGATTTGAGTTCCCCGGGTCACTACGGTGAAACATTAACAGCTCCCTGAAGCATTTTCTCTGCAATATATGCAAAGGCAGCGCTCTGTGCTGAAAGTATCGACTGAGACAAGCTGGGCCCCAGCAGCAGGTCCTGACAGTGGCCGTCACCATGGAGGAGAGGGAGCGGCAGTGTAACGGAGAGGAAAGAGGTGGTGTTGAATCCCCCACAGGACAGTCCCTCGCAGCAGGAGAACCAGGCACAGCGTGCACGTGGAGGAATGGTCAGTGTGTGGCGTCTGTGTCCACATCCACATGGTTCACACCCACGTTTGACTTCTCACTCTGCAGGACTCTTCTGGAAACCAAAGGCTTCCAGATTCCAGCAGAGGACTTTGAGGGTCCGCTTCGTTTAGCGCTGGACCACCCGTCCGTCAGAAGATACCTGCTTTTCAACTCGAGCATTTTTAATGTCATCATAGCACCCGTCTTGTATGTGGTGCTGTGGTGCGCCGTGTACTCCACCCTTCACATGTACCTCGAGGCCAGCACAGCAGACTTCTGGgtgctctgtctgtgtgtcagtCTGGTGTCCGTGATCCTCGCCGCCGCCATCAACCTCATCTTTCACTACAGCAACAAAGAGATCAACATGAACACAGACGTGCGTTTGGTGGGGGTTAATGAGCACGTGGTCAGACACAAGCTGCTGCTGGGAGTGGCTGACTGGGTCCAGAAATGCAGAGGAAACCTGCAGCTCTTCTGTGTTTACTGGGACATGGCCCCGTGTCTGATGTCTCTGACTGAAGCGCTGGACAACATGAGTTTTGTCACGGATCAAGTACAGaagaaactgaagaaaagaaTGTCCCACCTAGTCCTAGTGACCGAGGTCACGACCCTGGATCCTGAGGCTGGGCTACAAGATGACGAGCTCCCCGATGAAGAGCAGCCGCTGCTGCTGGAGGCCCGAGAGAGAAGCTCTTCAGCTAGTCAACGGGAAGACTCCAAACTCACCAAAACCTTCAGCTTGATGCCTGACACCACTCGCTCAAACCAGGCGATCGCTCAGCAGCTCCTGATGACCTACAGCGCACTTTATGTCAGACTGCTGGTATCAAACAAGCTTCCTGCTCGTCCCCAGTGGCCTTCTGGTGCAGGGAAAAATCACTgcacttcctgtctgtgtctgtgcgAGTATGTGGAGCTGAAGGTCCTGCAGTAGACAGACGATCATGACTATCAAATCTCACATTCAAAAGTATTAGTCATCCATTTCTCTGGGACGATTGTTTTGCTGTCAGTTATGATATAGTCACAGACTGTTCCTGCTGCTCTTCAAACTGTTATGATTTCatctgtgaaatatatataaatatttgtttcctGA
>XM_043217350.1
GATTTGAGTTCCCCGGGTCACTACGGTGAAACATTAACAGCTCCCTGAAGCATTTTCTCTGCAATATATGCAAAGGCAGCGCTCTGTGCTGAAAGTATCGACTGAGACAAGCTGGGCCCCAGCAGGTCCTGACAGTGGCCGTCACCATGGAGGAGAGGGAGCGGCAGTGTAACGGAGAGGAAAGAGGTGGTGTTGAATCCCCCACAGGACAGTCCCTCGCAGCAGGAGAACCAGGCACAGCGTGCACGTGGAGGAATGGTCAGTGTGTGGCGTCTGTGTCCACATCCACATGGTTCACACCCACGTTTGACTTCTCACTCTGCAGGACTCTTCTGGAAACCAAAGGCTTCCAGATTCCAGCAGAGGACTTTGAGGGTCCGCTTCGTTTAGCGCTGGACCACCCGTCCGTCAGAAGATACCTGCTTTTCAACTCGAGCATTTTTAATGTCATCATAGCACCCGTCTTGTATGTGGTGCTGTGGTGCGCCGTGTACTCCACCCTTCACATGTACCTCGAGGCCAGCACAGCAGACTTCTGGgtgctctgtctgtgtgtcagtCTGGTGTCCGTGATCCTCGCCGCCGCCATCAACCTCATCTTTCACTACAGCAACAAAGAGATCAACATGAACACAGACGTGCGTTTGGTGGGGGTTAATGAGCACGTGGTCAGACACAAGCTGCTGCTGGGAGTGGCTGACTGGGTCCAGAAATGCAGAGGAAACCTGCAGCTCTTCTGTGTTTACTGGGACATGGCCCCGTGTCTGATGTCTCTGACTGAAGCGCTGGACAACATGAGTTTTGTCACGGATCAAGTACAGaagaaactgaagaaaagaaTGTCCCACCTAGTCCTAGTGACCGAGGTCACGACCCTGGATCCTGAGGCTGGGCTACAAGATGACGAGCTCCCCGATGAAGAGCAGCCGCTGCTGCTGGAGGCCCGAGAGAGAAGCTCTTCAGCTAGTCAACGGGAAGACTCCAAACTCACCAAAACCTTCAGCTTGATGCCTGACACCACTCGCTCAAACCAGGCGATCGCTCAGCAGCTCCTGATGACCTACAGCGCACTTTATGTCAGACTGCTGGTATCAAACAAGCTTCCTGCTCGTCCCCAGTGGCCTTCTGGTGCAGGGAAAAATCACTgcacttcctgtctgtgtctgtgcgAGTATGTGGAGCTGAAGGTCCTGCAGTAGACAGACGATCATGACTATCAAATCTCACATTCAAAAGTATTAGTCATCCATTTCTCTGGGACGATTGTTTTGCTGTCAGTTATGATATAGTCACAGACTGTTCCTGCTGCTCTTCAAACTGTTATGATTTCatctgtgaaatatatataaatatttgtttcctGA

