mindy1 (fam63a,LOC107559718,LOC107669987,LOC107693308,LOC107589430,LOC106569905)


Basic Information

Item Value
gene id mindy1
gene name fam63a,LOC107559718,LOC107669987,LOC107693308,LOC107589430,LOC106569905
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 18394006 ~ 18403746 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217391.1
TACAAACACAGGCACCGGAAGTGAGACAGGCAAAAAACAAGATTACGGAAAGAGCGGCGAGAAAGAGGCTGACGTGCGCTGTGTCAGCCGCACGGATAGACGGCGAAACCTGTGGATTTCAGCCAGGCGCTTCGCTGGACTGTTGCGTTTTGCAGGGTGCCTTTCAGGGCCGAAGAAGGACGCTTTTGAAGATCTGCAGGAAGGGCGCTGTGGTAAGTTTCCGCTGCTGTTAATGCAAGAGTTTGTGAAATTCGCAACATGAGAAGCTTTCTTCGCCTCCAGAGCGTCGCCCTTCAGTGATCAGAAAGCCTCCCTGTGACTCAGCTGTTCCCAGAATCGGGGCAATTCAAACACCACACGGTTAGGCGGAGGCGCGCCGGAAAAAACTGCCACTTTAACAGTTTCGCCCCTTCGCATTCAAGCGATGGATGTGGCGTGAAAGCAAGAAAGGACTACGTTTTCAACTTGAGAATGTTTGGCTTTTTTGGTGTAAGCCGCTGCTTTTAAAAGACTGGAAACGTCGGTCTGCGCCGTATTGCTAAAACTCAGTAATATGAAGTGAGCAAAAACTATTTTGGGGGAAAAGCGAACAGCCACGGccagatttttaatttaatttaattttagcagCAACTGAAGATTTTAAAAACCGCATTCCCGTTCAATCGTCTCCGTTAATTCCAAGCACACGATCCTGCCCGTCAGGTCATGGCAGAGTCTTGCCCAGACGCCGTCGACGGTGAGATTATAGGCGCTTCTGAGGGACGGCCGTTGAAAAATGAGGACTTCGATGCCGCTAGACCTCAGGACAAGCAAATCGGCCGGAAAGAGGGTGTCGCCAACATTGAGCAATCCTCTGGGAGTATTTCTCACCTTGTGAAAGATGAGCTAACGGCATGCAAAGAACCTCCTACAAGCGCAGCGTCTCTTGATGATGCTCGTGCGGCCCGGTCGGTGACCTCTAAAAGCCAAGACAAAACCGATGAAGCTGAGATCCTCAGCCAGTCCTGCACACCCAGCCAATCGGAGGTGACGCCCACTTTCTCTGTGGCCAGCCTGGAGTTCTCCGAGGAGGCTAACGGGATCCCTCCTGATGGAGCGTTGGTTTCGTCCAAATCCGCTCAGGATGGCAACCAAGTGCCCCCTCAGGAGAGCGGAGGGGCCTGCGCGGGGGCTGCGAGGACATCAGAGCCTAGCATGCCGGCGTATTACTTTGTCAAGTGGATTACCTGGAAAGAGAAGAAGACGGCTGTTATCACGCAGAGCGAGAACGGACCCTGCCCTCTGATCGCCATCATGAACATCCTGTTGCTGCGGTGGAAGGTGAAGTTGCCGGCGCAGACAGAAGTGGTCACCACTGAAGAGCTGATGTCTCACCTTGGTGAATGTGTGCTGAACATCAAACCGCCGGAGAAAGCAGAAGGCATGGAGCTCAATTTCCAGCAGAACATGAGCGACGCGATGGCCGTGCTGCCAAAGCTGTCCACAGGCCTCGACGTTAATGTGCGTTTCACAGGTGTGTCCGACTTTGAGTACACGCCTGAGTGCATCGTCTTCGACCTGCTCGACGTTCCTCTCTACCACGGCTGGCTCGTCGACCCGCAGAGTCCCGAGGTGGTGTCTGCAGTGGGCAAACTCAGCTACAACCAACTGGTGGAGAAGATCATAGATTTCAAGCACTCGACAGACAGCAGTCAAGTCGGCGAAGGTTTGATAGCAGAGCAGTTTTTGGAGTCCACAGCAACCCAGCTGTCGTATCACGGCCTGTGTGAGCTCAACACGACGGCCAAGGAGGGAGAACTGTCTGTATTTTTCAGGAACAACCACTTCAGCACCATGATAAAGCACAAGGGTCACCTTTACCTGCTGGTCACGGATCAGGGCTTCCTGCAGGAGGAGAGCGTGGTCTGGGAGAGCCTCCATAATGTGGAGGGGGATGGGAATTTCTGTGACTCAGACTTCAGATTGTGTCACCCTTCCCAGAAACCCACAGCGGCCAGCCAGCCCTCCGCACAACAGCAGCAGATGCAGATCGACCAGGACTATCTGGTGGCGATGtccctgcagcagcagcagggtGAAGCTCCTGGACCCTTGAGTGATCTTGAGCTGGCCAGACAGCTGCAGCAGGAGGAGTACCAGCAGCCTCAAACACAGCAGCACCAGCCCTCAGCAGGACAGCAGATGAGAGGTCAGTCCTCATCTCAGCACGGAGGACAGAGACGCCGGGAAAAGAAGGATGACTCGGATTGCTGTATTCTTTAGGTCAGAGTACACTCGCCACCATAACCAGACTCTCAAAGCCAGTTGGGCTTCGGTTGAGAGTCTTCTGTACCACTACTGAACCATGGGACTTCACTCTTTGTCGTCCCAACGCCAAGCCTGCCTTTACAGTACAGTTGACCCCCTCGTTCCCGCCTTTCCTCGATCCTCATGGTTTGAACTGTTTCTCATTGTTGTCTACTGGACCAAATTAAGGTAGCAATTGTTCCTAAGCACTAATGAGCGTCGTTTGAGTGCTACTGTGGAGCTCCTAACTATGCCATTAAAGATTGAAGACTGTAATGGTAAATAATCAGGTATTGTAATAAGAATTTAATATTACACTGAAATGCTACTGTCTCAAGTTGATCTGTACAAAGTTACTTGTCATCTGCTTTTCATCCAAAGTGATGTACAGTACACTAAGTACACAGGGCTCCGTGGAGCTCCCTGGATCTTGTAAGCTGAGCTAATAAAAGCCACCTCTGTTAACAGGAAA
>XM_043217392.1
TACAAACACAGGCACCGGAAGTGAGACAGGCAAAAAACAAGATTACGGAAAGAGCGGCGAGAAAGAGGCTGACGTGCGCTGTGTCAGCCGCACGGATAGACGGCGAAACCTGTGGATTTCAGCCAGGCGCTTCGCTGGACTGTTGCGTTTTGCAGGGTGCCTTTCAGGGCCGAAGAAGGACGCTTTTGAAGATCTGCAGGAAGGGCGCTGTGAGTTTGTGAAATTCGCAACATGAGAAGCTTTCTTCGCCTCCAGAGCGTCGCCCTTCAGTGATCAGAAAGCCTCCCTGTGACTCAGCTGTTCCCAGAATCGGGGCAATTCAAACACCACACGGTTAGGCGGAGGCGCGCCGGAAAAAACTGCCACTTTAACAGTTTCGCCCCTTCGCATTCAAGCGATGGATGTGGCGTGAAAGCAAGAAAGGACTACGTTTTCAACTTGAGAATGTTTGGCTTTTTTGGTGTAAGCCGCTGCTTTTAAAAGACTGGAAACGTCGGTCTGCGCCGTATTGCTAAAACTCAGTAATATGAAGTGAGCAAAAACTATTTTGGGGGAAAAGCGAACAGCCACGGccagatttttaatttaatttaattttagcagCAACTGAAGATTTTAAAAACCGCATTCCCGTTCAATCGTCTCCGTTAATTCCAAGCACACGATCCTGCCCGTCAGGTCATGGCAGAGTCTTGCCCAGACGCCGTCGACGGTGAGATTATAGGCGCTTCTGAGGGACGGCCGTTGAAAAATGAGGACTTCGATGCCGCTAGACCTCAGGACAAGCAAATCGGCCGGAAAGAGGGTGTCGCCAACATTGAGCAATCCTCTGGGAGTATTTCTCACCTTGTGAAAGATGAGCTAACGGCATGCAAAGAACCTCCTACAAGCGCAGCGTCTCTTGATGATGCTCGTGCGGCCCGGTCGGTGACCTCTAAAAGCCAAGACAAAACCGATGAAGCTGAGATCCTCAGCCAGTCCTGCACACCCAGCCAATCGGAGGTGACGCCCACTTTCTCTGTGGCCAGCCTGGAGTTCTCCGAGGAGGCTAACGGGATCCCTCCTGATGGAGCGTTGGTTTCGTCCAAATCCGCTCAGGATGGCAACCAAGTGCCCCCTCAGGAGAGCGGAGGGGCCTGCGCGGGGGCTGCGAGGACATCAGAGCCTAGCATGCCGGCGTATTACTTTGTCAAGTGGATTACCTGGAAAGAGAAGAAGACGGCTGTTATCACGCAGAGCGAGAACGGACCCTGCCCTCTGATCGCCATCATGAACATCCTGTTGCTGCGGTGGAAGGTGAAGTTGCCGGCGCAGACAGAAGTGGTCACCACTGAAGAGCTGATGTCTCACCTTGGTGAATGTGTGCTGAACATCAAACCGCCGGAGAAAGCAGAAGGCATGGAGCTCAATTTCCAGCAGAACATGAGCGACGCGATGGCCGTGCTGCCAAAGCTGTCCACAGGCCTCGACGTTAATGTGCGTTTCACAGGTGTGTCCGACTTTGAGTACACGCCTGAGTGCATCGTCTTCGACCTGCTCGACGTTCCTCTCTACCACGGCTGGCTCGTCGACCCGCAGAGTCCCGAGGTGGTGTCTGCAGTGGGCAAACTCAGCTACAACCAACTGGTGGAGAAGATCATAGATTTCAAGCACTCGACAGACAGCAGTCAAGTCGGCGAAGGTTTGATAGCAGAGCAGTTTTTGGAGTCCACAGCAACCCAGCTGTCGTATCACGGCCTGTGTGAGCTCAACACGACGGCCAAGGAGGGAGAACTGTCTGTATTTTTCAGGAACAACCACTTCAGCACCATGATAAAGCACAAGGGTCACCTTTACCTGCTGGTCACGGATCAGGGCTTCCTGCAGGAGGAGAGCGTGGTCTGGGAGAGCCTCCATAATGTGGAGGGGGATGGGAATTTCTGTGACTCAGACTTCAGATTGTGTCACCCTTCCCAGAAACCCACAGCGGCCAGCCAGCCCTCCGCACAACAGCAGCAGATGCAGATCGACCAGGACTATCTGGTGGCGATGtccctgcagcagcagcagggtGAAGCTCCTGGACCCTTGAGTGATCTTGAGCTGGCCAGACAGCTGCAGCAGGAGGAGTACCAGCAGCCTCAAACACAGCAGCACCAGCCCTCAGCAGGACAGCAGATGAGAGGTCAGTCCTCATCTCAGCACGGAGGACAGAGACGCCGGGAAAAGAAGGATGACTCGGATTGCTGTATTCTTTAGGTCAGAGTACACTCGCCACCATAACCAGACTCTCAAAGCCAGTTGGGCTTCGGTTGAGAGTCTTCTGTACCACTACTGAACCATGGGACTTCACTCTTTGTCGTCCCAACGCCAAGCCTGCCTTTACAGTACAGTTGACCCCCTCGTTCCCGCCTTTCCTCGATCCTCATGGTTTGAACTGTTTCTCATTGTTGTCTACTGGACCAAATTAAGGTAGCAATTGTTCCTAAGCACTAATGAGCGTCGTTTGAGTGCTACTGTGGAGCTCCTAACTATGCCATTAAAGATTGAAGACTGTAATGGTAAATAATCAGGTATTGTAATAAGAATTTAATATTACACTGAAATGCTACTGTCTCAAGTTGATCTGTACAAAGTTACTTGTCATCTGCTTTTCATCCAAAGTGATGTACAGTACACTAAGTACACAGGGCTCCGTGGAGCTCCCTGGATCTTGTAAGCTGAGCTAATAAAAGCCACCTCTGTTAACAGGAAA
>XM_043217393.1
ACGTCACTGTTTACAAACACAGGCACCGGAAGTGAGACAGGCAAAAAACAAGATTACGGAAAGAGCGGCGAGAAAGAGGCTGACGTGCGCTGTGTCAGCCGCACGGATAGACGGCGAAACCTGTGGATTTCAGCCAGGCGCTTCGCTGGACTGTTGCGTTTTGCAGGGTGCCTTTCAGGGCCGAAGAAGGACGCTTTTGAAGATCTGCAGGAAGGGCGCTGTGGTAAGTTTCCGCTGCTGTTAATGCAAGAGTTTGTGAAATTCGCAACATGAGAAGCTTTCTTCGCCTCCAGAGCGTCGCCCTTCAGTGATCAGAAAGCCTCCCTGTGACTCAGCTGTTCCCAGAATCGGGGCAATTCAAACACCACACGGTTAGGCGGAGGCGCGCCGGAAAAAACTGCCACTTTAACAGTTTCGCCCCTTCGCATTCAAGCGATGGATGTGGCGTGAAAGCAAGAAAGGACTACGTTTTCAACTTGAGAATGTTTGGCTTTTTTGGTGTAAGCCGCTGCTTTTAAAAGACTGGAAACGTCGGTCTGCGCCGTATTGCTAAAACTCAGTAATATGAAGTGAGCAAAAACTATTTTGGGGGAAAAGCGAACAGCCACGGccagatttttaatttaatttaattttagcagCAACTGAAGATTTTAAAAACCGCATTCCCGTTCAATCGTCTCCGTTAATTCCAAGCACACGATCCTGCCCGTCAGGTCATGGCAGAGTCTTGCCCAGACGCCGTCGACGGTGAGATTATAGGCGCTTCTGAGGGACGGCCGTTGAAAAATGAGGACTTCGATGCCGCTAGACCTCAGGACAAGCAAATCGGCCGGAAAGAGGGTGTCGCCAACATTGAGCAATCCTCTGGGAGTATTTCTCACCTTGTGAAAGATGAGCTAACGGCATGCAAAGAACCTCCTACAAGCGCAGCGTCTCTTGATGATGCTCGTGCGGCCCGGTCGGTGACCTCTAAAAGCCAAGACAAAACCGATGAAGCTGAGATCCTCAGCCAGTCCTGCACACCCAGCCAATCGGAGGTGACGCCCACTTTCTCTGTGGCCAGCCTGGAGTTCTCCGAGGAGGCTAACGGGATCCCTCCTGATGGAGCGTTGGTTTCGTCCAAATCCGCTCAGGATGGCAACCAAGTGCCCCCTCAGGAGAGCGGAGGGGCCTGCGCGGGGGCTGCGAGGACATCAGAGCCTAGCATGCCGGCGTATTACTTTGTCAAGTGGATTACCTGGAAAGAGAAGAAGACGGCTGTTATCACGCAGAGCGAGAACGGACCCTGCCCTCTGATCGCCATCATGAACATCCTGTTGCTGCGGTGGAAGGTGAAGTTGCCGGCGCAGACAGAAGTGGTCACCACTGAAGAGCTGATGTCTCACCTTGGTGAATGTGTGCTGAACATCAAACCGCCGGAGAAAGCAGAAGGCATGGAGCTCAATTTCCAGCAGAACATGAGCGACGCGATGGCCGTGCTGCCAAAGCTGTCCACAGGCCTCGACGTTAATGTGCGTTTCACAGGTGTGTCCGACTTTGAGTACACGCCTGAGTGCATCGTCTTCGACCTGCTCGACGTTCCTCTCTACCACGGCTGGCTCGTCGACCCGCAGAGTCCCGAGGTGGTGTCTGCAGTGGGCAAACTCAGCTACAACCAACTGGTGGAGAAGATCATAGATTTCAAGCACTCGACAGACAGCAGTCAAGTCGGCGAAGGTTTGATAGCAGAGCAGTTTTTGGAGTCCACAGCAACCCAGCTGTCGTATCACGGCCTGTGTGAGCTCAACACGACGGCCAAGGAGGGAGAACTGTCTGTATTTTTCAGGAACAACCACTTCAGCACCATGATAAAGCACAAGGGTCACCTTTACCTGCTGGTCACGGATCAGGGCTTCCTGCAGGAGGAGAGCGTGGTCTGGGAGAGCCTCCATAATGTGGAGGGGGATGGGAATTTCTGTGACTCAGACTTCAGATTGTGTCACCCTTCCCAGAAACCCACAGCGGCCAGCCAGCCCTCCGCACAACAGCAGCAGATGCAGATCGACCAGGACTATCTGGTGGCGATGtccctgcagcagcagcagggtGAAGCTCCTGGACCCTTGAGTGATCTTGAGCTGGCCAGACAGCTGCAGCAGGAGGAGTACCAGCAGCCTCAAACACAGCAGCACCAGCCCTCAGCAGGACAGATGAGAGGTCAGTCCTCATCTCAGCACGGAGGACAGAGACGCCGGGAAAAGAAGGATGACTCGGATTGCTGTATTCTTTAGGTCAGAGTACACTCGCCACCATAACCAGACTCTCAAAGCCAGTTGGGCTTCGGTTGAGAGTCTTCTGTACCACTACTGAACCATGGGACTTCACTCTTTGTCGTCCCAACGCCAAGCCTGCCTTTACAGTACAGTTGACCCCCTCGTTCCCGCCTTTCCTCGATCCTCATGGTTTGAACTGTTTCTCATTGTTGTCTACTGGACCAAATTAAGGTAGCAATTGTTCCTAAGCACTAATGAGCGTCGTTTGAGTGCTACTGTGGAGCTCCTAACTATGCCATTAAAGATTGAAGACTGTAATGGTAAATAATCAGGTATTGTAATAAGAATTTAATATTACACTGAAATGCTACTGTCTCAAGTTGATCTGTACAAAGTTACTTGTCATCTGCTTTTCATCCAAAGTGATGTACAGTACACTAAGTACACAGGGCTCCGTGGAGCTCCCTGGATCTTGTAAGCTGAGCTAATAAAAGCCACCTCTGTTAACAGGAAA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase MINDY-1

