asns (asns,LOC107754811,LOC107731557,LOC107702657,LOC107672863)


Basic Information

Item Value
gene id asns
gene name asns,LOC107754811,LOC107731557,LOC107702657,LOC107672863
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5923625 ~ 5932827 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217637.1
GGCAACGTCGTTACGTTTGGACCAATCAGCGCCAGGGCGGAAACGACAAGAATCTGCAGAAACACCGCACGTGTGTTTCATCAGCCGAGCATCGCCGAAGAAGAACGGGAAGCTCTCCCATCTCAACCAACGTAGACCAAATCCAGCGTCTTTTACAGGCATTACTAGAATGTGTGGTATATGGGCCCTGTTCGGGAGCGATGAGTGCCTTTCGGTTCAGTGCAGCAATGCTATGAAAATCGCTCATCGTGGACCGGACGCTTTCCGCTTCGAGAATGTCAACGGCTTCACCAACTGCTGCTTCGGCTTCCACCGCCTCGCCATCGTGGACCAGCTGTACGGCATGCAGCCCCTGCGCGTCAAGAAGTTCCCCTACCTTTGGCTCTGCTACAACGGCGAGATCTACAACCACACCAGGATGAGGAACCACTTTAAGTTTGAGTATCAGACTAAAGTGGACGGCGAGATCCTTCTGCACCTGTACGATCGCTTTGGAATCGAGAAGATGGCCTCCATGCTAGATGGCGTGTTTGCCTTCATCTTGTTGGACACGGCTAACAGGAAGGTCTTCTTGGGCAGAGACACGTACGGCGTGAGACCGCTGTTCAGACTGCTCACCGACAACGGCTTTCTGGCCGTCTGTTCCGAGGCCAAAGGTTTGCTGGACCTCAAAACCTCCATGTCCACTCCTGCAAAGATCACTCCCTTCCCACCGGGACACTTTGAGGTGTTTGACCTGAAGACCTCTGGAAAAGTGGAGTCTGTTCAGATGGATCGCTTTCACTGCTGCACAGAAGAACCCAAGCATGCTGCCTACAACATCCTGGAGGGCCTTGGCACAGGCTTTGAACTGGAGACGGTGAAGAGCAACATTAGGATCCTGTTTGAAAGCGCGGTAAAGAAACGCTTGATGGCTCACAGAAGAATCGGTTGCCTGCTCTCAGGTGGTCTCGATTCAAGTCTGGTTGCTGCTACTCTTGTGAAACTGGCCAAAGAAAAGCAGCTCCCGTATCCCGTCCAGACATTTTCCATCGGTGCCGAGGACAGCCCAGATGTTGCTGCCGCTCGCAAGGTGGCGGCGCACATTGGCAGTGAACACCATGAAGTGAGCTTCACTCCTGAGGAGGGCATCCGTGCGCTGGAGGAAGTCATCGTTCACTTGGAGAGCTACGACATCACCACCGTGCGTGCCTCTGTCGGAATGTACCTGATATCAAAGTACATCCGTGAGAAGACGGACAGCGTTGTGATTTTCTCAGGTGAAGGTTCAGATGAATTGACACAAGGATACATCTACTTCCATAAGGCGCCGTCACCTGAAGCAGCTGCTGAGGACAGTGTGCGTCTGCTGGAAGAGCTTTATCTGTTTGACGTGCTGAGAGCGGACAGAACCACAGCCGCACACGGACTGGAGTTGAGAGTGCCTTTCCTGGATCACAGGTTCACAGCATACTACCTCTCTCTGCCTGAGGAGATGAGAGTGCCTAAGGACGGTGTGGAGAAGCATCTCTTGAGGGAATCGTTTAAAGGGCTGAACCTCATCCCAGATGAGATACTCTGGAGGAGGAAGGAGGCCTTCAGTGACGGAATGACTTCCATGAAGAAATCCTGGTACGCCAGTCTTCAGGAGCACATCGAGGATGAGGTGAACGACTGTCAGCTGGAGAAAGCCAGTGAGAAGTTCCCTTTCAATCCTCCCACAACCAAAGAGGGCTTCTTCATAAGGACGATCTTTGAGAAGCATTACCCCGGCCGCTGTGAGTGGACCCCACATTACTGGATGCCCCGCTGGATCAAGGCCACAGACCCCTCGGCCAGAACCCTGTCCATCTACAAGCCCGATAAAGACCAGTAATCCCATCAAGCCTCAGACCACACAACTACAATGTTGccattatttaaatgcttttttttttttttttttttttgccttattttCTCTGTTCCCTTTACTAGACTAtcttttaggggttttttttccaaatagaaTTTATATTCGAGGTATTTTTCGAGGTTGCCGTGTTACTGTATCCTCTTATCAGGTTATAGGTTtctaaaatatagaaatagagcttttcttttctctaaCCAAAACAGGAGTGGGCTAGCGTGGCTTGTtggttaaaataaattgcacagtAATTGTTTCTtgtaaaaacagacaaattGTCACAACAGTCAAGCTATGGTGACCTAATATGATGTAAGTTCAagtcaaaaacacagaaagctTCTTAGTTTGAAGTAGACTCCATATTCAGTTATCCTGTCACATTAGTAAGGAATATATACAGTGCCGCTCAAAGGTTGGGGATCGCTAGTTTTTAAAGAAGCCCTCTCCAAATCCCAAAAAGATGCgtttatttgatgaaatacAGTACTGCTGTAAATATTACTAGttgaacacatttaataatttgctgATGCgaagcttaattttcagcatcattacggTTTTCTTCATAGTGTcccgtgatccttcagaaatcattcaaatatactgatttgctgctcgagcAATTTAAGCACTTATAGTTAGGCTGAAATGTAAGTAGTAATGTTACAAAGTTatatttcccaaaaaaaaagagttgccCTTAActtctgaatggtagtgtacatgTATTTTGGGTTTACTGGTGAATGAactaataattgtttttataatatctgGACTGAAAACCTTGGACTATGCACTTCTCCTAGATTCCTGCAGTGGGACTCCCACTTTAATGATTGTATTTGTGTGCTAATTGACCCAAGTAAATTATTGTTTGGCTATTTAAAACATTCCCGCTGCttttaagcagttatttattcTCCCCCCAACCCCCCTTTTTGTATGTTCTGTGGTGCGGCATCACTTTAAACTAGAAATGTGCTCTGAATTCGAGTAAAGGATGGTGCATGTAGTGTGACTGTTTAAAGTTTTAGACTTTAATGTGCAACATTCTGAGCTATCACATTAAACGATCTGGTCGTGGTATTGATGAA
>XM_043217638.1
TGGCGTGTTCCTTTAAGCGCGCGCGCTGACGCAACTAATTCGGTTAAcgccgctgctgctgctaaTGATTAGCGGCTAACGATAACAGCTGTCACTTTAAAGGACGAGGAAACGTAAATGTGACTTGGTGGACAACTGTGGGCAAAACTTTCATTGAAGTTTTTATTCGAATGTGTGGTATATGGGCCCTGTTCGGGAGCGATGAGTGCCTTTCGGTTCAGTGCAGCAATGCTATGAAAATCGCTCATCGTGGACCGGACGCTTTCCGCTTCGAGAATGTCAACGGCTTCACCAACTGCTGCTTCGGCTTCCACCGCCTCGCCATCGTGGACCAGCTGTACGGCATGCAGCCCCTGCGCGTCAAGAAGTTCCCCTACCTTTGGCTCTGCTACAACGGCGAGATCTACAACCACACCAGGATGAGGAACCACTTTAAGTTTGAGTATCAGACTAAAGTGGACGGCGAGATCCTTCTGCACCTGTACGATCGCTTTGGAATCGAGAAGATGGCCTCCATGCTAGATGGCGTGTTTGCCTTCATCTTGTTGGACACGGCTAACAGGAAGGTCTTCTTGGGCAGAGACACGTACGGCGTGAGACCGCTGTTCAGACTGCTCACCGACAACGGCTTTCTGGCCGTCTGTTCCGAGGCCAAAGGTTTGCTGGACCTCAAAACCTCCATGTCCACTCCTGCAAAGATCACTCCCTTCCCACCGGGACACTTTGAGGTGTTTGACCTGAAGACCTCTGGAAAAGTGGAGTCTGTTCAGATGGATCGCTTTCACTGCTGCACAGAAGAACCCAAGCATGCTGCCTACAACATCCTGGAGGGCCTTGGCACAGGCTTTGAACTGGAGACGGTGAAGAGCAACATTAGGATCCTGTTTGAAAGCGCGGTAAAGAAACGCTTGATGGCTCACAGAAGAATCGGTTGCCTGCTCTCAGGTGGTCTCGATTCAAGTCTGGTTGCTGCTACTCTTGTGAAACTGGCCAAAGAAAAGCAGCTCCCGTATCCCGTCCAGACATTTTCCATCGGTGCCGAGGACAGCCCAGATGTTGCTGCCGCTCGCAAGGTGGCGGCGCACATTGGCAGTGAACACCATGAAGTGAGCTTCACTCCTGAGGAGGGCATCCGTGCGCTGGAGGAAGTCATCGTTCACTTGGAGAGCTACGACATCACCACCGTGCGTGCCTCTGTCGGAATGTACCTGATATCAAAGTACATCCGTGAGAAGACGGACAGCGTTGTGATTTTCTCAGGTGAAGGTTCAGATGAATTGACACAAGGATACATCTACTTCCATAAGGCGCCGTCACCTGAAGCAGCTGCTGAGGACAGTGTGCGTCTGCTGGAAGAGCTTTATCTGTTTGACGTGCTGAGAGCGGACAGAACCACAGCCGCACACGGACTGGAGTTGAGAGTGCCTTTCCTGGATCACAGGTTCACAGCATACTACCTCTCTCTGCCTGAGGAGATGAGAGTGCCTAAGGACGGTGTGGAGAAGCATCTCTTGAGGGAATCGTTTAAAGGGCTGAACCTCATCCCAGATGAGATACTCTGGAGGAGGAAGGAGGCCTTCAGTGACGGAATGACTTCCATGAAGAAATCCTGGTACGCCAGTCTTCAGGAGCACATCGAGGATGAGGTGAACGACTGTCAGCTGGAGAAAGCCAGTGAGAAGTTCCCTTTCAATCCTCCCACAACCAAAGAGGGCTTCTTCATAAGGACGATCTTTGAGAAGCATTACCCCGGCCGCTGTGAGTGGACCCCACATTACTGGATGCCCCGCTGGATCAAGGCCACAGACCCCTCGGCCAGAACCCTGTCCATCTACAAGCCCGATAAAGACCAGTAATCCCATCAAGCCTCAGACCACACAACTACAATGTTGccattatttaaatgcttttttttttttttttttttttgccttattttCTCTGTTCCCTTTACTAGACTAtcttttaggggttttttttccaaatagaaTTTATATTCGAGGTATTTTTCGAGGTTGCCGTGTTACTGTATCCTCTTATCAGGTTATAGGTTtctaaaatatagaaatagagcttttcttttctctaaCCAAAACAGGAGTGGGCTAGCGTGGCTTGTtggttaaaataaattgcacagtAATTGTTTCTtgtaaaaacagacaaattGTCACAACAGTCAAGCTATGGTGACCTAATATGATGTAAGTTCAagtcaaaaacacagaaagctTCTTAGTTTGAAGTAGACTCCATATTCAGTTATCCTGTCACATTAGTAAGGAATATATACAGTGCCGCTCAAAGGTTGGGGATCGCTAGTTTTTAAAGAAGCCCTCTCCAAATCCCAAAAAGATGCgtttatttgatgaaatacAGTACTGCTGTAAATATTACTAGttgaacacatttaataatttgctgATGCgaagcttaattttcagcatcattacggTTTTCTTCATAGTGTcccgtgatccttcagaaatcattcaaatatactgatttgctgctcgagcAATTTAAGCACTTATAGTTAGGCTGAAATGTAAGTAGTAATGTTACAAAGTTatatttcccaaaaaaaaagagttgccCTTAActtctgaatggtagtgtacatgTATTTTGGGTTTACTGGTGAATGAactaataattgtttttataatatctgGACTGAAAACCTTGGACTATGCACTTCTCCTAGATTCCTGCAGTGGGACTCCCACTTTAATGATTGTATTTGTGTGCTAATTGACCCAAGTAAATTATTGTTTGGCTATTTAAAACATTCCCGCTGCttttaagcagttatttattcTCCCCCCAACCCCCCTTTTTGTATGTTCTGTGGTGCGGCATCACTTTAAACTAGAAATGTGCTCTGAATTCGAGTAAAGGATGGTGCATGTAGTGTGACTGTTTAAAGTTTTAGACTTTAATGTGCAACATTCTGAGCTATCACATTAAACGATCTGGTCGTGGTATTGATGAA

