tfpi2 (tfpi2,LOC107722157,LOC107670228,LOC107731825,LOC107667768,LOC107558578)


Basic Information

Item Value
gene id tfpi2
gene name tfpi2,LOC107722157,LOC107670228,LOC107731825,LOC107667768,LOC107558578
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12420878 ~ 12423119 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217873.1
GGAAATGACTAAGTCTAGCCCGCCCTTCCAATTCCACCCCTGCCAAATTCACCATTTATAAGGCAACGATAGTGAGAAGTCAAGTTAGTAGTAACTTATCAGGCGAGTCTTAACAGTTTGTGCCACATCGCCCTCAGTATCCAAACTCTAACACAATGGCATGTGATTTGCGTGGAGGTCTTTTGCTCATTGTTGCCGTCCTGCAAAGCGCCGTCGGACTACAATCCAAAGAAGTTTGCCTGCTGCAAGTCGAAGAAGGAACGTGCAACGACGACATCCAGCGTTATTACTACAATACGATCACCCAGCGGTGCGAAGAGTTCAGCTACAGCGGTTGTGAAGGAAACGCAAACAACTTCAAGTCCTTCATGGAATGTCAGAAAACATGCTTCAGGATTCCAAAAATCCCCCAGATCTGTCGTTTTCAGAAGAAAGAGGGGCCCTGCCGTGGCCTCTTCAAGCGTTATTTCTTCAATATGACCTCTATGCAGTGTGAACCCTTCACTTATGGCGGTTGCCAAGGGAATGAaaacaattttcaaaacctCCAGGAATGCATTGAATATTGCAGACCTTCTAAAAcaaccCCTGTGATTTGCAGCGATATTTTGGACAAAGGAAGGTGCAAAGCTTCCATCCCGAGATATTACTACAACTCTGCTACAAAGACATGTGAGGAGTTCATATACACAGGATGCGGAGGAAGCAACAATAACTTCATCTCCAGACAAAGCTGTATGGATGTTTGTGGTAAAAACGggAGCAAGCATTGGAGTCCCACTAAAAAGTCTGTGAGAGTTTCCAAAGAATACTTAAGACGAGTAAAGTCCCAGCTACCGAAGGAGAAGTCGGCCGAATAATAGTTTACGAACTCATTGGCACTGTATTACTGACAAAGACGATTGCACTGACTTTACAGAATTGGAATTGAAGGCAGCAGTTCATACACATCTCACTCTGTGTATAAATGatattgatttgtattttaaaagatttgtttaataaaaagtttgtttaatattttgtgcatttgtaaaatgcttattgtattttgaataaaatcgaCTGTTATTActtgtattattaaatgcaacattttgtgAAGTCTAACACTGTGATGAAGCAATAAGGTTTAGTCGATGGTATTTAATTTGCTTATGTTTTATACTCAGTATATTTAATGGAATGTTTATTTCACACTGATAGCagatctataaatataaaacaaattgtcTCATGCCTTCAGTggcagaattaaaaaaaaaccaaataaaccTTGAATGCAAGCATTATGAGTCTGCATCatcaaatcag

Function

symbol description
tfpi2 Predicted to enable serine-type endopeptidase inhibitor activity. Acts upstream of or within several processes, including heart development; regulation of hemopoiesis; and sarcomere organization. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in brain; eye; heart; liver; and ovary. Human ortholog(s) of this gene implicated in acute myeloid leukemia and retinal degeneration. Orthologous to human TFPI2 (tissue factor pathway inhibitor 2).

NR:

description
PREDICTED: tissue factor pathway inhibitor 2

GO:

id name namespace
GO:0007417 central nervous system development biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
K23087 TFPI2; tissue factor pathway inhibitor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217873.1 True 1314 mRNA 0.40 5 12420878 12423119

Neighbor

gene id symbol gene type direction distance location
calcr calcr,LOC107669839,LOC107558586,LOC107712922,LOC107667776,LOC107567974 coding downstream 5127 12380444 ~ 12415751 (-)
LOC122323778 LOC107567967,LOC107722131,LOC107670237 coding downstream 221560 12197875 ~ 12199318 (-)
LOC122323777 NA coding downstream 228573 12191038 ~ 12192305 (-)
efcab1 efcab1 coding downstream 229977 12189282 ~ 12190901 (-)
LOC122323775 fam206a,LOC107670282,LOC107556369,LOC107556344,LOC107710376 coding downstream 834807 11584050 ~ 11586071 (-)
sgce sgce,LOC107731676,LOC107722147,LOC107665667,LOC107669779 coding upstream 74109 12497228 ~ 12508605 (-)
pdk4 pdk4,LOC107722149,LOC107669734,LOC107591595 coding upstream 135792 12558911 ~ 12568503 (-)
LOC122323727 slc25a13,LOC107665658,LOC107593530,LOC107731765 coding upstream 196664 12619783 ~ 12657157 (-)
dlx5a dlx5,dlx5a,LOC107670186,LOC107591663,LOC107665662,LOC107736572 coding upstream 280473 12703592 ~ 12705647 (-)
chrac1 chrac1,LOC107580926,LOC107591666,LOC107669723,LOC107722130 coding upstream 303393 12726512 ~ 12727814 (-)
G132398 NA non-coding downstream 41727 12333451 ~ 12379151 (-)
G132363 NA non-coding downstream 171455 12248381 ~ 12249423 (-)
G132355 NA non-coding downstream 239511 12178945 ~ 12181367 (-)
G132353 LOC107722138,LOC107566772 non-coding downstream 243472 12174563 ~ 12177406 (-)
LOC122323784 NA non-coding downstream 250030 12162615 ~ 12170848 (-)
G132417 NA non-coding upstream 29165 12452284 ~ 12452705 (-)
G132428 NA non-coding upstream 45801 12468920 ~ 12471830 (-)
G132429 NA non-coding upstream 60497 12483616 ~ 12484168 (-)
G132436 NA non-coding upstream 87867 12510986 ~ 12511332 (-)
G132437 ppp1r9a,LOC107722146,LOC107669756,LOC107731638 non-coding upstream 89998 12513117 ~ 12525593 (-)
G132292 NA other downstream 587971 11832173 ~ 11832907 (-)
LOC122323871 ctnnal1,LOC107724361,LOC107670281,LOC107653856,LOC107710384 other downstream 664440 11709923 ~ 11756438 (-)
G132219 LOC105418166,LOC101068103,LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 1249965 11170270 ~ 11170913 (-)
trappc3 trappc3,LOC107653823,LOC107565048,LOC107564495 other downstream 1675749 10740374 ~ 10745129 (-)
ctnnal1 NA other downstream 2058351 10315621 ~ 10362527 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other upstream 12660 12435779 ~ 12438085 (-)
sem1 NA other upstream 174655 12597774 ~ 12669215 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other upstream 604698 13027817 ~ 13029349 (-)
G132733 NA other upstream 861412 13284531 ~ 13285461 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other upstream 1071711 13494830 ~ 13502370 (-)

Expression


Co-expression Network