lrrc14b (lrrc14b,LOC107706156,LOC107654673,LOC107742820,LOC107696555)


Basic Information

Item Value
gene id lrrc14b
gene name lrrc14b,LOC107706156,LOC107654673,LOC107742820,LOC107696555
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 13638212 ~ 13642069 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217663.1
CTCCCTCATGCTCTCGCTCAGCACCCTTCTGTTTGTGGGTTGACGCACATGTATATGTTAGTTGAAAGCGAGCAGAAGAAACGCTCCATATCTCCAAAAGGCTGACAGCTCTAAGAAGATTCCTTGATCTTGGGAGCTGACAAACGCAGCCATGAAGAGCTTGAAGTTCCTAGCAGCTGAGGGCTTCGTTCAAACCGGCCCAAACGCGTGTAAGAACCTTCACTGCTTGTCTTACAATCTCTACCCAATCCTCTTCAAAGCCAGCTATCTGCGTGAGGAGGCCACAATGCTGCACGACTTGATCCAGACGTGGCCCCTGACAGAGGTCAACTTGCGCAAACTGTTGAGCAGAACAGTGGACTGTCCAGATGATCTCACGTCCCGAACCTGCCGGCTCTGTCTGGAGGCCATTCTCACAGGCCTGAGGGACTATGTGCTTCGAGAGCCAAGCACGTACGCAAAAACGTTACGTGTGGTGGATCTAAACGGTCTGCAAGACATAGAACACCAGGTCTGTCCCTGCAGACGGACTCTCGGCCGTTGGGCAAGAACTGAGCTGCTTACCCGCATGTGCTACGAGACTATGGTGTCCATGCAGGCCGGCCAAGCAGCACCATCAGCGTTTGACGTGGAGGTAGATGTGCGCCTGGATGCTTTTGTTACTGGACGGAACTATGAGGTTGTTGCTCAGGCTCTGTTGCTGCGCAGACACTGCCCGTTAAAACTGAACTTCGTGGGTCTGCGCGTGGACTCGCTGAGCCTCAAGAATCTCTTTTACCTTCTGAAGCTGGTGGAATCACATGGCCTGCAGAAGCTGGAAGTGGTGCACAATGTGCATCTGGAGGCCCCGCACATTGAGGTACTGCTCTCCCAGCTGACGTTCCCACAGCTGCGCTCGCTCACGTTTCCTGCGCAGGCTTTGAATGTGCACAGGTTGGTGCAGGAGGACGCGGGACTCATGGGAGTTCTGGGTGAGCTGATGAGCAAACTGACTGAACTGAGAGAACTCTATCTGGGGTTCTCCACACTTACTGGACATCTGAGGAAACTGCTAAGTCCACTGAACACTCCTCTGCAGTGTATTGAATTAGCCAACTGCAGTCTTAATGGAGTGGACATGGCCTACTTCGCCAACAGCCTGCACAGTGAGCACATAGTGAAGCTGGACCTGAGCGGCCATGAGGTCGCTGACCTCTTCCCTAACACCTTCCGGAAGCTTCTGCATCGCTGTTGTGCCTCACTCACTAGTCTGGGTCTGGAGGAGTGTGGACTGGATGATGATAAACTGGATCTGCTTACCCAAGCACTGACACCCTGTCATGGCCTACAGGAGTTGAAGATCCTGGGTAACCCACTCAGCACGGCTGCTCTGCGCGGTCTCTTTAGCATGCTGGCTCTGGGGTTTCCTGCATTGAGaTATGTGGAGTTACCTGTTCCTCGGGACTGTTATCCTGAAGGTGTTACCTATCCACTGGATGATAGAACGCTGATAAATTATGACACAGAGAAGTTTCAACAAGCCAGGACTGAACTTGTTGGCATCCTAGAGAGGGAGGGAAAAGGGCATATAGATGTCTGCACACCATTATTTGGAGCCTTTGATCCTGACATCAACGAGACGAGCAATGAATTGGGGGTCTCCATGCTGCACTCCTTCAACAGTGTCATAGGAAACTTCATCGACACGGTCAACAGTGTTACCCAACGGAGAGAGCAAAGAATGAAGGAGTGAGAGTGCTGAAAATCACTCTTGCCGTCCCAGGAATGAAATACAGtagaaatatattgaaatacatTGTCAcagtatttgatcaaataaatgcagccttgagcaactgaaaataaaaaccttaCAGAGTGCAAACTTGaggaaattaatatttactgtataaagcatttaaaacaaatgcataacatttaacaacttattaatgcttttttagcACCAGCACAGGTATCTCATGTTCATAAAACATATacttaaaacagcttttttttttttctccagttttcctacataattttaaaaagctaatgAATTTAGTGAATCCACAGCACATATGAAGGttggaataaaaaaactaaaagatcaGTTGCTACAAATAATACATAGGGAcgtaataatgtatattaaggTGCGCAATAAAGAATTCTATAGGAGTTTACAGCTGTAAATGCATAAGATTTATTTGTGTGATTGTACTTTTGTAAATGTTGAATAGTGAACACTGTTCCAgttatgaaatgttaaaatcttTTGCAAAGTCTTTGTAAATTGCATATATACAGTAACTGCACATTGTGCATTTGGTCTTTTTAAACTCTGTATTTAAACAAATAGCCTTATCTTTGTAGTACACTGCATCCCATTAAAAGATTCATTGAATACCAA

