si:ch211-13c6.2 (LOC107706172,LOC107593539,LOC107669634,LOC107731497,LOC107696596)


Basic Information

Item Value
gene id si:ch211-13c6.2
gene name LOC107706172,LOC107593539,LOC107669634,LOC107731497,LOC107696596
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12943474 ~ 12952055 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217692.1
CGCAATTGTACCACAGAAGGAGCCGAGGACTAAGGAAGTGGGTGAAAATTGTATTACATCACTTTTGATTTTGTAATgtcgatttatttattttacttttcaagAAGAAAATAGTTTTACGTTGAATGCGTTGCAAACGCAAGTTATTAACTCGCTGATCTTGTGCTGATCCTCGCGGACGAAGCTTCACAGTAGTTTCGAAACATGGCCGATTTGCTGACAGTGTACGACGATGACCAGGCCAACAGCTTCATCGACTGCACGATCTGCGATAAAAGAATACGGGGAGAAACGCATTACAAAATCCACGTGACCACATTACAACATTTAAAGAAAGAGGACACCCTGGCTTCACAAGGAGAGATTCTGAGAACACCTCCACTGCCAGAATGGACCGACATAATAGAATATTTGGATTACCTGAATCTTGATGAGCCCATTATTGGTCTCAACTCCCTGATACAGATTCCAGATCATGTCACTGACGATGGCAAAACAGTGTTGAAGTACAAGTGCAGAATGTGTGTCGTGGAGATGGACCTTTACAGCATGGTGGCCCATATTGTAGGACGtaaacacagacaaaaatacTTGGAGCTGAAAAGACCAGACTTGGTGACATGGCAAGACAACAATCAGAAACAGCCAGGTCTTGTGGCCAGAGCTAAAGCTGCTGTAGTTGAAAAGCAGGAGGGATGGGGAAAGCCAGTGGCACTCAAACGACCTCAAGAGAAATTCAGAAATGTCTTCCAAGGAGGAAGCGATTTACGTGCCAGTGTTCATGAACAACCCTACTATGGACAAGAGCCTCTTAGGAAGCCACCTTTCCCTGAACAGGTTCAAAATCAGATGTATTTGGATGAAGAACAGCATGGAAGTTCCTATTATACAGGAGATAATTATGACCAGTGCAGCAGACCTAAAAATCCAACCCACGATGTCCACCAACAATTCTATCCAGAAGAAAACCAACATCAAAAACATTACGAAAATGCTGACGTTCGAGGAAGACACTCACGAGGTGATGGTTATTCGGAAAGAGAAGTGCATACTAGGCCCTATGCAGAACAGGGTGGACGGAGACTGCAAGAATACTATAAAGAAGAAAGTCTTGGCGGAGGACAGTTCTCAGGAGGTAAAATAAACCGATTTAATGACAAAGACCTCAGAATCCGCCCAGGAGCATCAGAATATCAGAAAGACCAAGTGGAAGGTAGGCGATATGCAGGTTATGAAGAGAGAAATCCTGCCATGAATCCTCCCATGTCAATGCAAGGAAGGAGCTTTAATGAGGAGAAAAGGGGGACTGTCAGAGAAATGCACAGTAGGCCTTGGGACAAAGCTAATGAGGTACAAGGTTACCTACCTATGCTTCAACCCAGAGATTCAAGAGCATATTCACACGAAGCGGTTCCAgctaaaaagaagaagaagagcagaTTCTCTGATGCCACCGCAGAGGAAATAGCACACGCACATATGAGACATTCGGATAAATCCACCCTAAAAGAAAAACCAAGAGGACAACAGTTTAGAGCAAATCCTCCGccATTAAATATCCAATACATGGGTTCTGGAAGTACAACCCATCTTAAtccaaaacatgaaaatgttctGGATATACTTAGTGACATCAAGATCGATAATATGGACGAAGCCAGATTTCTTAAAGAAAAGCTGTGCACAGTTTTGAAAGAGTTTCAAGAAAACAAATCCAGAAGTATTGAGGGCCATGCTTCACAATCTGTTGGTGATCATAGAGGGGTAAAGCAGACAAGGGATGATCCAAATGGCATGCATTTAGGAAAGAGAGGTTTCCCAGAAGCCAGACGATATGACGACGGTCCCAGAAGTTTCCAAGAATCCAGACAATATGGAGATGACCCTAGAATGTTTCGAGAGGTCCAACAAATTGGGGATGACCCCAGAGGTCTTAGAGAGACCAGACATTATGAAGGTGATTACAAAGAGTCAAAACGATTTGAGGGTTATCCCAGTGGTCTTCAAGAAGAAAGGCCATATGCCAATGATCATCCAGAGAGGAGACGTTATGATGAAGATCCTAGACAAAAGGaacaacattttgaagaatattcTCGAGCTTCAAGAGCAGAAGCTCCGAGAAATACCCAAGAGACAAGATATTATGAAGATGATTACAGAGGCTTTGGAAATTTGGATCCTCAAAGAAACTGGGAGAATCAGAAGGGACGTTCATTAGAGCGTTTTGAGAACAGAGGCCCAGCAGATGTTGAGAGGGGTTTTCAAGccTCTTTACAAGAAGAAGCAAGGATGTATGCCGGGAGAGCACAGCAGAGGTCTCATCAGAGTGACTGTCACCCTGGAGATGAACCCTACGACCCGTTCAACCCGTCATCCTCTCCCCCTCCAGAAGCGTCCAGCTCCACCAGTCTTGACAAGATCGCATCAACTCTTCTTGAGCTTGTGGCTCGTAGATAAAGTTAGGCTCCTCAGTCAGATTGTTCGTCGTATAAGATAGTTATAGTTTAACAGTAGTCTACAGAGTTTGATCTTTATGTAAATTCATACAAAATTTTCCAGTAAATAACATACTGTTTTCATCTATACATACTGCTTATCCTCTGCAGGGTCACCGAGGGCTGGAGCTTTTCCCAGCATCTCAAggctcccacacacacacacacacacacacacacacacacacacacacactcctcattCATACTGCTTGCAATTACTACCTAATTTCTTACTGCTTTTGGTTTGTTGAGATTTGTAGCCTGCTTGCTACTGTGTTTTCAGATTGGTTTGTGTACTATGAAACTGTAATGGGTTTTGTTTGAATTGTTTAATAAGAAagattattgaaaaataataaaaagttcaacCCAA
>XM_043217693.1
TTTCGAAACATGGCCGATTTGCTGACAGTGTACGACGATGACCAGGCCAACAGCTTCATCGACTGCACGATCTGCGATAAAAGAATACGGGGAGAAACGCATTACAAAATCCACGTGACCACATTACAACATTTAAAGGAGAGATTCTGAGAACACCTCCACTGCCAGAATGGACCGACATAATAGAATATTTGGATTACCTGAATCTTGATGAGCCCATTATTGGTCTCAACTCCCTGATACAGATTCCAGATCATGTCACTGACGATGGCAAAACAGTGTTGAAGTACAAGTGCAGAATGTGTGTCGTGGAGATGGACCTTTACAGCATGGTGGCCCATATTGTAGGACGtaaacacagacaaaaatacTTGGAGCTGAAAAGACCAGACTTGGTGACATGGCAAGACAACAATCAGAAACAGCCAGGTCTTGTGGCCAGAGCTAAAGCTGCTGTAGTTGAAAAGCAGGAGGGATGGGGAAAGCCAGTGGCACTCAAACGACCTCAAGAGAAATTCAGAAATGTCTTCCAAGGAGGAAGCGATTTACGTGCCAGTGTTCATGAACAACCCTACTATGGACAAGAGCCTCTTAGGAAGCCACCTTTCCCTGAACAGGTTCAAAATCAGATGTATTTGGATGAAGAACAGCATGGAAGTTCCTATTATACAGGAGATAATTATGACCAGTGCAGCAGACCTAAAAATCCAACCCACGATGTCCACCAACAATTCTATCCAGAAGAAAACCAACATCAAAAACATTACGAAAATGCTGACGTTCGAGGAAGACACTCACGAGGTGATGGTTATTCGGAAAGAGAAGTGCATACTAGGCCCTATGCAGAACAGGGTGGACGGAGACTGCAAGAATACTATAAAGAAGAAAGTCTTGGCGGAGGACAGTTCTCAGGAGGTAAAATAAACCGATTTAATGACAAAGACCTCAGAATCCGCCCAGGAGCATCAGAATATCAGAAAGACCAAGTGGAAGGTAGGCGATATGCAGGTTATGAAGAGAGAAATCCTGCCATGAATCCTCCCATGTCAATGCAAGGAAGGAGCTTTAATGAGGAGAAAAGGGGGACTGTCAGAGAAATGCACAGTAGGCCTTGGGACAAAGCTAATGAGGTACAAGGTTACCTACCTATGCTTCAACCCAGAGATTCAAGAGCATATTCACACGAAGCGGTTCCAgctaaaaagaagaagaagagcagaTTCTCTGATGCCACCGCAGAGGAAATAGCACACGCACATATGAGACATTCGGATAAATCCACCCTAAAAGAAAAACCAAGAGGACAACAGTTTAGAGCAAATCCTCCGccATTAAATATCCAATACATGGGTTCTGGAAGTACAACCCATCTTAAtccaaaacatgaaaatgttctGGATATACTTAGTGACATCAAGATCGATAATATGGACGAAGCCAGATTTCTTAAAGAAAAGCTGTGCACAGTTTTGAAAGAGTTTCAAGAAAACAAATCCAGAAGTATTGAGGGCCATGCTTCACAATCTGTTGGTGATCATAGAGGGGTAAAGCAGACAAGGGATGATCCAAATGGCATGCATTTAGGAAAGAGAGGTTTCCCAGAAGCCAGACGATATGACGACGGTCCCAGAAGTTTCCAAGAATCCAGACAATATGGAGATGACCCTAGAATGTTTCGAGAGGTCCAACAAATTGGGGATGACCCCAGAGGTCTTAGAGAGACCAGACATTATGAAGGTGATTACAAAGAGTCAAAACGATTTGAGGGTTATCCCAGTGGTCTTCAAGAAGAAAGGCCATATGCCAATGATCATCCAGAGAGGAGACGTTATGATGAAGATCCTAGACAAAAGGaacaacattttgaagaatattcTCGAGCTTCAAGAGCAGAAGCTCCGAGAAATACCCAAGAGACAAGATATTATGAAGATGATTACAGAGGCTTTGGAAATTTGGATCCTCAAAGAAACTGGGAGAATCAGAAGGGACGTTCATTAGAGCGTTTTGAGAACAGAGGCCCAGCAGATGTTGAGAGGGGTTTTCAAGccTCTTTACAAGAAGAAGCAAGGATGTATGCCGGGAGAGCACAGCAGAGGTCTCATCAGAGTGACTGTCACCCTGGAGATGAACCCTACGACCCGTTCAACCCGTCATCCTCTCCCCCTCCAGAAGCGTCCAGCTCCACCAGTCTTGACAAGATCGCATCAACTCTTCTTGAGCTTGTGGCTCGTAGATAAAGTTAGGCTCCTCAGTCAGATTGTTCGTCGTATAAGATAGTTATAGTTTAACAGTAGTCTACAGAGTTTGATCTTTATGTAAATTCATACAAAATTTTCCAGTAAATAACATACTGTTTTCATCTATACATACTGCTTATCCTCTGCAGGGTCACCGAGGGCTGGAGCTTTTCCCAGCATCTCAAggctcccacacacacacacacacacacacacacacacacacacacacactcctcattCATACTGCTTGCAATTACTACCTAATTTCTTACTGCTTTTGGTTTGTTGAGATTTGTAGCCTGCTTGCTACTGTGTTTTCAGATTGGTTTGTGTACTATGAAACTGTAATGGGTTTTGTTTGAATTGTTTAATAAGAAagattattgaaaaataataaaaagttcaacCCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217692.1 True 2874 mRNA 0.43 14 12943474 12952055
XM_043217693.1 False 2654 mRNA 0.43 12 12943828 12952055

Neighbor

gene id symbol gene type direction distance location
tinagl1 tinagl1,LOC107706169,LOC107593537,LOC107669690,LOC107731519,LOC107696600,LOC107591600 coding upstream 81386 12842382 ~ 12862088 (+)
gatad2b gatad2b,LOC107593536,LOC107706168,LOC107731554,LOC107591599,LOC107696601 coding upstream 113675 12793977 ~ 12829799 (+)
si:ch211-57n23.4 si:ch211-57n23.4,LOC108424704,LOC107593575,LOC107670070,LOC107722127,LOC107731740,LOC107665655 coding upstream 182346 12739597 ~ 12761128 (+)
crtc2 LOC107722160,LOC107593533,LOC107669709,LOC107665671,LOC107731562,LOC107591598 coding upstream 206957 12728466 ~ 12736517 (+)
ago2 ago2,LOC107722143,LOC107593532,LOC107591597 coding upstream 217108 12707267 ~ 12726366 (+)
nfyc nfyc,LOC107593541,LOC107696595,LOC107591605,LOC107731465 coding downstream 402 12952457 ~ 12973516 (+)