GO: NA

KEGG:

id description
K01309 MINDY1_2; ubiquitin carboxyl-terminal hydrolase MINDY-1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217391.1 False 2761 mRNA 0.52 11 18394006 18403735
XM_043217392.1 False 2734 mRNA 0.52 11 18394006 18403735
XM_043217393.1 True 2769 mRNA 0.52 11 18394006 18403746

Neighbor

gene id symbol gene type direction distance location
mrpl24 mrpl24,LOC107669969,LOC107559719,LOC107693309,LOC107580210 coding downstream 10827 18381451 ~ 18383179 (-)
prcc LOC107753464,LOC107693312,LOC107589427,LOC107670020,LOC107716568,LOC107577543 coding downstream 13440 18376016 ~ 18380566 (-)
pbxip1a LOC107589426,LOC107729890,LOC107693313,LOC107716591 coding downstream 21755 18352984 ~ 18372251 (-)
s100a11 LOC107589424,LOC107729880,LOC107693277,LOC107669999,LOC107559722 coding downstream 41542 18350617 ~ 18352464 (-)
s100u s100u,LOC107716592,LOC107670009,LOC107578875 coding downstream 44982 18341358 ~ 18349024 (-)
sf3b4 sf3b4,LOC107669988,LOC107716574 coding upstream 10478 18414224 ~ 18416303 (-)
naxe apoa1bp,naxe,LOC107753479,LOC107693306,LOC107669985 coding upstream 16913 18420659 ~ 18423692 (-)
sqleb NA coding upstream 64232 18467978 ~ 18471674 (-)
recql4 recql4,LOC107589489,LOC106570431 coding upstream 78908 18482654 ~ 18493910 (-)
limd1b LOC107578185,LOC107669936,LOC107716566,LOC107753472,LOC107693300,LOC107731694 coding upstream 90354 18494100 ~ 18495558 (-)
G134332 NA non-coding downstream 90349 18290057 ~ 18303657 (-)
G134334 NA non-coding downstream 124946 18268305 ~ 18269060 (-)
G134319 NA non-coding downstream 375744 18017969 ~ 18018262 (-)
G134317 NA non-coding downstream 427467 17965575 ~ 17966539 (-)
G134309 trim46b,LOC107678799,LOC107599500,LOC108241966 non-coding downstream 446172 17938947 ~ 17947834 (-)
G134365 LOC107726654 non-coding upstream 13280 18417026 ~ 18417853 (-)
G134411 oxr1b non-coding upstream 53419 18457165 ~ 18460899 (-)
LOC122324145 NA non-coding upstream 119454 18523200 ~ 18532017 (-)
G134426 NA non-coding upstream 129427 18533173 ~ 18533500 (-)
G134428 NA non-coding upstream 168322 18572068 ~ 18586326 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other downstream 152393 18225609 ~ 18241613 (-)
si:dkey-266f7.5 NA other downstream 205977 18169523 ~ 18188029 (-)
G134318 NA other downstream 382607 18010882 ~ 18011399 (-)
s100a10a s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278 other downstream 458570 17929689 ~ 17935436 (-)
LOC122324164 LOC107589398,LOC107693356,LOC107724088,LOC107589397,LOC107599520,LOC107665487,LOC107724089 other downstream 777729 17613446 ~ 17616277 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other upstream 283603 18687349 ~ 18691249 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other upstream 472868 18876614 ~ 18933228 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other upstream 1139036 19542782 ~ 19652807 (-)
LOC122324012 NA other upstream 1267041 19670787 ~ 19688386 (-)
G134895 NA other upstream 1978274 20382020 ~ 20382727 (-)

Expression


Co-expression Network