vars2 (vars2,LOC107584340)


Basic Information

Item Value
gene id vars2
gene name vars2,LOC107584340
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6672539 ~ 6696368 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217376.1
AATCCATTCTGTGCCGCTAAACGCCGGTTGTCATTTTCCATGTGACTGGTCCAAAACATTTCCCCCGAAGCTCCTGAGCTCTATTAACAATACATCGACTGAATCATTATATGAATACACATTCCATAAGGACTCAACAGAATCAGGATGAGAGTCAAACGCAGTCGGGTTGCCATTAAGCATTTAATAGatataaacaacataatttaacatctgtttatttgtgttaaaTCCACTCTATGACCTTTGCTATGTACATACAGGTGCGTTCACAGTAAAGGGACGACAGATGCAGGTGAATGCTGGGATGCAGATGACTGCAGTGACGGTCCTGATGGGGGTCGACTGTAAACTGCATGTGACATCGGTGGAGAGCTTCAGTGTGAAACACTCCAGATTTCGGGACATGTGGATGGCTGTGCATGTGGCATCACCCAGAGTCTGGAGCAGGGATCTTCAGAAGGCCTGGAGCACATGGGGATGCAGACTCTGCTCTCAAAGCTCATCTAGCACGCAGTCTTCACAGAATCCCAGGACACAAGCGGAGAAAGCCAAACGCAGACAAGCACGGGAGAAGGCCATACTCAGTGGTGATGCCAGTGGTCCTGGACTAATTTGGTcagataaagagaaaataacGTACACTGCTGCCCTTGTTCCTGGAGAAAAGAAAGACACCTCTCTGCCCTTTCCACAATCCTACAGCCCTGAATATGTGGAGTTTGGCTGGTATCAGTGGTGGGAGAAACAGGGATTCTTCAGGCCTGAGCAGCATAGTAAACAGCCCCATGCTGTTGATAAATATTTCTCCTTATGTATTCCACCGCCGGACGTGACCGGCACTTTACATCTCGGGCACGCGCTGACAGTGGCTATAGAAGATGCTTTGGCTCGCTGGCGACGGATGCAGGGCTACAAGGTCCTCTGGGTTCCCGGCTGTGACCATGCTGGGATCGCAACACAGTCAGTGGTTGAGAGGAAGCTGATGAGGGAGCAGGGGAAGTGCAGACGGGACTACAGTAGAGAGGAGTTCCTCAACCAGGTCTACAGATGGAAAGATGAaaaggGGGATGAAATTTATCATCAGCTGAGAAAACTTGGTTCATCTCTTGACTGGAACAGAGCATGTTTTACAATGGATCCGGGTTTCAGCAGTGCTGTGACGGAGGCCTTTGTCAGGCTGTGTGACTCTGGGCTCATCTATCGCTCTGAAGGTCTGGTCAACTGGAGCTGTGCTTTAGAGTCGGCCATCTCAGACATCGAGGTGGACTCTATGGATCTCTCGGGCAGGACTCTTCTGTCCGTTCCCGGTTATCAGCAGAAAGTGGAGTTTGGGATCATGCTTACATTTGCTTATCCACTGGAGGGACAGGgagGAGAGGTTGCGGTTTCAACCACACGTCCAGAGACGATGCTGGGAGACGTGGCTATTGCTGTTCATCCTGATGACCCTCGATATAAAGATCTTCATGGCAAACACTGCAGGCATCCATTCACAGAGCGCTTATTACCCATCGTCACTGACTCCATAGTGGATATGACTTTTGGCACAgGTGCTGTTAAAGTGACACCAGCTCATGACCACACTGACTTCCTGCTGTCTCAGAGACACTCACTCCCTCGCCTCACTGTGATTGGAGGAGACGGGGCTATGACCTCAGACTGCGGCCAATGGCTAGAGGGTGTTAAGCGATTTGATGCCAGGGAACGTGTAATTACTGCTCTGATGGAGAGGAAGCTGTTCAGAGGAAAGAAGGATCATCCCATGTCATTACCCATCTGCAGTCGTTCTGGAGATGTCATTGAACCGTTGCTGAAGAAACAGTGGTTCGTGCGCTGTCAGGAAATGGGCAGAAAAGCAGTTCAAGCGGTGGAAGAAGGAGAGCTACAGATAATTCCTcacttttacacaaaaatgtggAAGAGCTGGCTGTCCAACATCGgCGATTGGTGTATTTCCAGACAGCTTTGGTGGGGTCACCAGATACCGGCCTATCGAGTGACCGTGGACAACTCAAAGGACACAGAGGAGCAGGAGCAGTGGGTTTGGGGCAGAAGTGCTGCAGAGGCCCGACAGCGTGCCGCTGTGAAGTTTGGGGTCAATCCTGACGCCATCACACTCACACaggACCCAGATGTGCTTGATACCTGGTTCTCTTCTGGTCTCTTCCCGTTCGCGATGCTCGGCTGGCCTCAGCAGACAGAAGACTTGAGACAGTTCTACCCCAATTCCATTCTGGAAACAGGAAGTGACCTCATCTTCTTTTGGGTGGCCAGGATGGTGATGCTAGGCAGAGAGTTGACGGGCCAGCTGCCCTTTAAACAGGTGCTCTTTCACTCTCTGGTGAGAGATAAATATGGGCGGAAGATGAGTAAATCCTTAGGAAACGTCATTGATCCTCTTGATGTCATCTCAGGGGTTTCTTTTGAGAGACTTCAAGAGAAAGTCAAAGAAGGAAACTTGGATCCGAGGGAAAGCGTTGTTGCCATGGAAGCACAGAAGAAAGATTTCCCCAAAGGGATTCCTGAGTGCGGGACGGATGCTTTGAGGTTTGCACTCTGCTCTTATAAAGCCCAGGGAGAAGATATCAGCCTGTCTGTGTCTCATGTGCTGGGCTGTAGACATTTCTGTAATAAGATGTGGCAGACAGTGCGCTTCACCCTCGCCATGCTGCATGATGCAAGTTTACCGACACCATTAGCAGAGACCCATCCTCTATCCAGCATGGACAAGTGGATCTGTTCACGTCTGTACAGCACCGTGCAGCAGTGTGAGAGGGGTTTGGAGAACTACGAGCTCCACATGGTCACATCGGCACTGCACTCTTTCTGGCTGCACAGTCTGTGTGATGTCTACCTGGAAAGCATCAAGCCGCTGTTGAAAGGTGAAGGCTCTGGTTGTGAGGAACAGAGAGCTGGAGAGAGGCAGGCGGCCATGTCTGTGTTGTATCACGCCGTGTCCGTCTCTCTCACGCTCCTCTCACCCTTCATGCCGTTCCTCACGGAGGAGCTGTGGCAGAGACTCCTGCCTTACGCTAACTCTGACGGGACGCCCCGCAGCCTGTGTGTGCAGCCCTACCCAAAGACATCACAGCTGGAGCACTGGTGTTTTCCTAAGGAGGAGGCTGACTTCTCTTTGGTTCAGGAAGTGGTCAGAGTGGCGAGGTTACTGAGGGCCCAGTGCCAGCTGACGAAGGAGAGACCCGAGTTGTGGGCGGTGTGTGCACCGGACCAGGCCGAGACGCTTCTGCGCTTCAGATCAGCGATCTGCACACTGGGCCGGATCTCAGCGTTTCATCTGCACTGTCCAGAGGCGGGTTTGAGCGACTCTCCTGCTCTGCCCAAGGCCAGGGCTGTAGGGACGGTGGATCACTCCATCTGCTTATATCTCAGCATTCAGAATGCTATTAATGCTGACAAACAGGGAGCTCTCCTCTCTCAGCGCAGAGAGAAGCTGGCCTCCAAACTAAAACAAGCCCTCGCTCACACCCAGATGCCCAACTATGCAGAAGAAGTACCTCATAGAGTCAGACAGAAGACAGAGAAAAAGattgcagCCATGGAGCTGGAGCTGAAGAACACCGAGGACCAACTTTTGGCTTTGGAAGACACGAGGAAAGAAGTCTAATggacaaaatattacattcaatCAACAACCAGCGAAAAAGAATACTTTGTACGGAAGCCTTGCAATGgacaatgaaaaaaagcaaaaaagctaGTGTATATTAATAAAGTTGGTTTGGATGTAATACATgcacaataaattatttacaaaagaa
>XM_043217377.1
TCCATTCTGTGCCGCTAAACGCCGGTTGTCATTTTCCATGTGACTGGTCCAAAACATTTCCCCCGAAGCTCCTGAGCTCTATTAACAATACATCGACTGAATCATTATATGAATACACATTCCATAAGGACTCAACAGAATCAGGATGAGAGTCAAACGCAGTCGGGTTGCCATTAAGCATTTAATAGatataaacaacataatttaacatctgtttatttgtgttaaaTCCACTCTATGACCTTTGCTATGTACATACAGGTGCGTTCACAGTAAAGGGACGACAGATGCAGGTGAATGCTGGGATGCAGATGACTGCAGTGACGGTCCTGATGGGGGTCGACTGTAAACTGCATGTGACATCGGTGGAGAGCTTCAGTGTGAAACACTCCAGATTTCGGGACATGTGGATGGCTGTGCATGTGGCATCACCCAGAGTCTGGAGCAGGGATCTTCAGAAGGCCTGGAGCACATGGGGATGCAGACTCTGCTCTCAAAGCTCATCTAGCACGCAGTCTTCACAGAATCCCAGGACACAAGCGGAGAAAGCCAAACGCAGACAAGCACGGGAGAAGGCCATACTCAGTGGTGATGCCAGTGGTCCTGGACTAATTTGGTcagataaagagaaaataacGTACACTGCTGCCCTTGTTCCTGGAGAAAAGAAAGACACCTCTCTGCCCTTTCCACAATCCTACAGCCCTGAATATGTGGAGTTTGGCTGGTATCAGTGGTGGGAGAAACAGGGATTCTTCAGGCCTGAGCAGCATAGTAAACAGCCCCATGCTGTTGATAAATATTTCTCCTTATGTATTCCACCGCCGGACGTGACCGGCACTTTACATCTCGGGCACGCGCTGACAGTGGCTATAGAAGATGCTTTGGCTCGCTGGCGACGGATGCAGGGCTACAAGGTCCTCTGGGTTCCCGGCTGTGACCATGCTGGGATCGCAACACAGTCAGTGGTTGAGAGGAAGCTGATGAGGGAGCAGGGGAAGTGCAGACGGGACTACAGTAGAGAGGAGTTCCTCAACCAGGTCTACAGATGGAAAGATGAaaaggGGGATGAAATTTATCATCAGCTGAGAAAACTTGGTTCATCTCTTGACTGGAACAGAGCATGTTTTACAATGGATCCGGGTTTCAGCAGTGCTGTGACGGAGGCCTTTGTCAGGCTGTGTGACTCTGGGCTCATCTATCGCTCTGAAGGTCTGGTCAACTGGAGCTGTGCTTTAGAGTCGGCCATCTCAGACATCGAGGTGGACTCTATGGATCTCTCGGGCAGGACTCTTCTGTCCGTTCCCGGTTATCAGCAGAAAGTGGAGTTTGGGATCATGCTTACATTTGCTTATCCACTGGAGGGACAGGgagGAGAGGTTGCGGTTTCAACCACACGTCCAGAGACGATGCTGGGAGACGTGGCTATTGCTGTTCATCCTGATGACCCTCGATATAAAGATCTTCATGGCAAACACTGCAGGCATCCATTCACAGAGCGCTTATTACCCATCGTCACTGACTCCATAGTGGATATGACTTTTGGCACAgGTGCTGTTAAAGTGACACCAGCTCATGACCACACTGACTTCCTGCTGTCTCAGAGACACTCACTCCCTCGCCTCACTGTGATTGGAGGAGACGGGGCTATGACCTCAGACTGCGGCCAATGGCTAGAGGGTGTTAAGCGATTTGATGCCAGGGAACGTGTAATTACTGCTCTGATGGAGAGGAAGCTGTTCAGAGGAAAGAAGGATCATCCCATGTCATTACCCATCTGCAGTCGTTCTGGAGATGTCATTGAACCGTTGCTGAAGAAACAGTGGTTCGTGCGCTGTCAGGAAATGGGCAGAAAAGCAGTTCAAGCGGTGGAAGAAGGAGAGCTACAGATAATTCCTcacttttacacaaaaatgtggAAGAGCTGGCTGTCCAACATCGgCGATTGGTGTATTTCCAGACAGCTTTGGTGGGGTCACCAGATACCGGCCTATCGAGTGACCGTGGACAACTCAAAGGACACAGAGGAGGAGCAGTGGGTTTGGGGCAGAAGTGCTGCAGAGGCCCGACAGCGTGCCGCTGTGAAGTTTGGGGTCAATCCTGACGCCATCACACTCACACaggACCCAGATGTGCTTGATACCTGGTTCTCTTCTGGTCTCTTCCCGTTCGCGATGCTCGGCTGGCCTCAGCAGACAGAAGACTTGAGACAGTTCTACCCCAATTCCATTCTGGAAACAGGAAGTGACCTCATCTTCTTTTGGGTGGCCAGGATGGTGATGCTAGGCAGAGAGTTGACGGGCCAGCTGCCCTTTAAACAGGTGCTCTTTCACTCTCTGGTGAGAGATAAATATGGGCGGAAGATGAGTAAATCCTTAGGAAACGTCATTGATCCTCTTGATGTCATCTCAGGGGTTTCTTTTGAGAGACTTCAAGAGAAAGTCAAAGAAGGAAACTTGGATCCGAGGGAAAGCGTTGTTGCCATGGAAGCACAGAAGAAAGATTTCCCCAAAGGGATTCCTGAGTGCGGGACGGATGCTTTGAGGTTTGCACTCTGCTCTTATAAAGCCCAGGGAGAAGATATCAGCCTGTCTGTGTCTCATGTGCTGGGCTGTAGACATTTCTGTAATAAGATGTGGCAGACAGTGCGCTTCACCCTCGCCATGCTGCATGATGCAAGTTTACCGACACCATTAGCAGAGACCCATCCTCTATCCAGCATGGACAAGTGGATCTGTTCACGTCTGTACAGCACCGTGCAGCAGTGTGAGAGGGGTTTGGAGAACTACGAGCTCCACATGGTCACATCGGCACTGCACTCTTTCTGGCTGCACAGTCTGTGTGATGTCTACCTGGAAAGCATCAAGCCGCTGTTGAAAGGTGAAGGCTCTGGTTGTGAGGAACAGAGAGCTGGAGAGAGGCAGGCGGCCATGTCTGTGTTGTATCACGCCGTGTCCGTCTCTCTCACGCTCCTCTCACCCTTCATGCCGTTCCTCACGGAGGAGCTGTGGCAGAGACTCCTGCCTTACGCTAACTCTGACGGGACGCCCCGCAGCCTGTGTGTGCAGCCCTACCCAAAGACATCACAGCTGGAGCACTGGTGTTTTCCTAAGGAGGAGGCTGACTTCTCTTTGGTTCAGGAAGTGGTCAGAGTGGCGAGGTTACTGAGGGCCCAGTGCCAGCTGACGAAGGAGAGACCCGAGTTGTGGGCGGTGTGTGCACCGGACCAGGCCGAGACGCTTCTGCGCTTCAGATCAGCGATCTGCACACTGGGCCGGATCTCAGCGTTTCATCTGCACTGTCCAGAGGCGGGTTTGAGCGACTCTCCTGCTCTGCCCAAGGCCAGGGCTGTAGGGACGGTGGATCACTCCATCTGCTTATATCTCAGCATTCAGAATGCTATTAATGCTGACAAACAGGGAGCTCTCCTCTCTCAGCGCAGAGAGAAGCTGGCCTCCAAACTAAAACAAGCCCTCGCTCACACCCAGATGCCCAACTATGCAGAAGAAGTACCTCATAGAGTCAGACAGAAGACAGAGAAAAAGattgcagCCATGGAGCTGGAGCTGAAGAACACCGAGGACCAACTTTTGGCTTTGGAAGACACGAGGAAAGAAGTCTAATggacaaaatattacattcaatCAACAACCAGCGAAAAAGAATACTTTGTACGGAAGCCTTGCAATGgacaatgaaaaaaagcaaaaaagctaGTGTATATTAATAAAGTTGGTTTGGATGTAATACATgcacaataaattatttacaaaagaa
>XM_043217378.1
