si:ch211-195b13.1 (si:ch211-195b13.1,LOC107738591,LOC107672866,LOC107702504,LOC107731568,LOC103036792,LOC108411161)


Basic Information

Item Value
gene id si:ch211-195b13.1
gene name si:ch211-195b13.1,LOC107738591,LOC107672866,LOC107702504,LOC107731568,LOC103036792,LOC108411161
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5471782 ~ 5483668 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218180.1
CGCGCGGCTGGCGGGGGAAGACGGGAGCGCTGGCAGCGTCGGAACCCAGCGGAGAGCTCCGTCGAGCCGTTTTGCTTGCCGGGAGATCAGCGCTTTGCGATAAAACACGGGCTCAGCCGAAGGAGCGCGGTCCTCCTGTGGATTTACTCGAGAGATAAAAGTGATGGCAGTTACTCAGGCTGGATGTGACTTGACTTACTGCAGGATGAGGGGCATCGTGTCCGTTCTTACCGcttttattaaagaaaggaagatGGGCTTGAACGACTTCATCCAGAAGCTTGTTTCCAACCCTCCTATCTGTCAGCATGCCGAGGTCGGCTCGTTCTTAAAAATCGACGAGAACCAGaacgaggagctggaggagaatCACCTGTGTTTGACCAATCCCAGGAGCTCTTTGGCCGAGGAGACTCAGATCAAGCCTTCCGATTTCGACTACCTAAAGATCATCGGGAAGGGGAGCTTCGGAAAGGTCCTGCTCGCGAGGCACAAGGAGAACGAACGATACTACGCCGTGAAGGTGCTGCAGAAGAAAATCATCCTGAAGAAGAAAGAGCAAAAGCATATCATGGCGGAAAGGAGTGTgttaatgaaaaatatcaagcatCCATTCCTGGTGGGGCTGCACTACTCTTTCCAAACCACAGACAAGCTCTATTTTGTTCTGGACTACGTCAATGGAGGAGAGCTGTTCTACCACCTCCAGCGTGAGCGGGTGTTTTTGGAGCCCAGGGCGAGGTTTTACGCCGCTGAAATCGCTAGCGCGCTCGGTTACCTCCACTCGCTGCACATAGTTTACAGAGATTTAAAGCCAGAGAACATCCTCCTGGACTCTCAGGGCCACATTGTGTTGACAGATTTTGGTCTGTGCAAAGAAGGACTGGAACCTAACGGCACCACCACAACGTTCTGCGGGACTCCTGAGtaCTTGGCTCCTGAGGTGCTTCAGAAACAAGCCTATGATCGTACAGTAGACTGGTGGTGCCTGGGATCGGTGCTGTTTGAGATGCTTTACGGACTGCCTCCGTTCTACAGTCGCAACACAGCCGAGATGTACAACAACATCCTTCACAAGCCCCTAGTCCTGAAGCCTAACGTGTCCAACTCTGGCCGCGACCTGCTGGAGGGGCTTCTGCACAAGGACCGTACCAAGAGACTGGGGTCCAAAGATGATTTTCTGGAAATGAAGTTCCACAGCTTTTTCTCGCCCATCAACTGGGACGACCTCATGGCCAAAAAGATCACGCCTCCATTCATTCCCACAGTGACTGGTCCCACTGATCTCCGGCACTTTGACCCAGAGTTCACCCACTTACCCGTGTCGACCTCCCTATGCAACACCGATAACCTGCACGTGACCAGCAGCGTACGGGAGGCAGCCGGAGCGTTCCCAGGCTTTTCTTACGGTCCTCCGGCTGACCATGCCTTCCAGTAACCGCTTCCGTGACCCTCCATTCCAGCATCGCTAAACGCGTCGAGAAGAAGGACCACAGCGCGGGACGTTTAGCTCTTCTGATTTATTTGCGCGAACGAGGGACACCCGTGCGTCACCAAGAGGAACGTGGGACGTCGCAGGACACAAACTACAGTAACAACAACTTCCAGGAAAGATGCAATGCGTGCCAATGGATGCAGAGAGGACCTGAGCTCCTAGAGAGCTTAGAAGTGCCTGAGAGTTTAACTGATGATCTgcggaggggaaaaaaaaaaactggcaaatTTGTACAACAAAACGTTGCACGCCAGAGACGATGGCGCCAGCTGCTTTTGTGATCTCTTACGTTTGATCGAAATGTCTTTGGacgatgttttatttaattgcgtTTTTCATGCATCGTTGCACAGCGGAGGTAAAGGATCAAGAAAAGTACCGAAGTCACGGATGGTCCGAAAAAGTACTAGAGGAGACACAGGCTGTCCGACTCAAATATCAATAcgttttttgctgaaaaaaactttattatctTCTTCCTGTTgacaaatgttaatttaataactGCATTATTTATCGTACTGCGTTATATTAGTGTGGTTTAGCTTAACTAAGCTACATTTAGGTTTGTATTAGTTAAACAGGGCTTTTAGCTGTGTGATTATTTGTCTGAACGACTAGAAGACATCCTGTGCTCCTCCAAAAATCGATATTTTTGTCTTACAAGtactttctttcctttttctctccaaTGCCAGCACTTTTACACAAAATGCCAGACACTGTGTTTCAAGGCAGTTTTAGGAGTGGCGCGTCACATTCTGTTATCATACGTTTAGTGAGCCGGATGTGTGTTTTATGCATACGTTTATCATTGTTATCTGAAGCGAACACGGCATGTCGATTGGATTGTATTGAAACCTTTGCATCGTGTAGGAGCCCAGAAggaactgtgtcttttttttgtgttttgttttgttcaaattGTGCCTGTACAGCTCATTTATGTGATACATTTCCATGTGCGTCTATCATTCCTGTCTGTATTGCTCTGGGTTGGACAGGGACATGGAATGCTGTGCAATAGAAACGCTGACTCGATGGAGATGTGACCGGTTTGTCGTGGGACGACTGAGTGGTATCGGCTTAATGAAGGAGAAGGGGTTCGGATGCCCTCATGAAACGCATCCCtgttttaactgtaatatatttcatatcatCGGACCAATAATGCGCTATTTGTTCTTTAGATAATGCAAACATGGCAATATGgataaagtttattttcttccatttttggAAGTTATTCATAtatggttttatatttttccatgtatatttatttacacgTTGTATATTTTACCTCTAATGATCAGAGTATTACATTCttagaataattaaatattgagaATGATCTAtatgaatgcaaaataaatatataaaagtgaa
>XM_043218181.1
GGAAAGAGCGAAAGGAGAGGCGAGGGACACGGAGCGAAGAGTGATGAGGCCAATAATTTGCTGATCTTTGAATCTGAGGCGATGAGACTGCCTCTAACAATACTGCAGCGGGACAGAGATAGGCTcatttagacacacacacacacacctacacactcCCACACGCATACATGTTCACACGCGAAATGATGAACTGCTGAGGACACGCTGCTAAAATCGGCTTTTAAAGGATTTCTGTCATAGCACAATTGAGAAAAAAGATCCGCTCTGGACTGTGAGATAAACGCTGTTAAATGAACATGAAGACCGGGAAGAAATCATTCATAGcttttattaaagaaaggaagatGGGCTTGAACGACTTCATCCAGAAGCTTGTTTCCAACCCTCCTATCTGTCAGCATGCCGAGGTCGGCTCGTTCTTAAAAATCGACGAGAACCAGaacgaggagctggaggagaatCACCTGTGTTTGACCAATCCCAGGAGCTCTTTGGCCGAGGAGACTCAGATCAAGCCTTCCGATTTCGACTACCTAAAGATCATCGGGAAGGGGAGCTTCGGAAAGGTCCTGCTCGCGAGGCACAAGGAGAACGAACGATACTACGCCGTGAAGGTGCTGCAGAAGAAAATCATCCTGAAGAAGAAAGAGCAAAAGCATATCATGGCGGAAAGGAGTGTgttaatgaaaaatatcaagcatCCATTCCTGGTGGGGCTGCACTACTCTTTCCAAACCACAGACAAGCTCTATTTTGTTCTGGACTACGTCAATGGAGGAGAGCTGTTCTACCACCTCCAGCGTGAGCGGGTGTTTTTGGAGCCCAGGGCGAGGTTTTACGCCGCTGAAATCGCTAGCGCGCTCGGTTACCTCCACTCGCTGCACATAGTTTACAGAGATTTAAAGCCAGAGAACATCCTCCTGGACTCTCAGGGCCACATTGTGTTGACAGATTTTGGTCTGTGCAAAGAAGGACTGGAACCTAACGGCACCACCACAACGTTCTGCGGGACTCCTGAGtaCTTGGCTCCTGAGGTGCTTCAGAAACAAGCCTATGATCGTACAGTAGACTGGTGGTGCCTGGGATCGGTGCTGTTTGAGATGCTTTACGGACTGCCTCCGTTCTACAGTCGCAACACAGCCGAGATGTACAACAACATCCTTCACAAGCCCCTAGTCCTGAAGCCTAACGTGTCCAACTCTGGCCGCGACCTGCTGGAGGGGCTTCTGCACAAGGACCGTACCAAGAGACTGGGGTCCAAAGATGATTTTCTGGAAATGAAGTTCCACAGCTTTTTCTCGCCCATCAACTGGGACGACCTCATGGCCAAAAAGATCACGCCTCCATTCATTCCCACAGTGACTGGTCCCACTGATCTCCGGCACTTTGACCCAGAGTTCACCCACTTACCCGTGTCGACCTCCCTATGCAACACCGATAACCTGCACGTGACCAGCAGCGTACGGGAGGCAGCCGGAGCGTTCCCAGGCTTTTCTTACGGTCCTCCGGCTGACCATGCCTTCCAGTAACCGCTTCCGTGACCCTCCATTCCAGCATCGCTAAACGCGTCGAGAAGAAGGACCACAGCGCGGGACGTTTAGCTCTTCTGATTTATTTGCGCGAACGAGGGACACCCGTGCGTCACCAAGAGGAACGTGGGACGTCGCAGGACACAAACTACAGTAACAACAACTTCCAGGAAAGATGCAATGCGTGCCAATGGATGCAGAGAGGACCTGAGCTCCTAGAGAGCTTAGAAGTGCCTGAGAGTTTAACTGATGATCTgcggaggggaaaaaaaaaaactggcaaatTTGTACAACAAAACGTTGCACGCCAGAGACGATGGCGCCAGCTGCTTTTGTGATCTCTTACGTTTGATCGAAATGTCTTTGGacgatgttttatttaattgcgtTTTTCATGCATCGTTGCACAGCGGAGGTAAAGGATCAAGAAAAGTACCGAAGTCACGGATGGTCCGAAAAAGTACTAGAGGAGACACAGGCTGTCCGACTCAAATATCAATAcgttttttgctgaaaaaaactttattatctTCTTCCTGTTgacaaatgttaatttaataactGCATTATTTATCGTACTGCGTTATATTAGTGTGGTTTAGCTTAACTAAGCTACATTTAGGTTTGTATTAGTTAAACAGGGCTTTTAGCTGTGTGATTATTTGTCTGAACGACTAGAAGACATCCTGTGCTCCTCCAAAAATCGATATTTTTGTCTTACAAGtactttctttcctttttctctccaaTGCCAGCACTTTTACACAAAATGCCAGACACTGTGTTTCAAGGCAGTTTTAGGAGTGGCGCGTCACATTCTGTTATCATACGTTTAGTGAGCCGGATGTGTGTTTTATGCATACGTTTATCATTGTTATCTGAAGCGAACACGGCATGTCGATTGGATTGTATTGAAACCTTTGCATCGTGTAGGAGCCCAGAAggaactgtgtcttttttttgtgttttgttttgttcaaattGTGCCTGTACAGCTCATTTATGTGATACATTTCCATGTGCGTCTATCATTCCTGTCTGTATTGCTCTGGGTTGGACAGGGACATGGAATGCTGTGCAATAGAAACGCTGACTCGATGGAGATGTGACCGGTTTGTCGTGGGACGACTGAGTGGTATCGGCTTAATGAAGGAGAAGGGGTTCGGATGCCCTCATGAAACGCATCCCtgttttaactgtaatatatttcatatcatCGGACCAATAATGCGCTATTTGTTCTTTAGATAATGCAAACATGGCAATATGgataaagtttattttcttccatttttggAAGTTATTCATAtatggttttatatttttccatgtatatttatttacacgTTGTATATTTTACCTCTAATGATCAGAGTATTACATTCttagaataattaaatattgagaATGATCTAtatgaatgcaaaataaatatataaaagtgaa

