ago2 (ago2,LOC107722143,LOC107593532,LOC107591597)


Basic Information

Item Value
gene id ago2
gene name ago2,LOC107722143,LOC107593532,LOC107591597
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12707267 ~ 12726366 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217499.1
tgaataaatgcattaaataaagcGCAAGgcgcgcgcacacgcacacacacacgcgcgttAGTGTCCGCTCCCTCgcagtgagagtgtgtgagtgtcgGGTAAATAGGCGCTCGTGCTGTGAAGGGGGGATGGGATGGGGCCACTGAGAGCTCTCGTGCTCCACTAACTCAGCGCGCTCATTAATCCCGGTTTTCTCCTTTATATCGATGctgttttaaactaaaattcGCGTTTCCCGTTACCGCATGTGTTACGTGGCACCGGAAAAGCAAAAAGTGTCGGCCTGCGATTGAATTTTGCTGCAGAAAGCGTTTAAAATGTATCCCATTGGAGCAGCTGGCGCTGCTGAGCTGTGTCAGGGACATCAGTCTTCAGGGTCAGATGTTTCTGCTCCCTTGTCTCCTCCAGCGCAAGAGTATGTCTTTAAACCACCTCAACGGCCAGACTTTGGCACAATGGGTAGGACAATCAAGCTTCAGGCCAACTTCTTTGAAATGGAAATACCCAAGTTGGAGGTGTACCATTACGACATAGATATAAAGCCTGAGAAATGCCCACGGAGAGTTAACCGtgaaATTGTTGAGCACATGGTCCAGCACTTTAAAACGCAGATCTTTGGAGATCGAAAGCCTGTGTATGATGGTCGGAAGAATCTCTACACTGCCATGCCTTTGCCCATCGGAAGAGACAAAGTGGAGCTGGAAGTCACAATTCCAGGCGAGGGAAAAGACAGGAGTTTTAAAGTAGCTATCAAATGGGTGTCCTGTGTGAGTCTGCAAGCTCTACATGAAGCACTGTCTGGACGGCTACCCAACATCCCTTTTGAGACCATTCAGGCTCTGGACGTTGTCATGAGACATTTGCCCTCTATGAGGTACACCCCAGTCGGTCGTTCATTCTTCACTCCCTCTGAGGGCTGCTCCAACCCCCTCGGTGGAGGAAGAGAAGTTTGGTTTGGCTTCCATCAGTCTGTTCGACCATCCCTCTGGAAGATGATGCTCAACATTGATGTATCTGCCACTGCATTCTACAAAGCTCAACCTGTTATTGAGTTCATGTGTGAGGTTTTGGATTTTAAAAGCATCGAAGAGCAACAGAAGCCCTTAACGGATTCCCAGAGAGTGAAGTTCACTAAGGAAATCAAAGGACTGAAGGTTGAAATCACTCACTGTGGACAGATGAAGAGAAAATACAGAGTGTGTAATGTGACTAGGAGGCCAGCCAGCCATCAAACATTTCCCTTGCAGCAAGAGAATGGTCAGACCATTGAATGCACTGTCGCCCAGTATTTCAAGGATAAGTACAAACTGGTGCTGCGATATCCACATCTCCCATGTTTACAAGTTGGTCAGGAGCAAAAACACACCTACCTTCCTTTGGAGGTCTGTAACATAGTAGCTGGACAGAGATGCATCAAGAAACTGACAGACAATCAGACCTCCACTATGATACGTGCCACAGCCAGGTCTGCACCTGACCGCCAGGATGAGATCAGCAAACTGATGAGAAGTGCCAACTTCAACACCGATCCTTATGTGCGTGAGTTTGGAGTTATGGTAAGAGACGAGATGACTGAGGTCAATGGTCGGGTCCTTCAGGCACCTTCAATTCTCTATGGTGGAAGGAACAAAGCAATAGCAACCCCGGTCCAGGGTGTGTGGGACATGAGGAACAAGCAGTTCCACACAGGGATTGAGATCAAAGTATGGGCTATTGCCTGCTTTGCCCCGCAGAGGCAGTGTACAGAACTTCTTCTGAAagCATTTACTGACCAGCTCCGTAAGATATCACGCGATGCAGGGATGCCCATTCAGGGCCAGCCATGCTTTTGCAAATATGCCCAGGGAGCAGACAGTGTGGAGCCCATGTTCAAACACCTCAAGTACACGTACCAAGGCTTACAGTTGGTGGTGGTCATCCTACCTGGGAAGACTCCCGTTTATGCTGAGGTGAAGCGCGTTGGAGACACTGTTCTGGGCATGGCCACCCAGTGTGTCCAGGTGAAGAATGTACAGAAAACCACACCTCAGACCCTTTCCAACCTCTGCCTCAAGATTAATGTCAAACTGGGTGGAGTCAACAATATTCTTCTTCCACAGGGCAGgcCCTTGGTGTTTCAGCAACCAGTCATCTTTCTGGGTGCAGATGTGACTCATCCACCAGCTGGAGATGGCAAGAAACCCTCAATTGCTGCTgTTGTTGGCAGTATGGATGCCCACCCAAGCCGATACTGTGCCACGGTGCGGGTGCAGCAGCACCGTCAAGACATCATTCAGGATCTAGCCACCATGGTGAGAGAGTTGCTGATCCAGTTCTACAAATCCACACGCTTTAAACCAACGCGCATCATCTACTACAGAGACGGAATTTCTGAGGGCCAGTTCAACCAGGTTCTACAGCATGAACTCCTGGCTATTCGTGAAGCCTGCATCAAGCTGGAGAAAGATTATCAACCAGGCATCACCTTTGTAGTAGTGCAGAAGAGACATCACACCAGACTCTTCTGCATGGACCGTAATGAGCGGGTTGGAAAGAGTGGCAACATCCCTGCTGGCACCACAGTTGACACCAAAATTACTCATCCTTCTGAGTTTGACTTTTATCTTTGCAGTCATGCCGGAATTCAGGGAACCAGCAGGCCGTCCCACTATCATGTGCTGTGGGACGACAACCATTTCACCTCTGATGAGCTGCAGGTCCTCACCTACCAGCTGTGCCACACCTACGTGCGCTGCACCCGCTCTGTCTCCATTCCTGCACCAGCCTACTACGCCCACCTGGTGGCGTTTCGTGCTCGCTACCACTTGGTTGACAAAGAACATGACAGCGCTGAAGGCAGTCACACGTCAGGTCAGAGTAACGGCAGAGACCATCAAGCCCTGGCCAAAGCTGTGCAGATCCACCAGGACACACTGCGCACCATGTACTTCGCCTGAACATAGCCAGAAACAAGCCCTACATCCTGAAAACAGcacgACAAATGAGCAGTGAGCAGCTCTGAGCTGTGAAGAGCGAGTCAGATTTTCCAATAGCTCATTTATGAAAGGCACGCGAGCTCCGCTTCTGCCCGCTGAGATATAATAGACTGAGTATGCTGTTGCTCCAGGACAGAATGAGAAGGACCTGTTTGTCCTGGTGCCTTTCCCTCCTGTTTGTCTGGTACCCAGCGGGCAGCATAGTGACGGAGCTGGAGCTGGAGGATTTGGACTGGGAATGGGGTTCTGGATTACACGAACTCCTAAACAGCTTTCCAGCCGATAGCCCGTTTGTCAGAGAGATGCCTGGCAGGCCGGCCAACTGCACTCAGCGCTTCTGGCTTCCTCCATCCTCCCCTGTGTGCTGGGATGATATAGCAGGCCCAGAGGAGTTTGAGAAGTCCCGTCTCCTCGTCCTGCAGAACAGGGCGGCACTGCAGGCCGTATCCACATCTAGCGGCCTCGAGGAAGGGGGTGCGTCCTACGATCTGCAGGCCAAGGAGAACATGCAGGGTGTCCGGGATGACCATCTCACCGTGGCCCAGACGGCCGATACAATGCAGAAGGTGTTTATGGATTTGGATGAGAAGAGGAAGGAGGGGAAAGAGCATTACACCTTCTCAAGtctgAAGGAGCAAATCGACAACACGAAAGACTCCATTGCTAAAAAGGAGCAAGTAGCAGCTTTTCTAGAGAAACATCTTGCCAATCTGGAGAGGTCTTTGAGCACCATGCAGCTTCGACTGGACAAACTACTTCCCCAGTAATTTCACTTGAGCAGCACAACCTTCACGTGTGAAAATTAATGCAATGCAtgctttcttttacattttatcaaacAAACGAACCAGACTTGTATGACCGTGTACTGCATGCCGACAGCACCATGTATTTCTCTTTTGGTACGTATTTGTTTCCACTCTATTAAAGTAAATGGGATAAATATTAGGTAACGgcaataaaatctatttttatac

