LOC122323838 (npr1a,LOC107694365,LOC107754786,LOC107731544,LOC107677481,LOC107595610,LOC107584346)


Basic Information

Item Value
gene id LOC122323838
gene name npr1a,LOC107694365,LOC107754786,LOC107731544,LOC107677481,LOC107595610,LOC107584346
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5811984 ~ 5836378 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217941.1
CTCTCTCAGTTCTCTCCTCCTCCCACCTTGAAGCGCCAGCTTCACGGCGCTTTGACTGACCCAACACTCATTGGATGAGCTTGAGAGGAGAACAGCCTTTAAGGATAGACCGTGCATCCCATCAACCCCGCTCTTTTCATtctgtgcaataaaaaaagttgcgTTTCGTAGATGCAAACGTGAACGCGGTTTTTACTCTGACCGCACTTTTTTGTTGCGACATCGCGCGCATTCTGAATCAAATCTACACCCGAGAATATTTGCCCGTCTTCTCCAGTCGGGACAAGAGCAAGAAGAGGACAGTTTTTTTAACCAAAGAAGCCTCAATACTCATTAACAAAGTTTCCAAGAAATCCACATGCGCACCAGGAAAGGGACAGATTTCCTCTCCGCGAATCCCGTTTCCTCAGCACATTCAGAGAAACAGGGGAGCTTGAGAAATCATGCTGATTTCTGTGCGGAGGGACACCACACTGAAGTTTCACTCCTGTAAGTTGGATGAGTGGGtttaagctttaaaaatcaACGTGTACCCTGAGAGTTTTGCCGCCGCGTTCACGAGGCACGGATTTTAATTTACAGAGCAAGGCAAGAACCGCAGAGGGATCATGACACCAAATGACGACCTGATCTGTGAGTCTTAGTTCTTCCCATCCATTTTGACAATGGAAGCGTTCCAGATGGGGCCGCTGAGGCTCACTCTTCTAGTCCTGCTGAGCGGTGTGTCTTTCGGAGTGGTTGAACTGGAGCCCCTCGCTCAAAACCGGCCTCAGTCCCTCAGTCCCCATCCGCCTCAACAGAACATCACCCTGGCGGTCATCCTGCCTCAACACAACACCGAGTACCCCTGGGCATGGCCCCGGGTCGGCCCCGCCTTGAACTGGGCCCTAGAAAAGGTGAACTCCGACCCCAACCTGCTGCCAGGCTACCATCTACAACTGGTTTTCAACAGCAGCGAAAACAAGGAAGGAGTGTGTTCGGATTCAGTAGCTCCTCTCGTGGCCGTGGACCTGAAGTTCTCGTACAACCCCTGGGCTTTCATCGGGCCGGGATGTGACTACCCGGCCTCACCGGTGGCCCGTTTCACCACGCACTGGGAGGTTCCGATGATCACGGGTGGAGCGAGAGCGCTGGGTTTCAATTTGTACTCGTCCATCACCAACATCGGCCCCACGCACAAGAAGCTGGGCGAGTTTGTGGTCAGGATGCACCGGCATTTCGGGTGGCACAAACACGCCCTGCTCATGTTCAGCGATAATAAGAACGACGACCGGCCGTGCTACTTTGCCGTGGAGGGGCCGTACTCACAGATGCGTGAGGACAACATCACGGCAGATGACATGGTGTTTAACGAGGATGATGAACCCGTCCGTTATGAAGTGCTTCTCCGGGAAATCAGCCAGAAAGCCCGTGTTGTGTACATCTGCTGCAAGTGGGACACGTTTCGGAAGCTGATGGTGGAGTTCTTGAGGTTGGGTCTTCCTCAGGAGGAGTACGCCTTCTTCTTCATCGATCTGTTTGGATATAGTCTGCAGAGACACCCCGCCAAACCATGGGCACGTGGAGATGCTGATGACGCTGCAGCCAAGGAGGCATTTAAAAGCGTGAAGATCCTGACCTACAGAGAGCCTCAGAACCCAGAGTACAAGGACTTTGTGTCCAAAATGAAGACAGATGCCATGGACGTATATAACTTCAGCGTGGAAGACTCCCTGATGAATCTGATTTCTGGCTCATTCCACGATGGAGTCATGCTGTATTCTCATGCCCTGAACGAGACTCTGGATCAGTCGGGTGCGAGGCCCCCAGGGGACGTTATCAATAAGAAGATGTGGAATCACACATACTATGGAACATTAGAAAAGTACCGGCAGGTGTGTCGGATTAAAGTCAGAAGCTCCCCACATCCTGAGACGAAGAGAAGAGCTGATGaatatgcaaagaaaagaaaaagcaagctGAAAAGTTGA

Function

symbol description
npr1a Predicted to enable guanylate cyclase activity; natriuretic peptide receptor activity; and peptide hormone binding activity. Acts upstream of or within axon guidance and cardiac muscle cell proliferation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including brain; eye; heart; integument; and kidney. Human ortholog(s) of this gene implicated in Miura type epiphyseal chondrodysplasia; acromesomelic dysplasia, Maroteaux type; essential hypertension; and myocardial infarction. Orthologous to several human genes including NPR1 (natriuretic peptide receptor 1).

