trib1 (trib1,LOC107565192,LOC107724318,LOC107702074,LOC107710180,LOC107556392,LOC107653840)


Basic Information

Item Value
gene id trib1
gene name trib1,LOC107565192,LOC107724318,LOC107702074,LOC107710180,LOC107556392,LOC107653840
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 9631241 ~ 9638982 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217982.1
GCATCAGTAGTTCAGTGAGTCAGACAGCCCTTCTCTCGGGCTCAGATCTACACCGGGAATATTTTACACCACACAGCCGCCTCGCACAGTATCTCCTGGACTTCAATGTTGTCCACAAAGCTCAAACGGACtaactaatgcaaaaaaaactgaaaaacaatggATAAGCGAAACTGCAAACCTTTTATACACACTTTCGTTTCATATTCATTGACGAGTAAgtaggatctttttttttttcctttttgcagcGCGGTGCACAGACCCTTTCCTGGAATATGCTTGCTTGAAATCGGCCCGATTATATCAGTTTCAACTACTGCAGTTTGTAAGAATGAGCGTGCAGTGGCTTCAGAATCCGGTACCGGGAAGACACGGACACAAGCGCTTTGACACAGACGAGCCTGTGACCAGATGCCCGCGGCTCAGCGAGTCCTCGGCTGATGCGGGTCTCCTGGGCTCCTCACCGGGATCCCCGTTAACCGGAGCGCCTCTGAGCCTCACTTCAGCCCACCAGGGTCCCGCTCGAATCGGCCAGTTCCTGCTCGTGCCCCTGACCGACCGACCGGGGGTGCACAGCGCTTTGGACATGGACACGGGAGAGGAACTGCTCTGCAAGGTGTTTGATATGGGCCATTACCAGGAGAAAATAAGAGCCTACAGCATGCTGTCAAGTCATAAGAACATTGCACTGATCAAAGACATAGTTCTTGGGGAGTGCAAGGCGTATGTGTTCCAAGAGAAGGATTTTGGCGACATGCACACCTTCGTAAAGAGCAGCAAGAGGCTTCCCGAAGACCTGGCTTCCAAGCTTTTCTACCAAGTGGTGTCTGCAGTGAACCACTGTCACCAGGCTGGCGTCGTTTTGGGAGACCTCAAGCTCCGCAAGTTTGTGTTCTCAGACGAGAAAAGgACCCAACTGAAATTAGAGGGTCTGGAGGACTGCCATATCCTGTGCGGAGAGGACGACTCGATGTACGACACGCACGGCTGCCCTGCATACGTGAGTCCCGAGATCCTGAACGGCGGAGGGTGTTACTCGGGCAAGCATGCGGACGCGTGGAGCCTCGGCGTCATGCTGTACACCATGCTCGTGGGCCGCTACCCTTTCCACGACCCGGACCCCGCAACTCTGTTCTCCAAGATTCGCCGGGGCACGTACTGCCTCCCCGACGGGCTGTCTTTAAGGGCGCGCTGCCTACTCCGCAGTCTGCTCAGAAAGGACCCCGGCGAGAGACTGACCGCAGCCGAGGTCCTCATTCACCCGTGGTTCGATGGCAACACGCAGGACCCGGCAAGCGCAGAACAGCAAGCCAACCTCAGAGAACAGACAGTGCCCCAGATAGAAATGGAGCAGGATGAGGATCTTTTCTCCTGAGGAAACCGATATAGCTTGAATACGGACCAAAACCGTTGGTTACCTTGGTGTTtcgtttttttatcatttggtTTCTTATATGGATTTTGTAATAGATTCAGAAGTATACACTCGGTGAATACTCACTCAAAGTACTGTAACGTCTGTGTCAGGTTTAAGGACGGTGTGCACAACAGCCGGTGCATTTTGAAGTCGTTTGCTGGCGAACCGTTCTTGTGCTGTATGAAGTGAACGGGGCCGGGCATTATGGGTCACGTGAGAATTAGAGAATGTGAGAACTAACCTCGGCCTAAGAGCCAGACCTGTGGTTGTCCACAAGAAAAAAACGATGTAAGTTGACTCACCAGGCGCATGTCTTTTAATGGGAGGGGAATGAAAGCCAGAAGAATCTTGACACATACGTACATACGTATGGAGGACTTGAAGTGCAGCCTAAAAAATACAGCGAAGAAACAATTATCagttcatttgataaaaaataataataattattacaaatgaaacaGCTTGACTTGAAGAATAAAGACtgtcttttgagagacaatatctttatatgcaattttaaaactttgcaggatgttttcattcacttagagctatgttaaacactttaaatatagCAATAGACAACtcatttataaatagtttttaaatgcaaagttgTTTCGTCTAAAGCGTTTAAAGCAACAGCTAATtgcttttctttattcttttattttttacacatcgGCCACCGTTGCGCATCAAGGGGTGTGCATCCTAAAATTATGCCAAAAGCTACCTATTATGAACTATccaattatattttcaaaagaataaGCAAAACAATTGGCAAATGTCTTAAAGTATTAAAGTtgaattatttatgttaataattaaaagtaatatttggTTTcctacatttataattaaaaaaataccagTAATTAAgtctatatttgttttgtttttataaatgaaattggTAATTGAATTCTTCACTTAATTGTTTAAGTGGCACTTGGTCTTACATGCTATAAGCTATTTTAAACCACACACACTGTGTGCTGTTCGGACTTAAGCCTCTCAGAATTGCCAAACTGTACATAAGAGCCATTCAAAGGTCAAATGTCACTCATTGACCTTTAAGACTCTGTGACAACCAAGGGATCACCGTTACAAACAGATTCTTAAATGTTCAGGATGAGCTTCTTACAGACTGATAcaaagtgttcattttttttctgctgtatcCTGATCTCTCTAGTTTTTCTAGTCACAGTTTCCTTACTTGAATCCAAGCAACCTCGTAAAAGCGCGAGGCTTCAGTATGGCAGGCCAGTTCATACTGCGGGTAAGATATAATATGACTCAACAGCTGGGCGTTGGTGTATCGAAGAGGAAAGGGCTATGAACCCAGATTAGTGCGCTCAGTGTGACTACATATATCTGTGtagctttactttcactttaaaGAGAGGAGAACAGTACTACGGCAGCACTACCGTAAGGGTAGAGCGTCCTATACAGGTCTGTTTTCCGCTTGCCCTTGCGTTGGGGGTTGTATGTTACCTCTGAATCCGTGCATAATGGTGATACGCGACGTTTATGGTTTTCGAAAGGCTCTTTATGAGCGAAGGCCGGAGGGTATGCAAAATGCCTGTCTCATGCATGCAACACATGGGGAAAGCTGACACGAGTGCACAGAGTTCATATTGCACTGTGAATTATGTATTTGTGACACAAACCTCAAGGCTTGACCACAAGGGTTTAACGGTTGAAATTCATTGTACAAATGagcatttgtaaatatgtacatCTTAAGTGTGtgaacaaaactgaataaaGATTACTCTTTCTTATTTA

Function

symbol description
trib1 Predicted to enable mitogen-activated protein kinase kinase binding activity. Acts upstream of or within liver development. Predicted to be active in nucleus. Orthologous to human TRIB1 (tribbles pseudokinase 1).

NR:

description
PREDICTED: tribbles homolog 1-like

GO: NA

KEGG:

id description
K08814 TRIB1_2; tribbles homolog 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217982.1 True 3223 mRNA 0.45 3 9631241 9638982

Neighbor

gene id symbol gene type direction distance location
klhl38a klhl38a,LOC107724354,LOC107565193,LOC107702087,LOC107556389,LOC103030765,LOC108424967,LOC108272409,LOC105907674 coding downstream 46468 9579575 ~ 9584773 (-)
azin1b azin1b,LOC107724288,LOC107702092,LOC107565195,LOC107710131,LOC107653834 coding downstream 103254 9521341 ~ 9527987 (-)
rrm2b rrm2b,LOC107556385,LOC107702093,LOC107724293,LOC107565196,LOC108425040 coding downstream 110102 9516444 ~ 9521139 (-)
mtdha mtdh coding downstream 116223 9507489 ~ 9515018 (-)
laptm4b laptm4b,LOC107724295,LOC107702097,LOC107565197,LOC107556382 coding downstream 126203 9495622 ~ 9505038 (-)
lrrc69 LOC107724328,LOC107556328,LOC107653817,LOC107702067 coding upstream 270122 9909104 ~ 9911742 (-)
otud6b otud6b,LOC107556329,LOC107724319,LOC107702071,LOC107653818,LOC107556366 coding upstream 273383 9912365 ~ 9915059 (-)
rp9 rp9,LOC107556335,LOC107670274,LOC107724340,LOC107653847,LOC107710715,LOC107556368 coding upstream 368059 10007041 ~ 10011759 (-)
c19h18orf21 LOC107670294,LOC107724369,LOC107653848,LOC107710313,LOC107556336 coding upstream 373426 10012408 ~ 10025651 (-)
sla1a LOC107724327,LOC107556331,LOC107670275,LOC107653820,LOC107556370,LOC107710725 coding upstream 735729 10374711 ~ 10378838 (-)
G131899 NA non-coding downstream 39385 9591326 ~ 9591856 (-)
G131896 NA non-coding downstream 59855 9569070 ~ 9571386 (-)
LOC122323628 NA non-coding downstream 75873 9553543 ~ 9555368 (-)
G131882 NA non-coding downstream 136587 9492413 ~ 9494654 (-)
G131852 NA non-coding downstream 362093 9260334 ~ 9269148 (-)
G131910 NA non-coding upstream 8567 9647549 ~ 9648024 (-)
LOC122323520 NA non-coding upstream 134329 9773311 ~ 9774463 (-)
G131944 runx1t1,LOC107702085,LOC107556395 non-coding upstream 238470 9877452 ~ 9890523 (-)
LOC122323594 NA non-coding upstream 303154 9942136 ~ 9945714 (-)
G132128 NA non-coding upstream 559591 10198573 ~ 10255238 (-)
G131861 stk3,LOC107724280,LOC107653827,LOC107710087,LOC107702102,LOC107556381 other downstream 321889 9308720 ~ 9309352 (-)
hey1 hey1,LOC107584259,LOC107702120,LOC107555572,LOC107696214 other downstream 844512 8724506 ~ 8786729 (-)
si:dkeyp-120h9.1 si:dkeyp-120h9.1,LOC107702119,LOC107584261,LOC107724282,LOC107743828,LOC107696212,LOC107555569 other downstream 892455 8727259 ~ 8738786 (-)
tdp2b tdp2,LOC107743833,LOC107696206,LOC107555562 other downstream 971755 8654498 ~ 8659486 (-)
trit1 trit1,LOC107691527,LOC107687082,LOC107709271,LOC107562762,LOC107724344 other downstream 1310340 8287145 ~ 8320901 (-)
cibar1 fam92a1,LOC107710198,LOC107653841,LOC107556364,LOC107702073,LOC107724322 other upstream 20374 9659356 ~ 9664459 (-)
elmo1 elmo1,LOC107710279,LOC107556397,LOC107702083,LOC107724338,LOC107556334,LOC107653845 other upstream 290884 9929866 ~ 9984305 (-)
elp2 elp2,LOC107556343,LOC107670280,LOC107724330,LOC107653855,LOC107710621,LOC107556355 other upstream 652290 10291272 ~ 10311936 (-)
ctnnal1 NA other upstream 676639 10315621 ~ 10362527 (-)
trappc3 trappc3,LOC107653823,LOC107565048,LOC107564495 other upstream 1101392 10740374 ~ 10745129 (-)

Expression


Co-expression Network