abitram (fam206a,LOC107670282,LOC107556369,LOC107710376,LOC107556344)


Basic Information

Item Value
gene id abitram
gene name fam206a,LOC107670282,LOC107556369,LOC107710376,LOC107556344
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 10312162 ~ 10314093 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218139.1
tgtgtaactTGATTTGTCTTCCGGCGTCAAACATCACTGTTTATATGTGATCAGATTATCAGCCTctccaaaaaaattaattgctgtGGTGGATGCCGACATGGAAGATAGTGAAAAGAAAGCCCCATCAGTAATCGATCGTTATTTCACCCGCTGGTATAAAACTGATCTGAAAGGAAAAGCATGTGAGGATCACTGCATTCTACAGCACTCCAACAGGTACGTTatatttcttattgttttatgtaAGTCTCATCCTATCCTTCAGAATGGACggaaaatcaaaaatataaactacCAGATCAGCGATGGATGCAGTCGTCTGAAGAACAAGGTGTCTGGAAAGTCAAAGCGAGGCGGTCAGTTCCTGACAGAGTTTGCGCCACTGTGTAGAATAACATGTACAGATGAACAGGAATACACCATATTCAGCTGTATCAGAGGACGCTTTCTAGAAGTAAATGAAGCCATATTGAACAAGCTAGACCTGTTATCGGAAAAGCCTTCCACAGAGGGATACATTGCCGTTATACTACCCAAATTTGAAGAGAGTAAGAGTATCACTGAAGGCCTTCTGACCAGAGAACAATATGAGGAGGTTCTGACTAAAAGAAACCAACAAGAAGAGCCTTGCTGAGATCAACTTGCGCTTTGGAGCTGCCGAATGACTGCCGAGTCTGCTTTAAGGAATAATTACTTCAAGTTGAGAGAAACATGAGTGGCAGCATGAATGTGTGCCactcacattaaaaaaaaaaaaacatcttgaggAAATTTTGAAGGAATGAAGACTTGTCTGCTGGATCCAGAGGAGTCTTGGATTTGACTGGAGTGCATTTTGTTGGACCACTAGTATAACAATGCCagtgttatgtttttttgagtgtgtttaTTGTTTCATTAAGAAGTTTCCTAATTTGAGAAGTAAAAGATCTGTG

Function

NR:

description
protein Simiate

GO:

id name namespace
GO:0006546 glycine catabolic process biological_process
GO:0005960 glycine cleavage complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218139.1 True 938 mRNA 0.40 6 10312162 10314093

Neighbor

gene id symbol gene type direction distance location
gabbr2 gabbr2,LOC107670291,LOC107724329,LOC107710365,LOC107653854 coding upstream 56924 10095157 ~ 10255238 (+)
galnt12 galnt12,LOC107724331,LOC107670286,LOC107710330,LOC107653850,LOC107556353 coding upstream 233994 10064486 ~ 10078168 (+)
poc1bl poc1bl,LOC107556339,LOC107724359,LOC107670292,LOC107556401,LOC107653811,LOC103026965,LOC108425761 coding upstream 250904 10027238 ~ 10061258 (+)
trnai-aau_70 NA coding upstream 383689 9928400 ~ 9928473 (+)
pex1 pex1,LOC107724360,LOC107556332,LOC107710270,LOC107556352,LOC107702066 coding upstream 385359 9915613 ~ 9926803 (+)
ccn4a wisp1a,LOC107724346,LOC107670277,LOC107574716,LOC107556407 coding downstream 74270 10388363 ~ 10392958 (+)
wdyhv1 wdyhv1,LOC107653860 coding downstream 98178 10412271 ~ 10413762 (+)
angpt2b angpt2b,LOC107663733,LOC107724362,LOC107564496,LOC107698979,LOC107710743,LOC107565051 coding downstream 449058 10763151 ~ 10784158 (+)
LOC122323863 NA coding downstream 805170 11119263 ~ 11121001 (+)
LOC122323768 LOC107726138,LOC107664713,LOC107563276,LOC107555946,LOC107698981 coding downstream 1193179 11507272 ~ 11510522 (+)
G131966 NA non-coding upstream 327856 9977593 ~ 9984306 (+)
G131958 NA non-coding upstream 367237 9942080 ~ 9944925 (+)
G131932 NA non-coding upstream 399406 9873151 ~ 9912756 (+)
G131913 NA non-coding upstream 556238 9754504 ~ 9755924 (+)
LOC122323289 LOC107702073,LOC107556364,LOC107710198,LOC107653841,LOC107724322 non-coding upstream 648457 9661351 ~ 9663705 (+)
G132013 NA non-coding downstream 123995 10438088 ~ 10438486 (+)
G132014 macf1,macf1a,LOC107724266,LOC107653864,LOC107670270 non-coding downstream 125600 10439693 ~ 10440259 (+)
G131985 NA non-coding downstream 210613 10524706 ~ 10580552 (+)
G131987 rnf19b,ak2,LOC107710473,LOC107653815,LOC107670272,LOC107724316,LOC107564491,LOC107556415,LOC107556372,LOC107670285,LOC107710539,LOC107724312 non-coding downstream 268657 10582750 ~ 10601467 (+)
G132081 NA non-coding downstream 318555 10632648 ~ 10697836 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 558606 9734220 ~ 9753556 (+)
G131801 trib1,LOC107724318,LOC107565192,LOC107702074,LOC107710180,LOC107556392,LOC107653840 other upstream 673201 9636973 ~ 9638961 (+)
si:ch211-215i13.3 LOC107579802,LOC107724304,LOC107702091 other upstream 773660 9536318 ~ 9538502 (+)
LOC122323856 LOC107745707,LOC107709282,LOC107691523 other upstream 1146068 9160370 ~ 9166094 (+)
yars1 yars,LOC107687080,LOC107691530,LOC107724337,LOC107709269 other upstream 1936295 8370706 ~ 8375867 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other downstream 101547 10415640 ~ 10418096 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other downstream 1208136 11522229 ~ 11523881 (+)
LOC122323774 NA other downstream 1797186 12111279 ~ 12112897 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other downstream 2109197 12423290 ~ 12425078 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 2707324 13021417 ~ 13026026 (+)

Expression


Co-expression Network