Function

symbol description
ago2 Enables miRNA binding activity and pre-miRNA binding activity. Acts upstream of or within nucleate erythrocyte differentiation and pre-miRNA processing. Predicted to be located in P-body. Predicted to be part of RISC complex. Is expressed in several structures, including eye; fin; integument; intermediate cell mass of mesoderm; and pleuroperitoneal region. Orthologous to human AGO2 (argonaute RISC catalytic component 2).

NR:

description
protein argonaute-2-like isoform X7

GO: NA

KEGG:

id description
K11593 ELF2C, AGO; eukaryotic translation initiation factor 2C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217499.1 True 3952 mRNA 0.50 23 12707267 12726366

Neighbor

gene id symbol gene type direction distance location
dlx6a dlx6,dlx6a,LOC107670195,LOC107665661,LOC107731570,LOC107722133 coding upstream 6656 12698137 ~ 12700611 (+)
LOC122323728 dync1i1,LOC107731605 coding upstream 86247 12569233 ~ 12621020 (+)
asb4 asb4,LOC107722148,LOC107670212,LOC107731816,LOC107665668,LOC107577102 coding upstream 151140 12552083 ~ 12556127 (+)
ppp1r9a ppp1r9a,LOC107669756,LOC107722146,LOC107731638 coding upstream 158428 12504438 ~ 12548839 (+)
casd1 casd1,LOC107722141,LOC107665666,LOC107669810,LOC107731667,LOC107591593 coding upstream 210135 12487781 ~ 12497132 (+)
crtc2 LOC107722160,LOC107593533,LOC107669709,LOC107665671,LOC107731562,LOC107591598 coding downstream 2100 12728466 ~ 12736517 (+)
si:ch211-57n23.4 si:ch211-57n23.4,LOC108424704,LOC107593575,LOC107670070,LOC107722127,LOC107731740,LOC107665655 coding downstream 13231 12739597 ~ 12761128 (+)
gatad2b gatad2b,LOC107593536,LOC107706168,LOC107731554,LOC107591599,LOC107696601 coding downstream 67611 12793977 ~ 12829799 (+)
tinagl1 tinagl1,LOC107706169,LOC107593537,LOC107669690,LOC107731519,LOC107696600,LOC107591600 coding downstream 116016 12842382 ~ 12862088 (+)
si:ch211-13c6.2 LOC107706172,LOC107593539,LOC107669634,LOC107731497,LOC107696596 coding downstream 217108 12943474 ~ 12952055 (+)
G132472 NA non-coding upstream 38713 12667293 ~ 12668554 (+)
G132448 NA non-coding upstream 150065 12556964 ~ 12557202 (+)
G132421 sgce,LOC107722147,LOC107731676,LOC107665667 non-coding upstream 206726 12499142 ~ 12500541 (+)
G132376 NA non-coding upstream 309906 12378273 ~ 12397361 (+)
G132498 LOC107593576,LOC107731729,LOC107706171,LOC107696598 non-coding downstream 60278 12786644 ~ 12865595 (+)
LOC122323456 NA non-coding downstream 105275 12831641 ~ 12834525 (+)
G132541 psmb4,LOC107593590,LOC107669568,LOC107706179 non-coding downstream 375583 13101949 ~ 13102925 (+)
G132547 LOC107591615,LOC107696587,LOC107731336,LOC107696584,LOC107552275 non-coding downstream 392350 13118716 ~ 13123966 (+)
G132549 NA non-coding downstream 399511 13125877 ~ 13126617 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other upstream 282189 12423290 ~ 12425078 (+)
LOC122323774 NA other upstream 594370 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 1183386 11522229 ~ 11523881 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 2289171 10415640 ~ 10418096 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 2953711 9734220 ~ 9753556 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 295051 13021417 ~ 13026026 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 583061 13309427 ~ 13336749 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 2061178 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 2108235 14834601 ~ 14837969 (+)
LOC122323518 LOC107654743,LOC107688368,LOC107602377,LOC108413484,LOC107706254,LOC107710329 other downstream 2352088 15078454 ~ 15192566 (+)

Expression


Co-expression Network