AGGCGGGGTTTTGAGACAATGTAGTAGCGTTTGGCGTTATCTCAGCTGAACTGTGCAGCTGAGCTGTGTATCTGTTTCCACGAAAAACGCCGAAAATATAACCGTCTCAGAAAGCGCAACGCACCCTTGATGCGCACCGATGTTATCTAGCTTCAGTGTGAAACACTCCAGATTTCGGGACATGTGGATGGCTGTGCATGTGGCATCACCCAGAGTCTGGAGCAGGGATCTTCAGAAGGCCTGGAGCACATGGGGATGCAGACTCTGCTCTCAAAGCTCATCTAGCACGCAGTCTTCACAGAATCCCAGGACACAAGCGGAGAAAGCCAAACGCAGACAAGCACGGGAGAAGGCCATACTCAGTGGTGATGCCAGTGGTCCTGGACTAATTTGGTcagataaagagaaaataacGTACACTGCTGCCCTTGTTCCTGGAGAAAAGAAAGACACCTCTCTGCCCTTTCCACAATCCTACAGCCCTGAATATGTGGAGTTTGGCTGGTATCAGTGGTGGGAGAAACAGGGATTCTTCAGGCCTGAGCAGCATAGTAAACAGCCCCATGCTGTTGATAAATATTTCTCCTTATGTATTCCACCGCCGGACGTGACCGGCACTTTACATCTCGGGCACGCGCTGACAGTGGCTATAGAAGATGCTTTGGCTCGCTGGCGACGGATGCAGGGCTACAAGGTCCTCTGGGTTCCCGGCTGTGACCATGCTGGGATCGCAACACAGTCAGTGGTTGAGAGGAAGCTGATGAGGGAGCAGGGGAAGTGCAGACGGGACTACAGTAGAGAGGAGTTCCTCAACCAGGTCTACAGATGGAAAGATGAaaaggGGGATGAAATTTATCATCAGCTGAGAAAACTTGGTTCATCTCTTGACTGGAACAGAGCATGTTTTACAATGGATCCGGGTTTCAGCAGTGCTGTGACGGAGGCCTTTGTCAGGCTGTGTGACTCTGGGCTCATCTATCGCTCTGAAGGTCTGGTCAACTGGAGCTGTGCTTTAGAGTCGGCCATCTCAGACATCGAGGTGGACTCTATGGATCTCTCGGGCAGGACTCTTCTGTCCGTTCCCGGTTATCAGCAGAAAGTGGAGTTTGGGATCATGCTTACATTTGCTTATCCACTGGAGGGACAGGgagGAGAGGTTGCGGTTTCAACCACACGTCCAGAGACGATGCTGGGAGACGTGGCTATTGCTGTTCATCCTGATGACCCTCGATATAAAGATCTTCATGGCAAACACTGCAGGCATCCATTCACAGAGCGCTTATTACCCATCGTCACTGACTCCATAGTGGATATGACTTTTGGCACAgGTGCTGTTAAAGTGACACCAGCTCATGACCACACTGACTTCCTGCTGTCTCAGAGACACTCACTCCCTCGCCTCACTGTGATTGGAGGAGACGGGGCTATGACCTCAGACTGCGGCCAATGGCTAGAGGGTGTTAAGCGATTTGATGCCAGGGAACGTGTAATTACTGCTCTGATGGAGAGGAAGCTGTTCAGAGGAAAGAAGGATCATCCCATGTCATTACCCATCTGCAGTCGTTCTGGAGATGTCATTGAACCGTTGCTGAAGAAACAGTGGTTCGTGCGCTGTCAGGAAATGGGCAGAAAAGCAGTTCAAGCGGTGGAAGAAGGAGAGCTACAGATAATTCCTcacttttacacaaaaatgtggAAGAGCTGGCTGTCCAACATCGgCGATTGGTGTATTTCCAGACAGCTTTGGTGGGGTCACCAGATACCGGCCTATCGAGTGACCGTGGACAACTCAAAGGACACAGAGGAGCAGGAGCAGTGGGTTTGGGGCAGAAGTGCTGCAGAGGCCCGACAGCGTGCCGCTGTGAAGTTTGGGGTCAATCCTGACGCCATCACACTCACACaggACCCAGATGTGCTTGATACCTGGTTCTCTTCTGGTCTCTTCCCGTTCGCGATGCTCGGCTGGCCTCAGCAGACAGAAGACTTGAGACAGTTCTACCCCAATTCCATTCTGGAAACAGGAAGTGACCTCATCTTCTTTTGGGTGGCCAGGATGGTGATGCTAGGCAGAGAGTTGACGGGCCAGCTGCCCTTTAAACAGGTGCTCTTTCACTCTCTGGTGAGAGATAAATATGGGCGGAAGATGAGTAAATCCTTAGGAAACGTCATTGATCCTCTTGATGTCATCTCAGGGGTTTCTTTTGAGAGACTTCAAGAGAAAGTCAAAGAAGGAAACTTGGATCCGAGGGAAAGCGTTGTTGCCATGGAAGCACAGAAGAAAGATTTCCCCAAAGGGATTCCTGAGTGCGGGACGGATGCTTTGAGGTTTGCACTCTGCTCTTATAAAGCCCAGGGAGAAGATATCAGCCTGTCTGTGTCTCATGTGCTGGGCTGTAGACATTTCTGTAATAAGATGTGGCAGACAGTGCGCTTCACCCTCGCCATGCTGCATGATGCAAGTTTACCGACACCATTAGCAGAGACCCATCCTCTATCCAGCATGGACAAGTGGATCTGTTCACGTCTGTACAGCACCGTGCAGCAGTGTGAGAGGGGTTTGGAGAACTACGAGCTCCACATGGTCACATCGGCACTGCACTCTTTCTGGCTGCACAGTCTGTGTGATGTCTACCTGGAAAGCATCAAGCCGCTGTTGAAAGGTGAAGGCTCTGGTTGTGAGGAACAGAGAGCTGGAGAGAGGCAGGCGGCCATGTCTGTGTTGTATCACGCCGTGTCCGTCTCTCTCACGCTCCTCTCACCCTTCATGCCGTTCCTCACGGAGGAGCTGTGGCAGAGACTCCTGCCTTACGCTAACTCTGACGGGACGCCCCGCAGCCTGTGTGTGCAGCCCTACCCAAAGACATCACAGCTGGAGCACTGGTGTTTTCCTAAGGAGGAGGCTGACTTCTCTTTGGTTCAGGAAGTGGTCAGAGTGGCGAGGTTACTGAGGGCCCAGTGCCAGCTGACGAAGGAGAGACCCGAGTTGTGGGCGGTGTGTGCACCGGACCAGGCCGAGACGCTTCTGCGCTTCAGATCAGCGATCTGCACACTGGGCCGGATCTCAGCGTTTCATCTGCACTGTCCAGAGGCGGGTTTGAGCGACTCTCCTGCTCTGCCCAAGGCCAGGGCTGTAGGGACGGTGGATCACTCCATCTGCTTATATCTCAGCATTCAGAATGCTATTAATGCTGACAAACAGGGAGCTCTCCTCTCTCAGCGCAGAGAGAAGCTGGCCTCCAAACTAAAACAAGCCCTCGCTCACACCCAGATGCCCAACTATGCAGAAGAAGTACCTCATAGAGTCAGACAGAAGACAGAGAAAAAGattgcagCCATGGAGCTGGAGCTGAAGAACACCGAGGACCAACTTTTGGCTTTGGAAGACACGAGGAAAGAAGTCTAATggacaaaatattacattcaatCAACAACCAGCGAAAAAGAATACTTTGTACGGAAGCCTTGCAATGgacaatgaaaaaaagcaaaaaagctaGTGTATATTAATAAAGTTGGTTTGGATGTAATACATgcacaataaattatttacaaaagaa
>XM_043217379.1
ctttaaaacgtTCCGATAGGAAACACCAGATGCTACGAGAACTTGCATAACGTGAAGGAAATATAATCCAGTGTAATTCAACGTGTAAAAGCCTGGTGTGATTTAAAATCTTGTAATAAAACAACTGTGTGcgtttttattcaaaacattttaagtcgTATGGAATTTTAGACCTAAAAATATTAGCGGTAAAAATCACTGCCGTATCCGCAATATGTCTGCGCCCTGTGAGAGGACACACTAAAGCTTCAGTGTGAAACACTCCAGATTTCGGGACATGTGGATGGCTGTGCATGTGGCATCACCCAGAGTCTGGAGCAGGGATCTTCAGAAGGCCTGGAGCACATGGGGATGCAGACTCTGCTCTCAAAGCTCATCTAGCACGCAGTCTTCACAGAATCCCAGGACACAAGCGGAGAAAGCCAAACGCAGACAAGCACGGGAGAAGGCCATACTCAGTGGTGATGCCAGTGGTCCTGGACTAATTTGGTcagataaagagaaaataacGTACACTGCTGCCCTTGTTCCTGGAGAAAAGAAAGACACCTCTCTGCCCTTTCCACAATCCTACAGCCCTGAATATGTGGAGTTTGGCTGGTATCAGTGGTGGGAGAAACAGGGATTCTTCAGGCCTGAGCAGCATAGTAAACAGCCCCATGCTGTTGATAAATATTTCTCCTTATGTATTCCACCGCCGGACGTGACCGGCACTTTACATCTCGGGCACGCGCTGACAGTGGCTATAGAAGATGCTTTGGCTCGCTGGCGACGGATGCAGGGCTACAAGGTCCTCTGGGTTCCCGGCTGTGACCATGCTGGGATCGCAACACAGTCAGTGGTTGAGAGGAAGCTGATGAGGGAGCAGGGGAAGTGCAGACGGGACTACAGTAGAGAGGAGTTCCTCAACCAGGTCTACAGATGGAAAGATGAaaaggGGGATGAAATTTATCATCAGCTGAGAAAACTTGGTTCATCTCTTGACTGGAACAGAGCATGTTTTACAATGGATCCGGGTTTCAGCAGTGCTGTGACGGAGGCCTTTGTCAGGCTGTGTGACTCTGGGCTCATCTATCGCTCTGAAGGTCTGGTCAACTGGAGCTGTGCTTTAGAGTCGGCCATCTCAGACATCGAGGTGGACTCTATGGATCTCTCGGGCAGGACTCTTCTGTCCGTTCCCGGTTATCAGCAGAAAGTGGAGTTTGGGATCATGCTTACATTTGCTTATCCACTGGAGGGACAGGgagGAGAGGTTGCGGTTTCAACCACACGTCCAGAGACGATGCTGGGAGACGTGGCTATTGCTGTTCATCCTGATGACCCTCGATATAAAGATCTTCATGGCAAACACTGCAGGCATCCATTCACAGAGCGCTTATTACCCATCGTCACTGACTCCATAGTGGATATGACTTTTGGCACAgGTGCTGTTAAAGTGACACCAGCTCATGACCACACTGACTTCCTGCTGTCTCAGAGACACTCACTCCCTCGCCTCACTGTGATTGGAGGAGACGGGGCTATGACCTCAGACTGCGGCCAATGGCTAGAGGGTGTTAAGCGATTTGATGCCAGGGAACGTGTAATTACTGCTCTGATGGAGAGGAAGCTGTTCAGAGGAAAGAAGGATCATCCCATGTCATTACCCATCTGCAGTCGTTCTGGAGATGTCATTGAACCGTTGCTGAAGAAACAGTGGTTCGTGCGCTGTCAGGAAATGGGCAGAAAAGCAGTTCAAGCGGTGGAAGAAGGAGAGCTACAGATAATTCCTcacttttacacaaaaatgtggAAGAGCTGGCTGTCCAACATCGgCGATTGGTGTATTTCCAGACAGCTTTGGTGGGGTCACCAGATACCGGCCTATCGAGTGACCGTGGACAACTCAAAGGACACAGAGGAGCAGGAGCAGTGGGTTTGGGGCAGAAGTGCTGCAGAGGCCCGACAGCGTGCCGCTGTGAAGTTTGGGGTCAATCCTGACGCCATCACACTCACACaggACCCAGATGTGCTTGATACCTGGTTCTCTTCTGGTCTCTTCCCGTTCGCGATGCTCGGCTGGCCTCAGCAGACAGAAGACTTGAGACAGTTCTACCCCAATTCCATTCTGGAAACAGGAAGTGACCTCATCTTCTTTTGGGTGGCCAGGATGGTGATGCTAGGCAGAGAGTTGACGGGCCAGCTGCCCTTTAAACAGGTGCTCTTTCACTCTCTGGTGAGAGATAAATATGGGCGGAAGATGAGTAAATCCTTAGGAAACGTCATTGATCCTCTTGATGTCATCTCAGGGGTTTCTTTTGAGAGACTTCAAGAGAAAGTCAAAGAAGGAAACTTGGATCCGAGGGAAAGCGTTGTTGCCATGGAAGCACAGAAGAAAGATTTCCCCAAAGGGATTCCTGAGTGCGGGACGGATGCTTTGAGGTTTGCACTCTGCTCTTATAAAGCCCAGGGAGAAGATATCAGCCTGTCTGTGTCTCATGTGCTGGGCTGTAGACATTTCTGTAATAAGATGTGGCAGACAGTGCGCTTCACCCTCGCCATGCTGCATGATGCAAGTTTACCGACACCATTAGCAGAGACCCATCCTCTATCCAGCATGGACAAGTGGATCTGTTCACGTCTGTACAGCACCGTGCAGCAGTGTGAGAGGGGTTTGGAGAACTACGAGCTCCACATGGTCACATCGGCACTGCACTCTTTCTGGCTGCACAGTCTGTGTGATGTCTACCTGGAAAGCATCAAGCCGCTGTTGAAAGGTGAAGGCTCTGGTTGTGAGGAACAGAGAGCTGGAGAGAGGCAGGCGGCCATGTCTGTGTTGTATCACGCCGTGTCCGTCTCTCTCACGCTCCTCTCACCCTTCATGCCGTTCCTCACGGAGGAGCTGTGGCAGAGACTCCTGCCTTACGCTAACTCTGACGGGACGCCCCGCAGCCTGTGTGTGCAGCCCTACCCAAAGACATCACAGCTGGAGCACTGGTGTTTTCCTAAGGAGGAGGCTGACTTCTCTTTGGTTCAGGAAGTGGTCAGAGTGGCGAGGTTACTGAGGGCCCAGTGCCAGCTGACGAAGGAGAGACCCGAGTTGTGGGCGGTGTGTGCACCGGACCAGGCCGAGACGCTTCTGCGCTTCAGATCAGCGATCTGCACACTGGGCCGGATCTCAGCGTTTCATCTGCACTGTCCAGAGGCGGGTTTGAGCGACTCTCCTGCTCTGCCCAAGGCCAGGGCTGTAGGGACGGTGGATCACTCCATCTGCTTATATCTCAGCATTCAGAATGCTATTAATGCTGACAAACAGGGAGCTCTCCTCTCTCAGCGCAGAGAGAAGCTGGCCTCCAAACTAAAACAAGCCCTCGCTCACACCCAGATGCCCAACTATGCAGAAGAAGTACCTCATAGAGTCAGACAGAAGACAGAGAAAAAGattgcagCCATGGAGCTGGAGCTGAAGAACACCGAGGACCAACTTTTGGCTTTGGAAGACACGAGGAAAGAAGTCTAATggacaaaatattacattcaatCAACAACCAGCGAAAAAGAATACTTTGTACGGAAGCCTTGCAATGgacaatgaaaaaaagcaaaaaagctaGTGTATATTAATAAAGTTGGTTTGGATGTAATACATgcacaataaattatttacaaaagaa
>XM_043217381.1
TATCGTTTAACACGTAACATTTTTTCTTGCTTAAAATATTAGCTTCAGTGTGAAACACTCCAGATTTCGGGACATGTGGATGGCTGTGCATGTGGCATCACCCAGAGTCTGGAGCAGGGATCTTCAGAAGGCCTGGAGCACATGGGGATGCAGACTCTGCTCTCAAAGCTCATCTAGCACGCAGTCTTCACAGAATCCCAGGACACAAGCGGAGAAAGCCAAACGCAGACAAGCACGGGAGAAGGCCATACTCAGTGGTGATGCCAGTGGTCCTGGACTAATTTGGTcagataaagagaaaataacGTACACTGCTGCCCTTGTTCCTGGAGAAAAGAAAGACACCTCTCTGCCCTTTCCACAATCCTACAGCCCTGAATATGTGGAGTTTGGCTGGTATCAGTGGTGGGAGAAACAGGGATTCTTCAGGCCTGAGCAGCATAGTAAACAGCCCCATGCTGTTGATAAATATTTCTCCTTATGTATTCCACCGCCGGACGTGACCGGCACTTTACATCTCGGGCACGCGCTGACAGTGGCTATAGAAGATGCTTTGGCTCGCTGGCGACGGATGCAGGGCTACAAGGTCCTCTGGGTTCCCGGCTGTGACCATGCTGGGATCGCAACACAGTCAGTGGTTGAGAGGAAGCTGATGAGGGAGCAGGGGAAGTGCAGACGGGACTACAGTAGAGAGGAGTTCCTCAACCAGGTCTACAGATGGAAAGATGAaaaggGGGATGAAATTTATCATCAGCTGAGAAAACTTGGTTCATCTCTTGACTGGAACAGAGCATGTTTTACAATGGATCCGGGTTTCAGCAGTGCTGTGACGGAGGCCTTTGTCAGGCTGTGTGACTCTGGGCTCATCTATCGCTCTGAAGGTCTGGTCAACTGGAGCTGTGCTTTAGAGTCGGCCATCTCAGACATCGAGGTGGACTCTATGGATCTCTCGGGCAGGACTCTTCTGTCCGTTCCCGGTTATCAGCAGAAAGTGGAGTTTGGGATCATGCTTACATTTGCTTATCCACTGGAGGGACAGGgagGAGAGGTTGCGGTTTCAACCACACGTCCAGAGACGATGCTGGGAGACGTGGCTATTGCTGTTCATCCTGATGACCCTCGATATAAAGATCTTCATGGCAAACACTGCAGGCATCCATTCACAGAGCGCTTATTACCCATCGTCACTGACTCCATAGTGGATATGACTTTTGGCACAgGTGCTGTTAAAGTGACACCAGCTCATGACCACACTGACTTCCTGCTGTCTCAGAGACACTCACTCCCTCGCCTCACTGTGATTGGAGGAGACGGGGCTATGACCTCAGACTGCGGCCAATGGCTAGAGGGTGTTAAGCGATTTGATGCCAGGGAACGTGTAATTACTGCTCTGATGGAGAGGAAGCTGTTCAGAGGAAAGAAGGATCATCCCATGTCATTACCCATCTGCAGTCGTTCTGGAGATGTCATTGAACCGTTGCTGAAGAAACAGTGGTTCGTGCGCTGTCAGGAAATGGGCAGAAAAGCAGTTCAAGCGGTGGAAGAAGGAGAGCTACAGATAATTCCTcacttttacacaaaaatgtggAAGAGCTGGCTGTCCAACATCGgCGATTGGTGTATTTCCAGACAGCTTTGGTGGGGTCACCAGATACCGGCCTATCGAGTGACCGTGGACAACTCAAAGGACACAGAGGAGCAGGAGCAGTGGGTTTGGGGCAGAAGTGCTGCAGAGGCCCGACAGCGTGCCGCTGTGAAGTTTGGGGTCAATCCTGACGCCATCACACTCACACaggACCCAGATGTGCTTGATACCTGGTTCTCTTCTGGTCTCTTCCCGTTCGCGATGCTCGGCTGGCCTCAGCAGACAGAAGACTTGAGACAGTTCTACCCCAATTCCATTCTGGAAACAGGAAGTGACCTCATCTTCTTTTGGGTGGCCAGGATGGTGATGCTAGGCAGAGAGTTGACGGGCCAGCTGCCCTTTAAACAGGTGCTCTTTCACTCTCTGGTGAGAGATAAATATGGGCGGAAGATGAGTAAATCCTTAGGAAACGTCATTGATCCTCTTGATGTCATCTCAGGGGTTTCTTTTGAGAGACTTCAAGAGAAAGTCAAAGAAGGAAACTTGGATCCGAGGGAAAGCGTTGTTGCCATGGAAGCACAGAAGAAAGATTTCCCCAAAGGGATTCCTGAGTGCGGGACGGATGCTTTGAGGTTTGCACTCTGCTCTTATAAAGCCCAGGGAGAAGATATCAGCCTGTCTGTGTCTCATGTGCTGGGCTGTAGACATTTCTGTAATAAGATGTGGCAGACAGTGCGCTTCACCCTCGCCATGCTGCATGATGCAAGTTTACCGACACCATTAGCAGAGACCCATCCTCTATCCAGCATGGACAAGTGGATCTGTTCACGTCTGTACAGCACCGTGCAGCAGTGTGAGAGGGGTTTGGAGAACTACGAGCTCCACATGGTCACATCGGCACTGCACTCTTTCTGGCTGCACAGTCTGTGTGATGTCTACCTGGAAAGCATCAAGCCGCTGTTGAAAGGTGAAGGCTCTGGTTGTGAGGAACAGAGAGCTGGAGAGAGGCAGGCGGCCATGTCTGTGTTGTATCACGCCGTGTCCGTCTCTCTCACGCTCCTCTCACCCTTCATGCCGTTCCTCACGGAGGAGCTGTGGCAGAGACTCCTGCCTTACGCTAACTCTGACGGGACGCCCCGCAGCCTGTGTGTGCAGCCCTACCCAAAGACATCACAGCTGGAGCACTGGTGTTTTCCTAAGGAGGAGGCTGACTTCTCTTTGGTTCAGGAAGTGGTCAGAGTGGCGAGGTTACTGAGGGCCCAGTGCCAGCTGACGAAGGAGAGACCCGAGTTGTGGGCGGTGTGTGCACCGGACCAGGCCGAGACGCTTCTGCGCTTCAGATCAGCGATCTGCACACTGGGCCGGATCTCAGCGTTTCATCTGCACTGTCCAGAGGCGGGTTTGAGCGACTCTCCTGCTCTGCCCAAGGCCAGGGCTGTAGGGACGGTGGATCACTCCATCTGCTTATATCTCAGCATTCAGAATGCTATTAATGCTGACAAACAGGGAGCTCTCCTCTCTCAGCGCAGAGAGAAGCTGGCCTCCAAACTAAAACAAGCCCTCGCTCACACCCAGATGCCCAACTATGCAGAAGAAGTACCTCATAGAGTCAGACAGAAGACAGAGAAAAAGattgcagCCATGGAGCTGGAGCTGAAGAACACCGAGGACCAACTTTTGGCTTTGGAAGACACGAGGAAAGAAGTCTAATggacaaaatattacattcaatCAACAACCAGCGAAAAAGAATACTTTGTACGGAAGCCTTGCAATGgacaatgaaaaaaagcaaaaaagctaGTGTATATTAATAAAGTTGGTTTGGATGTAATACATgcacaataaattatttacaaaagaa

Function

symbol description
vars2 Predicted to enable valine-tRNA ligase activity. Predicted to be involved in valyl-tRNA aminoacylation. Predicted to act upstream of or within tRNA aminoacylation for protein translation. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 20. Orthologous to human VARS2 (valyl-tRNA synthetase 2, mitochondrial).

