mc5ra (mc5ra,LOC107746932,LOC107552309,LOC107675655,LOC107754914,LOC107566557)


Basic Information

Item Value
gene id mc5ra
gene name mc5ra,LOC107746932,LOC107552309,LOC107675655,LOC107754914,LOC107566557
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4244693 ~ 4267138 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218104.1
ACGAGAGATTTTGAAAATGGATAAATGATTATCGTCGAAATGATTGTCTCTTAcagtctctctctatctctctctctctctatatatatatatattgtgagaGACACAGTCAAAGACAAACGGCCAATCACTTTTAATCACGAAATGGAACCTATATTTTAGCTTAAACCAATACATTGATATACTATATAATTTCATCTGAAGAGCATATGCAGTCATTTGTAAAGTGTATAATGTTGCGTTTCTCTTAGAGACGAAGAGATTAATCAGATCCAAAGGAAATGGAGGTTATTGATGGAGGAAATTGTCTGTCTGCCCTAGGGACCACTAAAAATAACTTCACCAGTGCCTCGGAAAACATAAAGAGAGCTTTGAACTAAGCTATTGTCATTAACTCTGCCTCTTTCTTTTAAAGTATAACAAAGACCGTATAGCATGCCATCTCTAAAGGGAAGAAGTTCTGTAGAGTATTAAAACGTAAAGCCATCAGGCGGGAAAACGTATACGAAGAGcacaaaaaacagtcaaacaaaaataaatactcgTCACGAAGAAACTTGTTTAACCAAATCGTAAAATGTTCAACTGTGGCTGATCTGGGGAGGTTTTTCCAAGGAATGAAACTCTAAAAAGACTTATTTATCCATCCATGATGACTTCAAAAGAACAAGCTTGTGACTTCCATCACAAGTTTTTCATTAGCTGACAGCCTGTTGAGAAACATATTCACAGTTTACATTTACTGTTATgcatataagtatatataaccAAAGAGACGGCCCTTGTTTTTCAGCTTCCCTAATCAGTAATTGTCTCCCACAGTTATGCAGGATTTATTGAAATTTGTTCAGGCCGTGGTAACAGAGATCACCCTGATACTGCCTTCTCAATGCACTTTTTGTTCCCGTTTATAAAAAAACAGTCATGGGTTCAGTTTGAGCGTATTTCTCACATGTTGATCCTGATGCTGAGCTGTCATTCTCAGATTTATCTGGATGACCTAAAATAGTCCTATCCTAAAATAAACCCGGAAAATTTCAAGAATTGATGCAGGAATTTCGAGACAAAAAGAAACCATGTCACGTTACATAAACTAGCATCACAGGTGCCCATCCTTCTCTACACATTATAACAAATGTGGCTGTTAGAAATATATCCTTATAACCTAGCTTAATGTGAAATTAATACATAAGCCATATGTAGGTTTTGAAGACTGTACATGCAGTCAGCAAGAAAAGGCCGCGTCCGCTTTGGAAGGCtgtgactgaaataaaaagtttaaaatttaaGAACATGAATGCTCAGCAAtgaatgctctgcagtgaatgggtgccgtcagaatgagagtccaaacaactgaTCAAATCATCAAAATCATCCAAAAGTGATCCACCCCCCTCCAGTCCAGTCCATCAGTTGACATCTTCTGAAGCAAACAGCTGCACGATTGTCCGAAACTACTATCTATAatccattctgacggcacccattcaccgtaGAGGATCAATTGgagagcaagtgatgcaatgttGAATTTCTCTATatctgttcccatgaagaaacaaactcgtctCCTGCTCAGAAGGCCCGACGGTaagaatattttcatatttagtaGAACCACCCCTTTAAATTCTGCCAGCTATATCATGTctgcacaattaatttttcatattcTTGTATTCCCCATATTGCAacttgcaaacaaaaacaatgataGATGATGGCGATTactgttatttataatataattcttttttggtaacactttctatgaagcctgtatttataatacattataagggtatACTTAACGCATTATAATACAtgtcatattcatattcataagaacagttttaaGGTGTTATAATTTTTCACTCATTTATGGTTGTAGCTTTTCAGAGTATGATCATTTATAACACACGGCGAACGTGATTCATCCCCTTACGTTACAGTggattatatttttcatatttataagtCTTTATGAGCATTATATTGTGccattttatttgttagtttacTTAAAGTACACAAATACCACTTatatgtagtaataataacaataatacattaataatagcaataagATCATACATCAAATCAGATGAATcagattattttataatatcagtttgattattttgatgataCCCTGCAAACTACAACAAGCCTTCATTAGTGTGCCGCTAAATACATGCTAACgctttattttgcacttttttttacttcacaagtaTGAGAACTTTCTACCCACCCTATaaagtctacttatactctcaGGTCTATataataaacagcatttctttcagttgaaagtaCGAGCTAGCTCACATTAGCCTCAGTATTAGCCTCACAGGAAGCAGTTAGCCGCTCACGAGATGTTGCAAGATACTgtgcaaatatgaaataaacaaggTCAAGATATGATACAGTCCTTTATAAATGAAGCAGATTTAATATGGTGTTCactgtgtgttataaataatcacACTCTTAAAAGTTACAATCAGAAATAGTTAAATGTTATAATGCGTTACAACCGTCttcatgattatttttaatataatgcatcatgcattcattataacgccccttataatgtattataaatgcacGCTTCGTAAAAAACGTTGCTTTTTTATCACTCAACTTATCCTTATTGCAATGATGTGCCACGAGcaataaagaaatgcaaacTGATCGTCGATTACGTTGAACGCAAAGGCTCTTTTCTGCAAAGTTGCAAGCATTCCGTTCGCGCAACATGTCAGACAGACTCGGAGTCTGATTCCTGCGGCGTGAGGATGCTCTGAAAGCTTCAGAAGCTCTGGAGGTGGAGCTGTGGCCGTCCCCGATCCTATATATGCATCCGATGCAGCAGAGCCCCTTTCTTCACAGAGATCTTCAAAAAGCCCTGGACTGAAAGAAGCGCACAGCCTTTGAGATCCTTAGCAGGTTTACGTCGAGACAACTCCCGCTCCGAACAGGTTAAAGATGCCCAACCCACCAACCCAGTGACTCTAAGAAAAGCCTACAACACTCTCAATGAATCCCTCGTCCACGATGAACACTTCCGAGGCCACCCTGTCCCTTTGGGCCATCCACGTCAACTCCAGTGCCGTTTCATACCTCCTCAACGCCACCGAGACCCCATCCCACGGCAAGTCCAAAGCATGCGAGCAGCTCAACATCGCCACCGAGGTGTTCCTCATCCTCGGCATTGTCAGTCTGCTGGAGAACATCCTGGTCATCTGCGCCatagtgaaaaacaaaaacctccACTCGCCCATGTACTTCTTCGTCTGCAGTCTGGCCGTGGCCGACATGCTAGTAAGCGTCTCTAACGCTTGGGAGACCATCGTCATCTACTTACTCACCAACCGCCAGCTGGTGGTGGAGGACCATTTCATCAGACAGATGGACAACGTTTTTGACTCTATGATCTGCATCTCCGTGGTGGCGTCCATGTGTAGTCTTCTAGCTATCGCCGTTGACCGTTATGTCACAATTTTTTACGCTTTAAGATATCACAACATTATGACGGTGCGCCGGGCCGCACTCATCATCGGTGGGATTTGGACGTTCTGCACAGGCTGCGGAATCGTCTTCATTATCTACTCCGACAATACCTCTGTCATTGTGTGCTTGGTTTCCATGTTCTTCATCATGCTCGCGCTCATGGCCTCCCTCTACAGCCACATGTTCATGCTGGCGCGATCTCACGTAAAGCGAATCGCCGCCCTGCCGGGCTACAACTCCATCCACCAGAGAGCCAGCATGAAGGCGGCCGTCACCCTGACCATCCTTCTGGGGATCTTCATCGTCTGCTGGGCTCCGTTCTTTCTCCACCTCATCCTCATGATCTCCTGTCCCAGAAACCTCTACTGCATGTGCTTCATGTCGCACTTCAACATGTACCTCATCCTCATCATGTGCAACTCGGTCATCGACCCTCTCATTTACGCTTTCAGGAGTCAGGAGATGAGGAAAACGCTGAAGGAGATCATCTGCTGCTACAGTCTGAGGAACGTCTTTGGAATGTCCAGGTAGTTTCAAACCCCAAAAAACGAGAGATGGGTGATCATTTCACAACAATTTAAGAAAGTCTTAGAAGATATCCCAACCCTGCCTTGGTCTAGatggaaaatatgttttttttgtgatgataCTCTTTCAAACTCTATCAAACAAAAAAGCCAGACAATTAATCAGGAGCTCTTCAGTGCGCAAGGATGCTAATTAGAATGAGGCAATTGTTGATAATATATGTAGATATTGCTGGAGAATTAAGGAGGCCTTAGAACTATGGAACAATATAATCCTCAACAGACAATGGGTTTTAATATCGCAGTCTCCAGGGACATGCAggagctgtcaatcaaaatcTGTGGGAAAAACAAGTGCAATCATTTGTCAAATTAATCATGCAAAACACAGCTTGATGTATTGTTGTATAGGTAAGATGAAACTGTAATAATGCATGCAATTTATATTGCTGAATGCACTCTGTGGTTAGCGTTGAAACTAAGAAAGTATGAGCCACTCTATTGAATCCCAAGATAAAATCCAATGCCGGCagtcttcagtttttttttaatggcacaatatatatagacatattacAAGACAGAACATGAAGTACACTTATATaagaaaactgagaaaaatgGATTTACTGTCATGCTGTTCATAAAATGTGTGGTTAAGGTTTCAAGGCTTATCATGTCACTACCAATTTTTCTACTGTCTTCAGGTGTTCTGCAATAGATGGAATTGAAATGCTCCACATATGCCtgtacaatgtgtgtgtgtgtgtgtgtgtctgttttatgtagctgcaaaaaagaaataaaaaatagtctTATATATATTGATACAAAAAGCATAGCAGAGAAAATTAGTTCTATACTGTCTGACGAAacgtcaaaaacaaaacaaaacattggtATTGCTGACTTGTCATCACAATTAAAGCATTTGTGGAAATTCTGccaatttatatattattataataagcaCGAATGTGTACTTGAAGTTCAGGGTCTGCAATTATTCACTGTATTTACTACTGaccctttaaatgtaataacattCATTTCTATGGCTTACAAAAAAATCATCGATGTGTATTGGCTATGAAGTTTCAGGGTGAGAGTCCGTGTTTCTGTTGTTTGTGATTATGCTGCTTACTGTTTACAGCCACTGGAAAAAAATCTGTAcagatggattttttttgcttgttgttTCTGCATTCAATCAGTGCCACTCAAGTTAAAGACTAACAGATGTCCAGAAATAAAGTGAGGACTAAATTACATATGTTTTCATTGAATAGTCAATGTGTAATTGCCACAAAccacatgcatgtttttatttaacctgGTCGaccaaatgcatttatatgaatatattcacgagaccggggctagttgtcacactcTTTTAGGCGGTTACCTCTAATGCTTTGCACAAAGGTGTAGCCTTTTAAAGGCACCTTTTCTTTCTGAGAGTGTTTAAGAAACAAggaacaattaataaaaaatcaaaaatgtgacTTAAATTCCAAACCAAATGGAACCATAACTTATCAAATGTGACAACTTCACTTGTCCAACAAATATAGCAGATATATAGAATTTTTAGCTTGGAGGAAATAATGATTAGGAAAGAGAGACGTCACGTCGATACAGACGAATTGGAGGTCTTTCCAGAGAGACCTTAAGTCTGTCTACACATGCTTGCCTCGTGAGACAGTTAAGGCAAGGTGCACCGCTATCGACTAGGGAGCAAAAAACTAGGTTGCAAAAAACACTTACTTGTTCCACAGTTGGGCAGAGTAGGACCTTTGAGAGGGACCAGCACGTTCCCTTGGTAGCCCCACTGCCCGGTGGAGTGAGGGTCCCTGGGAGGTTGGTTCCtcactgtcactttaagaccaCTCAGGTGACTGACTACCTGAAGCAGCGATTGTGACCACTtaacctaaccccaaacctaaacctacccattttaTGTTGAATATAAAAGGATataaaacacaactgaaaaaaGATATCAAACcattgttgtaaaatatttttatactcgCTAATCCCACTCCTACctctaaacctaaacataactatctctgtacagtataagcaaaacaagacagacagataaatgcacaatcatttatttattgcaaaaatgtgaaaagcGGTACCAAAAGTAACCCAAACGACGATGTTCTGCAGCCACTGTTCTCTCTGGCGGAATACAGTAGGTTTGTGTAAGACGCAGAGcaaataaaattgtttcatttcaCAATGATGTTGcgtttttgatgcattttatagTTCTGTTGTCAGTCACAGAATGTCAGAGAAATTTAGACATTAAGTTAAATGACAAGTAAAGATTAAACtattgcagaaatgttgttttaaagaattaaaatgaagtCTTGTTTAACATTATGAAGGCCTGTTTTTGGAGTCGAGCTGGCAGCAGAAACTGATATGACAActaaaagcagcaaaaataataaaatgaatgttgatTTTAATTAGGGTTCACTTTTTTAGGTGTGGTCAGTAAGTCAGGTTTGTACGTTTGAATGCTGAAAATATGTAAGTATTTGTAcgtttagattttaaaaatatgtcagttttgtacattttagtgcctttatatttacattttatattaacattttgcaaacaATGCGTATGAATTATCATTTCCAATTATAATTTCCTAATTGGCTGATTAATAGTTAGTGttagaattagggatgtagaataaggcattattatgCGTTTAATTAGTACTATAAAAGGCTAATATTTTAGtgatatgcatgcaaataagcaactagttaaaagaccttaaaataaagtgttatcattttaatttgctttttttaatgtaaacctATTGAGATGTAACCCTTGTGACGACTAGCCCCGTTTTTCTCCAGAAACTCTTATCCAACAGCCTACTAAATGCACACTGGGTTTCATACAGTGCGTTCATGCCACATGTATATTCTATAAAACGTTTTATATTTGACTTACAGTAGTATTCTGGTTGATTATCGTCTTCTGATTAATATTTAGTCTCTGTTACTGCTTCGACTGTGTAAATATGCTCCGTCTGGCTGTTGCTCAGCTTGATTTTTCCCTCTTCAGAAGAATAAGGGCATCCCTCCCTCAACGGGCTCATGCCGGTAATCATAGAATGTGCCTTCACCGTGTCCTGTGCCGTGGAGATGACCTGGAGGCTGTCGGAGCCGTCCTCTTGGTCTCTGTGTGATACATTAACTGCTCAGGTCTGCTGGCTCTCCATGAAGAATCAATGACAATCTGTCTCTGAACCCCTCACTGTTTCACCCGAAAGCGTCTTGAAATTTATTCTGGAGTGGTTTCACGCCCACAGACAATTATTAGACAGTGCCAGTCGATACacaaatataaagatatacGTAAAAAAGAcacgtttttcatttttgtcttggGTAAAACGGCTGGTTTGAGTGGACGGCAGTATTTCGCCTCACACTGTGATAAATGCTCTGTGCATCTGTGTTATGCCGTATGATATCTTATTTGGTtgcatgtataattaaaatataagaatgaaGCTAA