Function

NR:

description
PREDICTED: transmembrane protein C9orf91-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217346.1 False 1597 mRNA 0.51 11 6435232 6443128
XM_043217347.1 False 1594 mRNA 0.51 11 6435232 6443128
XM_043217349.1 True 1698 mRNA 0.51 11 6435232 6443128
XM_043217350.1 False 1364 mRNA 0.52 10 6435666 6443128

Neighbor

gene id symbol gene type direction distance location
gon4la LOC107754817,LOC107694363,LOC107584344 coding upstream 57633 6365518 ~ 6377599 (+)
ints3 ints3,LOC107754816,LOC107584314,LOC107731564,LOC107694364,LOC107677482 coding upstream 74040 6346789 ~ 6361192 (+)
npr1a npr1a,npr1,LOC107694365,LOC107677481,LOC107754786,LOC107731544,LOC108435512 coding upstream 90972 6266383 ~ 6344260 (+)
mylipa mylipa,LOC107754815,LOC107694366,LOC107584315,LOC107731572 coding upstream 182893 6234025 ~ 6252339 (+)
jarid2b jarid2b,LOC107754814,LOC107694367,LOC107702394,LOC107731546 coding upstream 272689 6061549 ~ 6162543 (+)
nelfe nelfe,LOC107754803,LOC107584366,LOC107694353,LOC107677468,LOC107595590,LOC107711324 coding downstream 30481 6473609 ~ 6477150 (+)
tnfa LOC107694347 coding downstream 71972 6515100 ~ 6517362 (+)
ddx39b ddx39b,LOC107584302,LOC107754831,LOC107694345,LOC107595593,LOC103042292,LOC108272881 coding downstream 206171 6649299 ~ 6659826 (+)
atat1 atat1,LOC107584296,LOC107694337,LOC107754836,LOC107711335,LOC107677465,LOC107595600 coding downstream 261712 6704840 ~ 6716985 (+)
c19h5orf49 si:dkeyp-46h3.1,LOC107694323,LOC107584363,LOC107691540,LOC107754838 coding downstream 324513 6767641 ~ 6769745 (+)
G131016 LOC107677454,LOC107595587,LOC107584310,LOC107694359,LOC107754821 non-coding upstream 25491 6405385 ~ 6409741 (+)
G131010 NA non-coding upstream 41275 6392916 ~ 6393957 (+)
G130950 NA non-coding upstream 100988 6331665 ~ 6334244 (+)
LOC122324219 NA non-coding upstream 171278 6255006 ~ 6263954 (+)
G130944 NA non-coding upstream 207145 6227746 ~ 6228087 (+)
G131093 LOC107694325,LOC107711328,LOC107754828,LOC107584304,LOC107677461,LOC107595615 non-coding downstream 195353 6638481 ~ 6639229 (+)
G131241 NA non-coding downstream 513441 6956569 ~ 6956786 (+)
G131245 NA non-coding downstream 533402 6976530 ~ 6976854 (+)
G131249 NA non-coding downstream 538822 6981950 ~ 6982175 (+)
G131252 NA non-coding downstream 570761 7013889 ~ 7014418 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other upstream 33934 6371835 ~ 6401298 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other upstream 512259 5785130 ~ 5922973 (+)
LOC122323254 sdhaf3,LOC107702681 other upstream 682315 5745801 ~ 5752917 (+)
LOC122324139 LOC107598234,LOC107672810 other upstream 849577 5583505 ~ 5585655 (+)
G130640 txnipa,txnip,LOC108410889,LOC107672857,LOC107738596 other upstream 1121054 5223700 ~ 5314178 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other downstream 19955 6463083 ~ 6488760 (+)
G131042 gabbr1b,LOC107595614,LOC107677456,LOC107584305 other downstream 76792 6519920 ~ 6526080 (+)
ppp1r11 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other downstream 248846 6691974 ~ 6696204 (+)
G131183 NA other downstream 390741 6833869 ~ 6836858 (+)
med10 med10,LOC107691542,LOC107595625,LOC107584362 other downstream 457507 6900635 ~ 6902398 (+)

Expression


Co-expression Network