arl4ab (arl4ab,LOC107702133,LOC107724349,LOC107584268,LOC107555559,LOC107709262,LOC107696203,LOC108425359)


Basic Information

Item Value
gene id arl4ab
gene name arl4ab,LOC107702133,LOC107724349,LOC107584268,LOC107555559,LOC107709262,LOC107696203,LOC108425359
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8556900 ~ 8559488 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218142.1
GCAGCTCGCTCTAGAGTCAGTGAAACAGGCGCTGTTACAGGGAGTGGATACACTTGTCGGCTCAGCTGATCTGAATGGCAACAATATTTTGGAAATAGTCGTAAACATTTTCATCTAATGATCTAACGAGCAACGCAAGGTTCGCACTAAATAAGGTTATAGCAGCAGCAGCTTCTCGGGGGAACGAGAGAAGCCTTGTGAATATTTGGTGAAGCATCAGCGGCAGCGGCGACACCTGGTCTCCTGAGTCTCCGCGTTCGCTTTCATCCTCATCAGAGTGGCGGTACAAGATGGGGAATGGATTATCAGAGCCCCATGCCATCTTTCCCTGCCTGCCGTCCTTTCAGGCCCTGCACATTGTTATTCTTGGCTTGGATTGTGCCGGTAAGACTACCGTATTGTACCGGCTACGCTTTAATGAGTTCGTGAACACCGTTCCCACCAAAGGCTTCAACACAGAGAAGATCAAGGTGACTCTCGGTGGGAAAGGCCGGACTGCAACCTTTCATTTCTGGGATGTAGGAGGTCAGGAAAAGCTCCGGCCTCTTTGGCGCTCCTATACGCGGTGCGCCGACGGCCTCGTGTTCGTAGTGGACTCGGTAGATGCCGAGCGCATGGAGGAGGCCAAGACGGAGTTGCATAAGATCACACGGCTACAGGAGAACCAGGGGGTGCCCGTGTTGGTGGTGGCTAACAAGCAGGACCTGCGCAGCGCTTTGCCACTAGGTGAAGTCGAACAGATGTTGGCACTGAACGAGCTCGGCTCTCACACGCCTTGGCACCTCCAACCGGCCTGTGCCATCATCGGAGAAGGTCTACAAGAAGGCCTGGAACGTCTCCACTCCATGATCATCAAGCGGAGAAAGATGATGAGACAGCAGAAGAGGAAAAGATGACTGTTTGGTGATGGGATGTGAGCTGGATGTGGTGGTAGGCCTCTATGAGGGCTCTGCTGGTGATGTGCCATGGGCCTTTGTGGCCCTGCGCTCCTGGAATTATTGTTTCGGCGGGCTGAGTTTTATCAGTCAGATGGTTCTGGATGAATACAGTTCAGAGACCGAAAGAGGACAATATTGATTTTACCACTTTGGTTGTTGGATTGTAGCAGCGGTGGGACGATCACATGGAACTTTTACATCAATACAAGTGTTACAAAACGTCAACAGGTCTTGTGGTACATTGAGTTGTCATGAAGGACGACACTGGATTCGAACTTGTAAATGACGAAGACCTATCCCTGAAGTCTTTGTCCTTGCGTCTGAAGTGTTACACGTATCCTAGCATCCTAGCATTCATGTAAAGTCTTGAAATGGAAGGATTGATTACCAAAGCTGCCATGGACATCATGAATAATCCAATGTATACATTCAGGTGATGTTATTTCCCCCCATTTGGTTTTATCCAGAATGGCCAACCATCAATTCCCCTGGGTGTTTGTTGTCCCGGTGGACAGGGGAACCAGAATAAGCTTTATGGATCACTTGTTTGGGAATGCACAAAGGTTGAAATCTGATTACAGAAGGGTTGACCACTGAAGTAGTTCAACAGGTGAATGTGGTAACTGTCTAGAGGTTAACTCAACATGTTGACGTCGTAGCTTCTCCTAAGTTTGAGGACTACTCCTAGCTGTACCTACATTGTGTGCTTCCCTGAACAACAAGAGATGTTTAAATGCACTTTAGCAATTCCCTTTTCTAAACTATGAACTTGCAGCAtctgatttttttgtaaagagtTTATCATGCTACTAAAAGAAGTAATGTATTGCTTCGagtgaagcattttttttaatatccacTGTTCCACATTCTAATGTGTCGGTTTGTCACTCAGTGCTTGTGTGTTGGGGGATGTTCATATTTATGTGTCAGAATTTGTACACTTTGAATAAATCCACAACTACACTAAACATCA

Function

symbol description
arl4ab Predicted to enable GTP binding activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be active in cytoplasm and plasma membrane. Is expressed in several structures, including adaxial cell; axis; cardiovascular system; digestive system; and presumptive telencephalon. Orthologous to human ARL4A (ADP ribosylation factor like GTPase 4A).