NR:

description
PREDICTED: atrial natriuretic peptide receptor 1-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0006468 protein phosphorylation biological_process
GO:0006182 cGMP biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004383 guanylate cyclase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217941.1 True 1970 mRNA 0.52 6 5811984 5836378

Neighbor

gene id symbol gene type direction distance location
LOC122323412 c1galt1,si:dkey-202e17.1,LOC107702589,LOC107568284,LOC107754798,LOC107731548 coding downstream 67407 5739319 ~ 5744577 (-)
umad1 si:dkey-119m17.2,umad1,LOC107598207,LOC107568281 coding downstream 95697 5706149 ~ 5716287 (-)
glcci1a glcci1,LOC107702447,LOC107731573 coding downstream 106674 5675485 ~ 5705310 (-)
rims3 rims3,LOC107672861,LOC107598211,LOC107702460,LOC107571463,LOC107731575 coding downstream 141613 5614268 ~ 5670371 (-)
ptp4a3a ptp4a3,LOC107702466,LOC107571462,LOC107598212,LOC107731571,LOC107738588,LOC108272580,LOC103031245 coding downstream 202125 5586537 ~ 5609859 (-)
asns asns,LOC107754811,LOC107731557,LOC107702657,LOC107672863 coding upstream 87247 5923625 ~ 5932827 (-)
bloc1s4 bloc1s4,LOC107672822,LOC107568287,LOC107702415,LOC107731556,LOC107598233 coding upstream 97254 5933632 ~ 5938584 (-)
pard6gb pard6gb,LOC107672872,LOC107754812,LOC107702404,LOC107731577 coding upstream 103072 5939450 ~ 5970571 (-)
dtnbp1b dtnbp1b,LOC107568291,LOC107754801,LOC107731565,LOC107694327,LOC107598220 coding upstream 327445 6163823 ~ 6192690 (-)
csnk2b csnk2b,LOC102207154,LOC106594067,LOC101175345,LOC100710962,LOC106573472 coding upstream 554439 6390817 ~ 6395006 (-)
G130880 NA non-coding downstream 137106 5674554 ~ 5674878 (-)
G130827 NA non-coding downstream 289018 5520939 ~ 5522966 (-)
G130804 NA non-coding downstream 371119 5440426 ~ 5440865 (-)
G130801 NA non-coding downstream 378055 5433562 ~ 5433929 (-)
G130764 NA non-coding downstream 458722 5345595 ~ 5353262 (-)
LOC122324223 NA non-coding upstream 2415 5838793 ~ 5847759 (-)
G130955 NA non-coding upstream 270761 6107139 ~ 6162535 (-)
G130969 jarid2,LOC107568290,LOC107702394,LOC107754814,LOC107694367,LOC107731546 non-coding upstream 316661 6153039 ~ 6155564 (-)
G130973 NA non-coding upstream 361747 6198125 ~ 6198361 (-)
G130978 NA non-coding upstream 397666 6234044 ~ 6236277 (-)
LOC122324254 NA other downstream 406348 5404516 ~ 5405636 (-)
G130744 sema4ab,LOC107702572,LOC107672813,LOC107598230,LOC107731578,LOC107705066 other downstream 551820 5141505 ~ 5260164 (-)
G130763 NA other downstream 559795 5245353 ~ 5252189 (-)
LOC122323502 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other downstream 589101 5087244 ~ 5222883 (-)
G130696 NA other downstream 870152 4743572 ~ 4941832 (-)
G131006 LOC107754818,LOC107731580 other upstream 525969 6362347 ~ 6363172 (-)
sh3bp5lb sh3bp5lb,LOC107711328,LOC107677461,LOC107694325,LOC107754828,LOC107584304,LOC108435520 other upstream 791220 6627598 ~ 6639220 (-)
polr1h znrd1,LOC107584303,LOC107754832,LOC107677479,LOC107694346,LOC107595594 other upstream 812012 6648390 ~ 6649389 (-)
srd5a1 srd5a1,LOC107691541,LOC107711310,LOC107595623,LOC107694335 other upstream 1013991 6850369 ~ 6858660 (-)
LOC122323893 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other upstream 1520243 7356621 ~ 7360143 (-)

Expression


Co-expression Network