LOC122323517 (ppce,LOC107654745,LOC107710331,LOC107602379,LOC108259106)


Basic Information

Item Value
gene id LOC122323517
gene name ppce,LOC107654745,LOC107710331,LOC107602379,LOC108259106
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15280429 ~ 15292601 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217396.1
gagacagagagccgTGTTTgatttcactttcacttttcaGAGCTGACTCACCGGGGCGTGAAACATAcggacaaaaacacaaaaacatacacagaattacagaaaaaacCCTATCAAAACACACTCAGCATGGCTTTTGTATACCCTGAAGCATGGAGGGATGACAGTAAGGTGGAGGATTATCATGGAGTAAAGATCTCAGATCCATACCACTGGCTGGAGGACCCTGACAGTGAGGAGACTAAGATGTTTGTTGAAGAGCAGAATAAGTTGACCATGCCATTCCTGGAACGGTGTGAGGTGAAAGAGCGCTTTCACCAGCGCCTCACGGAGCTCTACAACTACCCCAAATACAGCTGCCCTTACAAGAGAGGAAAGAGATACTTCTATTTCCATAACAAGGGATTGCAGAACCAGGATGTGCTCTATGTGCAGGACTCTTTAAACAGtcctgtgtctgtgttttttgaCCCAAACACTCTCTCAGAGGATGGAACTGTGGCTCTCAAAATGGGTCGCCTGTCAGAAGAATGCGAGTACTTTGCATATGGCCTGAGCAGCGCGGGCTCTGATTGGGTGACTGTACACTTCCTGAAGGCTGATGACCTCACCAAACTGCCAGACGTTCTGGAGAGGGTGAAGTTCAGTTGCTTGGCTTGGACCCATGATGCCAAAGGCATCTTCTACAACTGTTTCCCTCGACAGGATGGCAAAGCTGATGGCACCGAGACCACAACAAACCTAAACCAGAAGCTTTACTACCATGTTATTGGCACAAGCCAATCAGAAGATATACTGGTGGCAGAATTTCCTGATAACCCAAAATGGCACAGTAGCCTTACTGTCTCTGACGACGGCAGGTATGCAGTGTTGTCCATCACGGAGGGCTGTGAGCCAGTCAACCGTCTGTGGTACTGCGACCTGCAGCAGCTGCCCAACGGCATCACAGgCTTGCTGCCATGGGTGAAGCTGGTTGACACATTTGAAGCGCAGTACACATACATCACCAACGAGGGCACCATCTTCACGTTACGCACCAATCTGGATGCTCCTCGTTACTGCCTTATCACCATAGACCTGCAGAAACCAGAGCAGATACACTGGAAAACCCTCATCCCTCAACACGAGAAGGACGTTCTTGGCTTCGTCGAGTGTGTGAACCAGCGCTATCTGCTGGTGAACTATGTGCATGACGTGAAGGACATCTTACAGCTGTATGAGCTGCAGTCAGGGAAACTGATCAGAGACCTGCCGCTGGATGTGGGCACGGTAGTTGGCCTTAGCTGCAAGAAGAAGCACCCCGACTTCTTCTACAAGTTCACCTCGTTCACTACTCCAGGCATAATTTACCACTGTGACCTGAGTCAACCCGAGCCCGAGCCCACTATCTTCAGGCAAGTGGAAGTAAAGGGCATCAACCCGAGTGACTACCAGACAACTCAGGTGTTTTACCCCAGTAAGGATGGCACAAAGATCCCGATGTTCCTGGTACATGCACGTGGCATAGAAAGAGACGGCACTCATCCAGTCTTTCTCTATGGTTATGGAGGCTTTGAGAACTCAATTCAGCCATATTACAATACGGCATACCTGCTCTATATTAGACACCTGGGTGGGATCCTGGCTGTTGCTAAcatcagaggaggaggagagtaCGGACAAACCTGGCACAAGGCTGGCACTCTCGGGAACAAGCAGAACTGTTTTGATGACTTCCAGCATGCTGCCGAGTACCTGATCCAGGAAGGATACACCACGGCCGGCCGGATCGCCATCAACGGGGCTTCCAACGGAGGCCTGCTCGTGGcgGCATGTGTAAACCAACGGCCCGAGCTCTTCGGTTGTGCAGTAGCTGAAGTCGGGGTCATGGACATGCTCAAGTTCCACAAATTCACCATCGGTCACGCCTGGACCACTGACTACGGCTGTGCCGATGACCCTGAACAGTTTAAATGGCTCATCAAGTACTCTCCTCTCCACAACCTTCCTCAGGCCCCTCGAGATGGGACCCCTTACCCTGCGATGCTACTGCTGACGGCCGATCACGATGACCGCGTGGTTCCCCTGCACACTCTGAAGTACGTGGCCACTCTCCAGCACGGCGTGGGCCGCAGCCCCGGGCAAACCCGGCCGCTGATGGTCAGGGTGGACACGCGCAGCGGACATGGAGCCGGGAAACCCACCGCTAAAGCCATCCTGGAGGACACGCACATCTTCTCCTTCATAGCTCACACGCTGAACCTCAGCTGGAGGGAATAAGAGAGAGATGCAGTAAACAGAATTAGCGATTTCACGACAAGAGCACAAATTATCTAGTGATTTCTAAAGATATTTGGCTGCGCTTATGCAGGGACTGAGAGAGGAGAAGGGCATTTGGGGagtaagtaaatgttttatatttccaTGGAAGGTActaaaatggttttgtttttggagcaacttgatttttacttttgtttcagCACAGCAGTGATCATTAAAGGTggtttttacaataataaacaactgaTTCTCTGTAAA