LOC122324201 kcnq4,LOC107593542,LOC107706174,LOC107591607 coding downstream 28020 12980075 ~ 13021049 (+)
anp32e anp32e,LOC107706176,LOC107669588,LOC107731392,LOC107696590 coding downstream 101702 13053757 ~ 13059310 (+)
pogza NA coding downstream 138708 13090763 ~ 13099037 (+)
si:dkey-166k12.1 si:dkey-166k12.1,LOC107706180,LOC107593577,LOC107670044 coding downstream 152626 13104681 ~ 13114081 (+)
G132498 LOC107593576,LOC107731729,LOC107706171,LOC107696598 non-coding upstream 77879 12786644 ~ 12865595 (+)
LOC122323456 NA non-coding upstream 108949 12831641 ~ 12834525 (+)
G132472 NA non-coding upstream 274920 12667293 ~ 12668554 (+)
G132448 NA non-coding upstream 386272 12556964 ~ 12557202 (+)
G132421 sgce,LOC107722147,LOC107731676,LOC107665667 non-coding upstream 442933 12499142 ~ 12500541 (+)
G132541 psmb4,LOC107593590,LOC107669568,LOC107706179 non-coding downstream 149894 13101949 ~ 13102925 (+)
G132547 LOC107591615,LOC107696587,LOC107731336,LOC107696584,LOC107552275 non-coding downstream 166661 13118716 ~ 13123966 (+)
G132549 NA non-coding downstream 173822 13125877 ~ 13126617 (+)
G132755 klhl43,LOC107706211,LOC107589442,LOC107742826,LOC107696549,LOC107591641 non-coding downstream 559553 13511608 ~ 13512971 (+)
G132754 klhl43,LOC107589442,LOC107706211,LOC107742826,LOC107591641,LOC107696549,LOC108426671 non-coding downstream 560967 13513022 ~ 13513896 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other upstream 518396 12423290 ~ 12425078 (+)
LOC122323774 NA other upstream 830577 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 1419593 11522229 ~ 11523881 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 2525378 10415640 ~ 10418096 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 3189918 9734220 ~ 9753556 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 69362 13021417 ~ 13026026 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 357372 13309427 ~ 13336749 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 1835489 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 1882546 14834601 ~ 14837969 (+)
LOC122323518 LOC107654743,LOC107688368,LOC107602377,LOC108413484,LOC107706254,LOC107710329 other downstream 2126399 15078454 ~ 15192566 (+)

Expression


Co-expression Network