Function

symbol description
asns Predicted to enable asparagine synthase (glutamine-hydrolyzing) activity. Predicted to be involved in asparagine biosynthetic process. Predicted to act upstream of or within cellular amino acid biosynthetic process and glutamine metabolic process. Predicted to be active in cytosol. Is expressed in liver and male organism. Orthologous to human ASNS (asparagine synthetase (glutamine-hydrolyzing)).

NR:

description
asparagine synthetase [glutamine-hydrolyzing]

GO:

id name namespace
GO:0070981 L-asparagine biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity molecular_function

KEGG:

id description
K01953 asnB, ASNS; asparagine synthase (glutamine-hydrolysing)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217637.1 False 2994 mRNA 0.46 12 5923625 5932827
XM_043217638.1 True 2995 mRNA 0.46 12 5923625 5932020

Neighbor

gene id symbol gene type direction distance location
LOC122323838 npr1a,LOC107694365,LOC107754786,LOC107731544,LOC107677481,LOC107595610,LOC107584346 coding downstream 87247 5811984 ~ 5836378 (-)
LOC122323412 c1galt1,si:dkey-202e17.1,LOC107702589,LOC107568284,LOC107754798,LOC107731548 coding downstream 179048 5739319 ~ 5744577 (-)
umad1 si:dkey-119m17.2,umad1,LOC107598207,LOC107568281 coding downstream 207338 5706149 ~ 5716287 (-)
glcci1a glcci1,LOC107702447,LOC107731573 coding downstream 218315 5675485 ~ 5705310 (-)
rims3 rims3,LOC107672861,LOC107598211,LOC107702460,LOC107571463,LOC107731575 coding downstream 253254 5614268 ~ 5670371 (-)
bloc1s4 bloc1s4,LOC107672822,LOC107568287,LOC107702415,LOC107731556,LOC107598233 coding upstream 805 5933632 ~ 5938584 (-)
pard6gb pard6gb,LOC107672872,LOC107754812,LOC107702404,LOC107731577 coding upstream 6623 5939450 ~ 5970571 (-)
dtnbp1b dtnbp1b,LOC107568291,LOC107754801,LOC107731565,LOC107694327,LOC107598220 coding upstream 230996 6163823 ~ 6192690 (-)
csnk2b csnk2b,LOC102207154,LOC106594067,LOC101175345,LOC100710962,LOC106573472 coding upstream 457990 6390817 ~ 6395006 (-)
prrc2a LOC107754821,LOC107694359,LOC107584310,LOC107711320,LOC107595587,LOC107677454 coding upstream 462932 6395759 ~ 6415177 (-)
G130920 NA non-coding downstream 40258 5752585 ~ 5883367 (-)
G130914 NA non-coding downstream 46912 5745848 ~ 5876713 (-)
LOC122324223 NA non-coding downstream 75866 5838793 ~ 5847759 (-)
G130880 NA non-coding downstream 248747 5674554 ~ 5674878 (-)
G130827 NA non-coding downstream 400659 5520939 ~ 5522966 (-)
G130955 NA non-coding upstream 174312 6107139 ~ 6162535 (-)
G130969 jarid2,LOC107568290,LOC107702394,LOC107754814,LOC107694367,LOC107731546 non-coding upstream 220212 6153039 ~ 6155564 (-)
G130973 NA non-coding upstream 265298 6198125 ~ 6198361 (-)
G130978 NA non-coding upstream 301217 6234044 ~ 6236277 (-)
G130982 NA non-coding upstream 315524 6248351 ~ 6293266 (-)
LOC122324254 NA other downstream 517989 5404516 ~ 5405636 (-)
G130744 sema4ab,LOC107702572,LOC107672813,LOC107598230,LOC107731578,LOC107705066 other downstream 663461 5141505 ~ 5260164 (-)
G130763 NA other downstream 671436 5245353 ~ 5252189 (-)
LOC122323502 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other downstream 700742 5087244 ~ 5222883 (-)
G130696 NA other downstream 981793 4743572 ~ 4941832 (-)
G131006 LOC107754818,LOC107731580 other upstream 429520 6362347 ~ 6363172 (-)
sh3bp5lb sh3bp5lb,LOC107711328,LOC107677461,LOC107694325,LOC107754828,LOC107584304,LOC108435520 other upstream 694771 6627598 ~ 6639220 (-)
polr1h znrd1,LOC107584303,LOC107754832,LOC107677479,LOC107694346,LOC107595594 other upstream 715563 6648390 ~ 6649389 (-)
srd5a1 srd5a1,LOC107691541,LOC107711310,LOC107595623,LOC107694335 other upstream 917542 6850369 ~ 6858660 (-)
LOC122323893 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other upstream 1423794 7356621 ~ 7360143 (-)

Expression


Co-expression Network