Function

NR:

description
PREDICTED: prolyl endopeptidase-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0070008 serine-type exopeptidase activity molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01322 PREP; prolyl oligopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217396.1 True 2520 mRNA 0.50 15 15280429 15292601

Neighbor

gene id symbol gene type direction distance location
c19h1orf109 LOC107688373,LOC107754259,LOC107592951,LOC107654741,LOC107591985 coding downstream 321929 14956900 ~ 14958500 (-)
LOC122323565 clspn,LOC107706248,LOC107654737,LOC107754255 coding downstream 345360 14925718 ~ 14935069 (-)
LOC122323256 LOC107706246,LOC107654736,LOC107754261,LOC107688374,LOC107591981 coding downstream 356319 14921661 ~ 14924110 (-)
psmb2 psmb2,LOC107592948,LOC107688376,LOC107591978 coding downstream 365030 14907627 ~ 14915399 (-)
sdc2 LOC107654728,LOC107591973,LOC107706240,LOC107592944,LOC107688380,LOC107754266 coding downstream 449914 14806739 ~ 14830515 (-)
LOC122324119 NA coding upstream 68325 15360926 ~ 15362818 (-)
rpl14 rpl14,LOC107710319,LOC107688416,LOC107654689,LOC107706260 coding upstream 84036 15376637 ~ 15378662 (-)
trnap-agg_22 NA coding upstream 92594 15385195 ~ 15385266 (-)
trak1b LOC107591988,LOC107710336,LOC107654751,LOC107688362,LOC107706145 coding upstream 133600 15426201 ~ 15439451 (-)
LOC122324175 cfap44,LOC107706146,LOC107580614,LOC107688389 coding upstream 146754 15439355 ~ 15454526 (-)
G133190 LOC107654743,LOC107706254 non-coding downstream 3026 15190805 ~ 15277403 (-)
G133143 NA non-coding downstream 442476 14836460 ~ 14837953 (-)
G133144 NA non-coding downstream 444568 14835452 ~ 14835861 (-)
G133016 rbm24a,LOC107696536,LOC107592929,LOC107706227,LOC107754275,LOC107654717,LOC107591968 non-coding downstream 851607 14403518 ~ 14428822 (-)
LOC122324095 NA non-coding downstream 1007711 14268267 ~ 14272718 (-)
G133226 NA non-coding upstream 91246 15383847 ~ 15384115 (-)
G133313 NA non-coding upstream 121374 15413975 ~ 15424498 (-)
G133315 NA non-coding upstream 187731 15480332 ~ 15481202 (-)
G133361 NA non-coding upstream 332724 15625325 ~ 15626280 (-)
G133370 LOC107710351,LOC107688346 non-coding upstream 379581 15672182 ~ 15673003 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other downstream 388511 14887528 ~ 14891918 (-)
G133132 NA other downstream 496006 14784188 ~ 14784423 (-)
G132785 NA other downstream 1771976 13507664 ~ 13508453 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other downstream 1778059 13494830 ~ 13502370 (-)
G132733 NA other downstream 1994968 13284531 ~ 13285461 (-)
G133217 NA other upstream 73833 15366434 ~ 15369736 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other upstream 352261 15644862 ~ 15648579 (-)
G133373 LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391 other upstream 367318 15659919 ~ 15660720 (-)
evx1 evx1,LOC107688412,LOC107602371,LOC107710323,LOC107654696,LOC107748750,LOC107592093 other upstream 444346 15736947 ~ 15740329 (-)
npy LOC107592012,LOC107748754,LOC107656665,LOC107688404 other upstream 629622 15922223 ~ 15924285 (-)

Expression


Co-expression Network