nkiras1 (nkiras1,LOC107655880)


Basic Information

Item Value
gene id nkiras1
gene name nkiras1,LOC107655880
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 1987321 ~ 1990909 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217491.1
TTTTGCTTATCCCCAGACTAAATAATTTGATTCTCTTAGGCTCGGagggagaagaagaagacgCGAGGGACCGTCTCCCGGAAGTGACATTTGACAACACCTCTAGCACGCAGTGATGACACTAAAAAGTCTTATATTGACATTCCTCTGATTTATCAATGATCAGTATCGTTGATTAGATGTTTATCGTCTGACAATCCGCGTAAGCAGTGATTATGGGGAAGGGCTGTAAGGTGGTGGTTTGTGGGATGGCATCTGTGGGGAAAACAGCCATCCTGGAGCAGCTACTGTACGGCTCTCACACTGTAGGTGCAGAGACGAATGACACTCAGGAGGACATCTACGTGGCGTCTGTGGAGACGGACCGTGGTGTGAGGGAGCAGTTACGTCTCTACGACACTCGAGGCCTGCGAGAAGGGCTGGATTTACCCAAGCACTTCTTTTCAGTGGCTGACGGATTCGTGCTGGTCTACAGCGTCGACAGCCTGGAGTCCTTCAGAAAAGTCGAGCTCTTAAAGAAGGAGATAGACAAGTCCAGAGACAAAAAAGAGgtgATGGTGATGGTGCTGGGGAATAAGTGTGACCTGCGCGAGCGGAGGCAGGTGGATCAGGACGCGGCGCAGCAGTGGGCGCGAGGAGAGAAGCTCAAGCTCTGGGAGGTGAGCGTCACAGACCGAAGCTCTTTGATCGAGCCCTTCACCAGCCTCACCAGCCGCCTCACTCAGCCGCAGAGCAAGTCTGCCTTCCCTCTGCCCGGCCGCAAGAGCAAGGGCACCCCGTCCAGCGACATCTGAACACGTCCGTTCACACTCAGGATTGCTTTCTTTTCGTCATCGTGCTGCAGCGAATCTCCAAAACGAACAAGTCGTCCATGACCAAAAGATTTCATTCTCACTAACGCAGAGTTcttccagattttttttgtaactatgGTTCtcattgatttaataaaattgctgtattttacaatataaatgttatagaAATCTGTCTTTTTACATTATGGgtttccatttatttatgcaaatataacttatgttttataaaataatttattttgcgaCGGAACCCGAGAATCAGTAGCAGCACTCAAGATGATAGAATGGTACAGTAGAGAGAAAATGCACCGTTTATGTGTTTCTTCGGGCGCGAACTTCAGTCAAGAACAGGCAGAAGTGCTTTAAGATGCCGGTTAATAAAAAGACGGCGATGCTGTTATGTTAAAGCCATAtagtgcgtgtttgtgtgtatgataGCGTCGATTTATAATCTCCGATCAGCTGTTCCTTCCCTTTCTCTGAGCTATAACGGTGTAgcctgttgctttaaatgcctGAAAACATTATACGGATGCTACAGTAGAGGAAAACCCCAGCAGTTATCAATGGATATTTGTGAAATCCTCACCTTACGCAAAAGACGCACTGCGTTTACTTACCCTGTAATGACTTgtttaaccaaataaatgtttactgaCTTGA
>XM_043217492.1