Function

symbol description
mc5ra Enables protein heterodimerization activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human MC5R (melanocortin 5 receptor).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004977 melanocortin receptor activity molecular_function

KEGG:

id description
K04203 MC5R; melanocortin 5 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218104.1 True 7631 mRNA 0.39 2 4244693 4267138

Neighbor

gene id symbol gene type direction distance location
cthrc1a cthrc1a,cthrc1,LOC107746934,LOC107668704,LOC107675657,LOC107754923,LOC108438867,LOC108257304 coding downstream 26980 4211439 ~ 4217713 (-)
rims2b rims2,LOC107689551,LOC107754909,LOC107569304,LOC107668707,LOC108257276,LOC107559391,LOC107732136,LOC107675654,LOC105892072 coding downstream 45451 4074040 ~ 4199242 (-)
zfpm2b zfpm2b,LOC107714469,LOC107668719,LOC107689530,LOC107754911,LOC107559400,LOC107569300 coding downstream 425837 3769537 ~ 3818856 (-)
srsf4 srsf4,LOC107569308,LOC107559403,LOC107754925,LOC107689552,LOC107668713,LOC108229131 coding downstream 478289 3759857 ~ 3766404 (-)
tmem200b si:ch211-204a13.2,LOC107714467,LOC107668712,LOC107754915,LOC107569305,LOC107689563,LOC107559402 coding downstream 485286 3754224 ~ 3759407 (-)
rnmt rnmt,LOC107668718,LOC107754922,LOC107566559 coding upstream 18154 4285292 ~ 4296757 (-)
ldlrad4a ldlrad4a,LOC107668709,LOC107675658,LOC107566561,LOC107746928 coding upstream 36277 4303415 ~ 4376360 (-)
seh1l seh1l,LOC107668717,LOC107746927,LOC107748371,LOC107666589 coding upstream 111376 4378514 ~ 4387615 (-)
psmg2 psmg2,LOC107738327,LOC107748372,LOC107672829,LOC107550101 coding upstream 141595 4408733 ~ 4410934 (-)
grhl2b grhl2b,grhl2,LOC107738316,LOC107672862,LOC107748368,LOC107698657,LOC107552317,LOC107550099 coding upstream 165005 4432143 ~ 4450461 (-)
LOC122323452 NA non-coding downstream 12278 4228999 ~ 4232415 (-)
G130360 NA non-coding downstream 34420 4187442 ~ 4210273 (-)
G130355 NA non-coding downstream 38767 4181499 ~ 4205926 (-)
G130352 NA non-coding downstream 49002 4172551 ~ 4195691 (-)
G130341 NA non-coding downstream 179401 4049813 ~ 4065292 (-)
G130459 NA non-coding upstream 41 4267179 ~ 4267424 (-)
G130463 NA non-coding upstream 20350 4287488 ~ 4287870 (-)
G130465 NA non-coding upstream 31371 4298509 ~ 4300326 (-)
LOC122323668 NA non-coding upstream 136879 4404017 ~ 4405900 (-)
G130494 NA non-coding upstream 141056 4408194 ~ 4408394 (-)
tmem222b tmem222b,LOC105903612,LOC107550652,LOC107754919,LOC107567586,LOC107700749 other downstream 692868 3537441 ~ 3551825 (-)
kdf1b LOC107700730,LOC107712602,LOC107550653,LOC107754920,LOC107567594,LOC107689538 other downstream 730014 3508834 ~ 3514679 (-)
zdhhc18b zdhhc18b,LOC107700701,LOC107737765,LOC107689541,LOC108413341,LOC107550656,LOC107570996 other downstream 864766 3363481 ~ 3379927 (-)
LOC122323345 fam46bb,LOC107712594,LOC107700817,LOC107737782,LOC108413340,LOC103370123 other downstream 920865 3313389 ~ 3323828 (-)
G130083 LOC103461248,LOC102786159 other downstream 1094904 3149154 ~ 3149789 (-)
polr2k NA other upstream 272841 4539979 ~ 4541629 (-)
G130696 NA other upstream 476434 4743572 ~ 4941832 (-)
LOC122323502 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other upstream 820106 5087244 ~ 5222883 (-)
G130744 sema4ab,LOC107702572,LOC107672813,LOC107598230,LOC107731578,LOC107705066 other upstream 874367 5141505 ~ 5260164 (-)
G130763 NA other upstream 978215 5245353 ~ 5252189 (-)

Expression


Co-expression Network