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 4A

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07945 ARL4; ADP-ribosylation factor-like protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218142.1 True 1914 mRNA 0.47 2 8556900 8559488

Neighbor

gene id symbol gene type direction distance location
bzw2 bzw2,LOC107724358,LOC107702135,LOC107709265,LOC107691535 coding downstream 107156 8436291 ~ 8449744 (-)
rbbp4 rbbp4,LOC107568807,LOC107709266,LOC107584269,LOC105015627 coding downstream 121762 8430681 ~ 8435138 (-)
kiaa1522 kiaa1522,LOC107724336,LOC107584271,LOC107709267,LOC107568804 coding downstream 144066 8376208 ~ 8412834 (-)
myclb myclb,LOC107584272,LOC107709270,LOC107562763,LOC107691528,LOC107687096,LOC107724275 coding downstream 229929 8322649 ~ 8326971 (-)
hpcal4 hpcal4,LOC107562761,LOC107687092,LOC107691524,LOC102228321,LOC107745708 coding downstream 340917 8197711 ~ 8215983 (-)
scin scin,LOC107724348,LOC107702132,LOC107696204,LOC107709261 coding upstream 1889 8561377 ~ 8569332 (-)
tmem106bb tmem106bb,LOC107696205,LOC107584266,LOC107709260,LOC107724356,LOC107702131,LOC107555560 coding upstream 17778 8577266 ~ 8581347 (-)
necab1 necab1,LOC107724363,LOC107702129,LOC107696197 coding upstream 40618 8600106 ~ 8627992 (-)
c19h6orf62 zgc:111986,c24h6orf62,LOC107555566,LOC107724342,LOC107702127,LOC107743835 coding upstream 100935 8660423 ~ 8664940 (-)
LOC122323849 cunh6orf229,LOC107555565 coding upstream 108574 8668062 ~ 8671099 (-)
G131654 NA non-coding downstream 1308 8541224 ~ 8555592 (-)
G131511 NA non-coding downstream 201783 8353533 ~ 8355117 (-)
G131508 NA non-coding downstream 273459 8283098 ~ 8283441 (-)
G131507 NA non-coding downstream 274076 8282601 ~ 8282824 (-)
G131506 NA non-coding downstream 276640 8279994 ~ 8280260 (-)
G131675 NA non-coding upstream 79940 8639428 ~ 8639657 (-)
G131697 NA non-coding upstream 360552 8920040 ~ 8920695 (-)
G131820 atxn1,atxn1a,LOC107696220,LOC107724277,LOC107743820,LOC107702111 non-coding upstream 480460 9039948 ~ 9048451 (-)
G131827 NA non-coding upstream 521362 9080850 ~ 9081105 (-)
G131838 NA non-coding upstream 582365 9141853 ~ 9217661 (-)
trit1 trit1,LOC107691527,LOC107687082,LOC107709271,LOC107562762,LOC107724344 other downstream 235999 8287145 ~ 8320901 (-)
khdrbs1b LOC107745714,LOC107691518,LOC107584277,LOC107687088,LOC107709277,LOC107562753 other downstream 427630 8118949 ~ 8129270 (-)
G131373 NA other downstream 951757 7602133 ~ 7605143 (-)
LOC122323248 LOC107687071 other downstream 1104984 7445758 ~ 7451916 (-)
LOC122324169 si:dkeyp-46h3.1,LOC107694323,LOC107584363,LOC107691540,LOC107754838 other downstream 1158954 7395180 ~ 7397946 (-)
tdp2b tdp2,LOC107743833,LOC107696206,LOC107555562 other upstream 95010 8654498 ~ 8659486 (-)
hey1 hey1,LOC107584259,LOC107702120,LOC107555572,LOC107696214 other upstream 165018 8724506 ~ 8786729 (-)
si:dkeyp-120h9.1 si:dkeyp-120h9.1,LOC107702119,LOC107584261,LOC107724282,LOC107743828,LOC107696212,LOC107555569 other upstream 167771 8727259 ~ 8738786 (-)
G131861 stk3,LOC107724280,LOC107653827,LOC107710087,LOC107702102,LOC107556381 other upstream 749232 9308720 ~ 9309352 (-)
cibar1 fam92a1,LOC107710198,LOC107653841,LOC107556364,LOC107702073,LOC107724322 other upstream 1099868 9659356 ~ 9664459 (-)

Expression


Co-expression Network