Function

symbol description
lrrc14b Predicted to act upstream of or within several processes, including negative regulation of apoptotic process; negative regulation of transcription, DNA-templated; and positive regulation of cell population proliferation. Predicted to be active in cytoplasm. Orthologous to human LRRC14B (leucine rich repeat containing 14B).

NR:

description
PREDICTED: leucine-rich repeat-containing protein 14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217663.1 True 2392 mRNA 0.46 4 13638212 13642069

Neighbor

gene id symbol gene type direction distance location
LOC122323661 LOC107654672,LOC107706155,LOC107592076,LOC107742821,LOC107696516,LOC107696575 coding upstream 124 13627237 ~ 13638088 (+)
ankib1a LOC107706216,LOC107654707,LOC107742824,LOC107696581,LOC107589494 coding upstream 83378 13536137 ~ 13554834 (+)
lypla2 lypla2,LOC107654706,LOC107706215,LOC107696570,LOC107742825 coding upstream 103234 13528592 ~ 13534978 (+)
pithd1 pithd1,LOC107654704,LOC107696572 coding upstream 110294 13525347 ~ 13527918 (+)
eloa tceb3,zgc:55573,LOC107589441,LOC107742827,LOC107706212,LOC107654666 coding upstream 113280 13517125 ~ 13524932 (+)
utp23 utp23 coding downstream 700540 14342609 ~ 14343877 (+)
stmnd1 LOC107592082,LOC107706159,LOC107654715 coding downstream 745686 14387755 ~ 14391343 (+)
rbm24a rbm24a,LOC107696536,LOC107592929,LOC107706227,LOC107654717,LOC107754275,LOC107591968 coding downstream 752567 14394636 ~ 14405903 (+)
cap2 cap2,LOC107706226,LOC107754274,LOC107592045 coding downstream 766920 14408989 ~ 14428817 (+)
vps28 vps28,LOC107696523,LOC107592928,LOC107754273 coding downstream 789633 14431702 ~ 14434903 (+)
G132774 NA non-coding upstream 76767 13561167 ~ 13561445 (+)
G132773 NA non-coding upstream 81533 13555011 ~ 13556679 (+)
G132754 klhl43,LOC107589442,LOC107706211,LOC107742826,LOC107591641,LOC107696549,LOC108426671 non-coding upstream 124316 13513022 ~ 13513896 (+)
G132755 klhl43,LOC107706211,LOC107589442,LOC107742826,LOC107696549,LOC107591641 non-coding upstream 125241 13511608 ~ 13512971 (+)
G132549 NA non-coding upstream 511595 13125877 ~ 13126617 (+)
G132884 NA non-coding downstream 204713 13846782 ~ 13848115 (+)
G132910 NA non-coding downstream 455207 14097276 ~ 14106261 (+)
G132913 trps1,LOC107706219,LOC107592043,LOC107754280,LOC107696539,LOC107562946 non-coding downstream 526026 14168095 ~ 14168484 (+)
G132916 NA non-coding downstream 533770 14175839 ~ 14582416 (+)
G133068 NA non-coding downstream 1115555 14757624 ~ 14757976 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other upstream 301463 13309427 ~ 13336749 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other upstream 612186 13021417 ~ 13026026 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other upstream 1213134 12423290 ~ 12425078 (+)
LOC122323774 NA other upstream 1525315 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 2114331 11522229 ~ 11523881 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 1145475 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 1192532 14834601 ~ 14837969 (+)
LOC122323518 LOC107654743,LOC107688368,LOC107602377,LOC108413484,LOC107706254,LOC107710329 other downstream 1436385 15078454 ~ 15192566 (+)
LOC122323314 LOC107602378,LOC107591987,LOC107706255,LOC107710332,LOC107688367,LOC107654747 other downstream 1666658 15308727 ~ 15313877 (+)
anxa14 LOC107706258,LOC107654687,LOC107710308,LOC107592054,LOC107688418 other downstream 1713539 15355608 ~ 15361845 (+)

Expression


Co-expression Network