TATTTTGCTTATCCCCAGACTAAATAATTTGATTCTCTTAGGCTCGGagggagaagaagaagacgCGAGGGACCGTCTCCCGGAAGTGACATTTGACAACACCTCTAGCACGCAGTGATGACACTAAAAAGTCTTATATTGACATTCCTCTGATTTATCAATGATCAGTATCGTTGATTAGATGTTTATCGTCTGACAATCCGCGTAAGGTGAGTTAGTATTTCTCCGTGTACTAGTAACAGTCACGAATGGATGCATGTCTGGTCAAGAAgattactatttttttctttaacaatcTTCACATAACAAACCAGAAACTGAGCATTCTGTGCAGATTATTCAGCAGTGATTATGGGGAAGGGCTGTAAGGTGGTGGTTTGTGGGATGGCATCTGTGGGGAAAACAGCCATCCTGGAGCAGCTACTGTACGGCTCTCACACTGTAGGTGCAGAGACGAATGACACTCAGGAGGACATCTACGTGGCGTCTGTGGAGACGGACCGTGGTGTGAGGGAGCAGTTACGTCTCTACGACACTCGAGGCCTGCGAGAAGGGCTGGATTTACCCAAGCACTTCTTTTCAGTGGCTGACGGATTCGTGCTGGTCTACAGCGTCGACAGCCTGGAGTCCTTCAGAAAAGTCGAGCTCTTAAAGAAGGAGATAGACAAGTCCAGAGACAAAAAAGAGgtgATGGTGATGGTGCTGGGGAATAAGTGTGACCTGCGCGAGCGGAGGCAGGTGGATCAGGACGCGGCGCAGCAGTGGGCGCGAGGAGAGAAGCTCAAGCTCTGGGAGGTGAGCGTCACAGACCGAAGCTCTTTGATCGAGCCCTTCACCAGCCTCACCAGCCGCCTCACTCAGCCGCAGAGCAAGTCTGCCTTCCCTCTGCCCGGCCGCAAGAGCAAGGGCACCCCGTCCAGCGACATCTGAACACGTCCGTTCACACTCAGGATTGCTTTCTTTTCGTCATCGTGCTGCAGCGAATCTCCAAAACGAACAAGTCGTCCATGACCAAAAGATTTCATTCTCACTAACGCAGAGTTcttccagattttttttgtaactatgGTTCtcattgatttaataaaattgctgtattttacaatataaatgttatagaAATCTGTCTTTTTACATTATGGgtttccatttatttatgcaaatataacttatgttttataaaataatttattttgcgaCGGAACCCGAGAATCAGTAGCAGCACTCAAGATGATAGAATGGTACAGTAGAGAGAAAATGCACCGTTTATGTGTTTCTTCGGGCGCGAACTTCAGTCAAGAACAGGCAGAAGTGCTTTAAGATGCCGGTTAATAAAAAGACGGCGATGCTGTTATGTTAAAGCCATAtagtgcgtgtttgtgtgtatgataGCGTCGATTTATAATCTCCGATCAGCTGTTCCTTCCCTTTCTCTGAGCTATAACGGTGTAgcctgttgctttaaatgcctGAAAACATTATACGGATGCTACAGTAGAGGAAAACCCCAGCAGTTATCAATGGATATTTGTGAAATCCTCACCTTACGCAAAAGACGCACTGCGTTTACTTACCCTGTAATGACTTgtttaaccaaataaatgtttactgaCTTGA
>XM_043217493.1
TATTTTGCTTATCCCCAGACTAAATAATTTGATTCTCTTAGGCTCGGagggagaagaagaagacgCGAGGGACCGTCTCCCGGAAGTGACATTTGACAACACCTCTAGCACGCAGTGATGACACTAAAAAGTCTTATATTGACATTCCTCTGATTTATCAATGATCAGTATCGTTGATTAGATGTTTATCGTCTGACAATCCGCGTAAGGTGAGTTAGTATTTCTCCGTGTACTAGTAACAGTCACGAATGGATGCATGTCTGGTCAAGAAgattactatttttttctttaacaatcTTCACATAACAAACCAGAAACTGAGCATTCTGTGCAGATTATTCAGTGATTATGGGGAAGGGCTGTAAGGTGGTGGTTTGTGGGATGGCATCTGTGGGGAAAACAGCCATCCTGGAGCAGCTACTGTACGGCTCTCACACTGTAGGTGCAGAGACGAATGACACTCAGGAGGACATCTACGTGGCGTCTGTGGAGACGGACCGTGGTGTGAGGGAGCAGTTACGTCTCTACGACACTCGAGGCCTGCGAGAAGGGCTGGATTTACCCAAGCACTTCTTTTCAGTGGCTGACGGATTCGTGCTGGTCTACAGCGTCGACAGCCTGGAGTCCTTCAGAAAAGTCGAGCTCTTAAAGAAGGAGATAGACAAGTCCAGAGACAAAAAAGAGgtgATGGTGATGGTGCTGGGGAATAAGTGTGACCTGCGCGAGCGGAGGCAGGTGGATCAGGACGCGGCGCAGCAGTGGGCGCGAGGAGAGAAGCTCAAGCTCTGGGAGGTGAGCGTCACAGACCGAAGCTCTTTGATCGAGCCCTTCACCAGCCTCACCAGCCGCCTCACTCAGCCGCAGAGCAAGTCTGCCTTCCCTCTGCCCGGCCGCAAGAGCAAGGGCACCCCGTCCAGCGACATCTGAACACGTCCGTTCACACTCAGGATTGCTTTCTTTTCGTCATCGTGCTGCAGCGAATCTCCAAAACGAACAAGTCGTCCATGACCAAAAGATTTCATTCTCACTAACGCAGAGTTcttccagattttttttgtaactatgGTTCtcattgatttaataaaattgctgtattttacaatataaatgttatagaAATCTGTCTTTTTACATTATGGgtttccatttatttatgcaaatataacttatgttttataaaataatttattttgcgaCGGAACCCGAGAATCAGTAGCAGCACTCAAGATGATAGAATGGTACAGTAGAGAGAAAATGCACCGTTTATGTGTTTCTTCGGGCGCGAACTTCAGTCAAGAACAGGCAGAAGTGCTTTAAGATGCCGGTTAATAAAAAGACGGCGATGCTGTTATGTTAAAGCCATAtagtgcgtgtttgtgtgtatgataGCGTCGATTTATAATCTCCGATCAGCTGTTCCTTCCCTTTCTCTGAGCTATAACGGTGTAgcctgttgctttaaatgcctGAAAACATTATACGGATGCTACAGTAGAGGAAAACCCCAGCAGTTATCAATGGATATTTGTGAAATCCTCACCTTACGCAAAAGACGCACTGCGTTTACTTACCCTGTAATGACTTgtttaaccaaataaatgtttactgaCTTGA
>XM_043217494.1
ATTTTGCTTATCCCCAGACTAAATAATTTGATTCTCTTAGGCTCGGagggagaagaagaagacgCGAGGGACCGTCTCCCGGAAGTGACATTTGACAACACCTCTAGCACGCAGTGATGACACTAAAAAGTCTTATATTGACATTCCTCTGATTTATCAATGATCAGTATCGTTGATTAGATGTTTATCGTCTGACAATCCGCGTAAGTGATTATGGGGAAGGGCTGTAAGGTGGTGGTTTGTGGGATGGCATCTGTGGGGAAAACAGCCATCCTGGAGCAGCTACTGTACGGCTCTCACACTGTAGGTGCAGAGACGAATGACACTCAGGAGGACATCTACGTGGCGTCTGTGGAGACGGACCGTGGTGTGAGGGAGCAGTTACGTCTCTACGACACTCGAGGCCTGCGAGAAGGGCTGGATTTACCCAAGCACTTCTTTTCAGTGGCTGACGGATTCGTGCTGGTCTACAGCGTCGACAGCCTGGAGTCCTTCAGAAAAGTCGAGCTCTTAAAGAAGGAGATAGACAAGTCCAGAGACAAAAAAGAGgtgATGGTGATGGTGCTGGGGAATAAGTGTGACCTGCGCGAGCGGAGGCAGGTGGATCAGGACGCGGCGCAGCAGTGGGCGCGAGGAGAGAAGCTCAAGCTCTGGGAGGTGAGCGTCACAGACCGAAGCTCTTTGATCGAGCCCTTCACCAGCCTCACCAGCCGCCTCACTCAGCCGCAGAGCAAGTCTGCCTTCCCTCTGCCCGGCCGCAAGAGCAAGGGCACCCCGTCCAGCGACATCTGAACACGTCCGTTCACACTCAGGATTGCTTTCTTTTCGTCATCGTGCTGCAGCGAATCTCCAAAACGAACAAGTCGTCCATGACCAAAAGATTTCATTCTCACTAACGCAGAGTTcttccagattttttttgtaactatgGTTCtcattgatttaataaaattgctgtattttacaatataaatgttatagaAATCTGTCTTTTTACATTATGGgtttccatttatttatgcaaatataacttatgttttataaaataatttattttgcgaCGGAACCCGAGAATCAGTAGCAGCACTCAAGATGATAGAATGGTACAGTAGAGAGAAAATGCACCGTTTATGTGTTTCTTCGGGCGCGAACTTCAGTCAAGAACAGGCAGAAGTGCTTTAAGATGCCGGTTAATAAAAAGACGGCGATGCTGTTATGTTAAAGCCATAtagtgcgtgtttgtgtgtatgataGCGTCGATTTATAATCTCCGATCAGCTGTTCCTTCCCTTTCTCTGAGCTATAACGGTGTAgcctgttgctttaaatgcctGAAAACATTATACGGATGCTACAGTAGAGGAAAACCCCAGCAGTTATCAATGGATATTTGTGAAATCCTCACCTTACGCAAAAGACGCACTGCGTTTACTTACCCTGTAATGACTTgtttaaccaaataaatgtttactgaCTTGA
>XM_043217495.1
TATTTTGCTTATCCCCAGACTAAATAATTTGATTCTCTTAGGCTCGGagggagaagaagaagacgCGAGGGACCGTCTCCCGGAAGTGACATTTGACAACACCTCTAGCACGCAGTGATGACACTAAAAAGTCTTATATTGACATTCCTCTGATTTATCAATGATCAGTATCGTTGATTAGATGTTTATCGTCTGACAATCCGCGTAAGAAACTGAGCATTCTGTGCAGATTATTCAGCAGTGATTATGGGGAAGGGCTGTAAGGTGGTGGTTTGTGGGATGGCATCTGTGGGGAAAACAGCCATCCTGGAGCAGCTACTGTACGGCTCTCACACTGTAGGTGCAGAGACGAATGACACTCAGGAGGACATCTACGTGGCGTCTGTGGAGACGGACCGTGGTGTGAGGGAGCAGTTACGTCTCTACGACACTCGAGGCCTGCGAGAAGGGCTGGATTTACCCAAGCACTTCTTTTCAGTGGCTGACGGATTCGTGCTGGTCTACAGCGTCGACAGCCTGGAGTCCTTCAGAAAAGTCGAGCTCTTAAAGAAGGAGATAGACAAGTCCAGAGACAAAAAAGAGgtgATGGTGATGGTGCTGGGGAATAAGTGTGACCTGCGCGAGCGGAGGCAGGTGGATCAGGACGCGGCGCAGCAGTGGGCGCGAGGAGAGAAGCTCAAGCTCTGGGAGGTGAGCGTCACAGACCGAAGCTCTTTGATCGAGCCCTTCACCAGCCTCACCAGCCGCCTCACTCAGCCGCAGAGCAAGTCTGCCTTCCCTCTGCCCGGCCGCAAGAGCAAGGGCACCCCGTCCAGCGACATCTGAACACGTCCGTTCACACTCAGGATTGCTTTCTTTTCGTCATCGTGCTGCAGCGAATCTCCAAAACGAACAAGTCGTCCATGACCAAAAGATTTCATTCTCACTAACGCAGAGTTcttccagattttttttgtaactatgGTTCtcattgatttaataaaattgctgtattttacaatataaatgttatagaAATCTGTCTTTTTACATTATGGgtttccatttatttatgcaaatataacttatgttttataaaataatttattttgcgaCGGAACCCGAGAATCAGTAGCAGCACTCAAGATGATAGAATGGTACAGTAGAGAGAAAATGCACCGTTTATGTGTTTCTTCGGGCGCGAACTTCAGTCAAGAACAGGCAGAAGTGCTTTAAGATGCCGGTTAATAAAAAGACGGCGATGCTGTTATGTTAAAGCCATAtagtgcgtgtttgtgtgtatgataGCGTCGATTTATAATCTCCGATCAGCTGTTCCTTCCCTTTCTCTGAGCTATAACGGTGTAgcctgttgctttaaatgcctGAAAACATTATACGGATGCTACAGTAGAGGAAAACCCCAGCAGTTATCAATGGATATTTGTGAAATCCTCACCTTACGCAAAAGACGCACTGCGTTTACTTACCCTGTAATGACTTgtttaaccaaataaatgtttactgaCTTGA