NR:

description
PREDICTED: valine--tRNA ligase, mitochondrial isoform X1

GO:

id name namespace
GO:0006438 valyl-tRNA aminoacylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004832 valine-tRNA ligase activity molecular_function
GO:0002161 aminoacyl-tRNA editing activity molecular_function

KEGG:

id description
K01873 VARS, valS; valyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217376.1 True 3782 mRNA 0.50 30 6672539 6696368
XM_043217377.1 False 3777 mRNA 0.50 30 6672539 6696366
XM_043217378.1 False 3557 mRNA 0.51 30 6672539 6691993
XM_043217379.1 False 3653 mRNA 0.50 30 6672539 6691800
XM_043217381.1 False 3449 mRNA 0.51 30 6672539 6691543

Neighbor

gene id symbol gene type direction distance location
mgat1b LOC107694344,LOC107754829,LOC107677460,LOC107711329 coding downstream 2153 6660812 ~ 6670386 (-)
gtf2h4 gtf2h4,LOC107694324,LOC107584301,LOC107595596,LOC107677462 coding downstream 24297 6640009 ~ 6648242 (-)
gabbr1b gabbr1b,gabbr1,LOC107677456,LOC107584305,LOC107595614 coding downstream 47485 6519866 ~ 6625054 (-)
sacm1la sacm1la,sacm1l,LOC107694349,LOC107677458,LOC107584306,LOC107711326,LOC107754789,LOC108273174 coding downstream 164109 6494491 ~ 6508430 (-)
LOC122323303 LOC107584307,LOC107694350,LOC107711327,LOC107595591 coding downstream 178343 6485917 ~ 6494196 (-)
c19h6orf47 LOC107711334,LOC107677470,LOC107584299,LOC107595602,LOC107754833,LOC107694340 coding upstream 534 6696902 ~ 6702200 (-)
si:ch211-152p11.4 LOC107754837,LOC107694339,LOC107584295,LOC107677469,LOC107711337,LOC107595601 coding upstream 20371 6716739 ~ 6725694 (-)
LOC122323845 LOC107584339 coding upstream 65707 6762075 ~ 6765872 (-)
adcy2b adcy2b,adcy2,LOC107694336,LOC107691497,LOC107595616,LOC107711297 coding upstream 73503 6769871 ~ 6821321 (-)
tent4a papd7,LOC107694334,LOC107691498 coding upstream 138518 6834886 ~ 6849688 (-)
G131114 NA non-coding downstream 232457 6438205 ~ 6440082 (-)
G130999 NA non-coding downstream 317064 6354956 ~ 6355475 (-)
G130982 NA non-coding downstream 379273 6248351 ~ 6293266 (-)
G130978 NA non-coding downstream 436262 6234044 ~ 6236277 (-)
G130973 NA non-coding downstream 474178 6198125 ~ 6198361 (-)
LOC122323439 NA non-coding upstream 6115 6702483 ~ 6708065 (-)
LOC122324260 NA non-coding upstream 6955 6703323 ~ 6703389 (-)
LOC122324261 NA non-coding upstream 7503 6703871 ~ 6703937 (-)
G131165 NA non-coding upstream 58046 6754414 ~ 6755435 (-)
G131166 NA non-coding upstream 63806 6760174 ~ 6760448 (-)
polr1h znrd1,LOC107584303,LOC107754832,LOC107677479,LOC107694346,LOC107595594 other downstream 23150 6648390 ~ 6649389 (-)
sh3bp5lb sh3bp5lb,LOC107711328,LOC107677461,LOC107694325,LOC107754828,LOC107584304,LOC108435520 other downstream 33319 6627598 ~ 6639220 (-)
G131006 LOC107754818,LOC107731580 other downstream 309367 6362347 ~ 6363172 (-)
LOC122324254 NA other downstream 1266903 5404516 ~ 5405636 (-)
G130763 NA other downstream 1420350 5245353 ~ 5252189 (-)
srd5a1 srd5a1,LOC107691541,LOC107711310,LOC107595623,LOC107694335 other upstream 154001 6850369 ~ 6858660 (-)
LOC122323893 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other upstream 660253 7356621 ~ 7360143 (-)
LOC122324169 si:dkeyp-46h3.1,LOC107694323,LOC107584363,LOC107691540,LOC107754838 other upstream 698812 7395180 ~ 7397946 (-)
LOC122323248 LOC107687071 other upstream 749390 7445758 ~ 7451916 (-)
G131373 NA other upstream 905765 7602133 ~ 7605143 (-)

Expression


Co-expression Network