LOC122323775 (fam206a,LOC107670282,LOC107556369,LOC107556344,LOC107710376)


Basic Information

Item Value
gene id LOC122323775
gene name fam206a,LOC107670282,LOC107556369,LOC107556344,LOC107710376
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 11584050 ~ 11586071 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217879.1
actTGATTTGTCTTCCGGCGTCAAACATCACTGTTTATATGTGATCAGATTATCAGCCTctccaaaaaaattaattgctgtGGTGGATGCCGACATGGAAGATAGTGAAAAGAAAGCCCCATCAGTAATCGATCGTTATTTCACCCGCTGGTATAAAACTGATCTGAAAGGAAAAGCATGTGAGGATCACTGCATTCTACAGCACTCCAACAGGATATGCGTCATCACACTCGCAGAGTCTCATCCTATCCTTCAGAATGGACggaaaatcaaaaatataaactacCAGATCAGCGATGGATGCAGTCGTCTGAAGAACAAGGTGTCTGGAAAGTCAAAGCGAGGCGGTCAGTTCCTGACAGAGTTTGCGCCACTGTGTAGAATAACATGTACAGATGAACAGGAATACACCATATTCAGCTGTATCAGAGGACGTCTTCTAGAAGTAAATGAAGCCATATTGAACAAGCTAGACCTGTTATCGGAAAAGCCTTCCACAGAGGGATACATTGCCGTTATACTACCCAAATTTGAAGAGAGTAAGAGTATCACTGAAGGCCTTCTGACCAGAGAACAATATGAGGAGGTTCTGACTAAAAGAAACCAACAAGAAGAGCCTTGCTGAGATCAACTTGCGCTTTGGAGCTGCCGAATGACTGCCGAGTCTGCTTTAAGGAATAATTACTTCAAGCTGGTAGAAACATGAGTGGCAGCATGAATGTGTGCCActcacacattaaaaaaaaaaaaaaaaaaaaaaacatcttgaggAAATTTTGAAGGAATGAAGACTTGTCTGCTGGATCCAGAGGAGTCTTGGATTTGACTGGAGTGCATTTTGTTGGACCACTAGTATAACAATGCCagtgttatgtttttttgagtgtgtttaTTGTTTCATTAAGAAGTTTCCTAATTTGAGAAGTAAAAGATCTGTGTCCTCgcagaaacattattttccgTCTGGTTGCTATAAAACTGCTTATAGCCCTGATGCTAAATAAAGGAACTCGTCCCTTCTGAG

Function

NR:

description
PREDICTED: protein Simiate-like

GO:

id name namespace
GO:0006546 glycine catabolic process biological_process
GO:0005960 glycine cleavage complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217879.1 True 1024 mRNA 0.41 6 11584050 11586071

Neighbor

gene id symbol gene type direction distance location
LOC122323869 NA coding downstream 87437 11490127 ~ 11496613 (-)
csmd2 csmd2,LOC107698986,LOC107663732 coding downstream 465769 10876437 ~ 11118281 (-)
col8a2 col8a2,LOC107564494,LOC107710560,LOC107724334,LOC107565043 coding downstream 856043 10637428 ~ 10728007 (-)
ptp4a2b LOC107564493,LOC107670276,LOC107653869,LOC105012508,LOC103042327,LOC108257240,LOC107710550 coding downstream 947159 10617563 ~ 10636891 (-)
anln LOC107724311,LOC107670283 coding downstream 968041 10604697 ~ 10616009 (-)
efcab1 efcab1 coding upstream 603211 12189282 ~ 12190901 (-)
LOC122323777 NA coding upstream 604967 12191038 ~ 12192305 (-)
LOC122323778 LOC107567967,LOC107722131,LOC107670237 coding upstream 611804 12197875 ~ 12199318 (-)
calcr calcr,LOC107669839,LOC107558586,LOC107712922,LOC107667776,LOC107567974 coding upstream 794373 12380444 ~ 12415751 (-)
tfpi2 tfpi2,LOC107722157,LOC107670228,LOC107731825,LOC107667768,LOC107558578 coding upstream 834807 12420878 ~ 12423119 (-)
G132241 LOC107726138,LOC107664713,LOC107563276,LOC107555946,LOC107698981 non-coding downstream 18420 11508717 ~ 11565630 (-)
G132245 NA non-coding downstream 64771 11517185 ~ 11519279 (-)
LOC122323791 NA non-coding downstream 68592 11513131 ~ 11515458 (-)
G132231 NA non-coding downstream 96061 11484803 ~ 11487989 (-)
LOC122323785 NA non-coding downstream 408430 11171026 ~ 11175620 (-)
LOC122323787 elp2,LOC107556355,LOC107670280,LOC107724330,LOC107556343,LOC107653855 non-coding upstream 119015 11705086 ~ 11706272 (-)
G132281 NA non-coding upstream 122853 11708924 ~ 11709875 (-)
G132283 NA non-coding upstream 141692 11727763 ~ 11785289 (-)
G132290 NA non-coding upstream 244276 11830347 ~ 11830796 (-)
G132293 NA non-coding upstream 252465 11838536 ~ 11839034 (-)
G132219 LOC105418166,LOC101068103,LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 413137 11170270 ~ 11170913 (-)
trappc3 trappc3,LOC107653823,LOC107565048,LOC107564495 other downstream 838921 10740374 ~ 10745129 (-)
ctnnal1 NA other downstream 1221523 10315621 ~ 10362527 (-)
elp2 elp2,LOC107556343,LOC107670280,LOC107724330,LOC107653855,LOC107710621,LOC107556355 other downstream 1272114 10291272 ~ 10311936 (-)
elmo1 elmo1,LOC107710279,LOC107556397,LOC107702083,LOC107724338,LOC107556334,LOC107653845 other downstream 1599745 9929866 ~ 9984305 (-)
LOC122323871 ctnnal1,LOC107724361,LOC107670281,LOC107653856,LOC107710384 other upstream 123852 11709923 ~ 11756438 (-)
G132292 NA other upstream 246102 11832173 ~ 11832907 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other upstream 849708 12435779 ~ 12438085 (-)
sem1 NA other upstream 1011703 12597774 ~ 12669215 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other upstream 1441746 13027817 ~ 13029349 (-)

Expression


Co-expression Network