Function

symbol description
nkiras1 Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within I-kappaB kinase/NF-kappaB signaling. Predicted to be located in cytoplasm. Orthologous to human NKIRAS1 (NFKB inhibitor interacting Ras like 1).

NR:

description
PREDICTED: NF-kappa-B inhibitor-interacting Ras-like protein 1

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K17197 NKIRAS; NF-kappa-B inhibitor-interacting Ras-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217491.1 False 1481 mRNA 0.46 4 1987323 1990909
XM_043217492.1 True 1617 mRNA 0.45 4 1987321 1990909
XM_043217493.1 False 1614 mRNA 0.45 4 1987321 1990909
XM_043217494.1 False 1479 mRNA 0.46 4 1987322 1990909
XM_043217495.1 False 1512 mRNA 0.46 5 1987321 1990909

Neighbor

gene id symbol gene type direction distance location
top2b LOC107717721,LOC107700653,LOC107719851,LOC107655887,LOC107563214 coding upstream 288432 1674741 ~ 1698889 (+)
ints8 ints8,LOC107717725,LOC107719852,LOC107565239 coding upstream 341900 1626768 ~ 1645421 (+)
LOC122323560 NA coding upstream 366861 1612813 ~ 1620460 (+)
LOC122323558 LOC107565238,LOC107700642,LOC107717719,LOC107563205,LOC107727042 coding upstream 375367 1606099 ~ 1611954 (+)
LOC122324196 NA coding upstream 382124 1604392 ~ 1605197 (+)
sf3a3 sf3a3 coding downstream 35506 2026415 ~ 2032185 (+)
lin28ab lin28a,LOC107690946,LOC107708696,LOC107595909,LOC107732914 coding downstream 111835 2102744 ~ 2115503 (+)
pdik1l pdik1l,LOC107690927,LOC107732927 coding downstream 129059 2119968 ~ 2130526 (+)
foxo6b si:ch211-206a7.2,LOC107689548,LOC107732925,LOC107708715,LOC107690913,LOC107595898 coding downstream 162926 2153835 ~ 2181727 (+)
ctps1a ctps1a,ctps1,LOC107708718,LOC107689550,LOC108415321 coding downstream 320361 2311270 ~ 2318033 (+)
G129795 NA non-coding upstream 282789 1700588 ~ 1704532 (+)
G129743 NA non-coding upstream 454316 1532566 ~ 1533005 (+)
G129701 NA non-coding upstream 720311 1266709 ~ 1267010 (+)
G129675 thsd7aa,LOC107670038,LOC107566934,LOC107555944,LOC107698991 non-coding upstream 1024461 957018 ~ 962860 (+)
G129668 NA non-coding upstream 1168830 818223 ~ 818491 (+)
G129881 NA non-coding downstream 65496 2056405 ~ 2056882 (+)
G129886 NA non-coding downstream 91369 2082278 ~ 2082620 (+)
G129916 NA non-coding downstream 274308 2265217 ~ 2265435 (+)
G129936 NA non-coding downstream 352126 2343035 ~ 2343239 (+)
G129942 NA non-coding downstream 360389 2351298 ~ 2351565 (+)
LOC122323678 NA other upstream 13937 1966740 ~ 1973384 (+)
thrb thrb,LOC107743925,LOC107719848,LOC107700654,LOC106588669 other upstream 21631 1870158 ~ 1965690 (+)
LOC122323556 LOC107717722,LOC107700644,LOC107565248 other upstream 314537 1657258 ~ 1672784 (+)
G129682 LOC107664710 other upstream 880748 1072151 ~ 1106573 (+)
ppp1r8a ppp1r8a,LOC107690919,LOC107732917,LOC107708698,LOC108441741,LOC108272406,LOC105903676 other downstream 143743 2134652 ~ 2141332 (+)
G129993 NA other downstream 795016 2785925 ~ 2786348 (+)
LOC122323290 NA other downstream 894504 2885413 ~ 2887628 (+)
serinc2 serinc2,LOC107732928,LOC107689546,LOC107687316,LOC107708726,LOC108272915,LOC103358775 other downstream 898714 2889623 ~ 2893601 (+)
phactr4a phactr4a,LOC107550657,LOC107687470,LOC107595895,LOC107689543 other downstream 968684 2959593 ~ 2978416 (+)

Expression


Co-expression Network