Function

symbol description
si:ch211-195b13.1 Predicted to enable potassium channel regulator activity and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction; neuron projection morphogenesis; and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus.

NR:

description
PREDICTED: serine/threonine-protein kinase Sgk1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218180.1 False 2884 mRNA 0.47 11 5477886 5483668
XM_043218181.1 True 2978 mRNA 0.45 11 5471782 5483668

Neighbor

gene id symbol gene type direction distance location
LOC122323295 NA coding upstream 46994 5407049 ~ 5424788 (+)
si:dkeyp-92c9.2 si:dkeyp-92c9.2,LOC107598237,LOC107571465,LOC107738595,LOC107731579,LOC107672824,LOC107702702 coding upstream 118522 5344211 ~ 5353260 (+)
thbs3b thbs3b,LOC107598217,LOC107672882,LOC107702531,LOC107738600,LOC105901446 coding upstream 129068 5330425 ~ 5342714 (+)
mtx1b mtx1,mtx1b,LOC107672823,LOC107550195,LOC107598218,LOC103026555,LOC105901471,LOC108410892 coding upstream 142782 5316918 ~ 5329000 (+)
polr3gla LOC107672826,LOC107724664,LOC107598238,LOC107731563,LOC107702713,LOC107550194,LOC107576745 coding upstream 179984 5288167 ~ 5291798 (+)
eya3 eya3,LOC107738590,LOC107731567,LOC107672865,LOC107702484 coding downstream 1254 5484922 ~ 5500596 (+)
LOC122324215 NA coding downstream 48292 5531960 ~ 5532887 (+)
LOC122323836 LOC107598234 coding downstream 86062 5569730 ~ 5571271 (+)
LOC122323266 NA coding downstream 129400 5613068 ~ 5614130 (+)
rpa3 rpa3,LOC107754810,LOC107598208,LOC107672835,LOC107731561,LOC107702426,LOC107568286 coding downstream 233028 5716696 ~ 5717681 (+)
G130664 NA non-coding upstream 66216 5404453 ~ 5405566 (+)
G130676 NA non-coding upstream 85665 5382816 ~ 5386117 (+)
G130677 NA non-coding upstream 86234 5385136 ~ 5385548 (+)
G130665 NA non-coding upstream 114688 5356870 ~ 5357094 (+)
G130622 NA non-coding upstream 251701 5048394 ~ 5220081 (+)
G130813 LOC107672812,LOC107598225,LOC107571454,LOC107738589,LOC107672867,LOC107731566,LOC107571461 non-coding downstream 19598 5503266 ~ 5505414 (+)
G130833 NA non-coding downstream 64839 5548507 ~ 5548799 (+)
G130835 NA non-coding downstream 81712 5565380 ~ 5587515 (+)
LOC122324017 NA non-coding downstream 127320 5610988 ~ 5612338 (+)
G130855 NA non-coding downstream 130596 5614264 ~ 5632428 (+)
G130640 txnipa,txnip,LOC108410889,LOC107672857,LOC107738596 other upstream 157604 5223700 ~ 5314178 (+)
LOC122324077 NA other upstream 243556 5225081 ~ 5228226 (+)
LOC122323259 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other upstream 292105 5176270 ~ 5179677 (+)
G130637 NA other upstream 308383 5162586 ~ 5163399 (+)
G130613 LOC107745035,LOC100705094,LOC102198470,LOC101485383,LOC107563920,LOC102785635 other upstream 488538 4977885 ~ 4983244 (+)
LOC122324139 LOC107598234,LOC107672810 other downstream 99837 5583505 ~ 5585655 (+)
LOC122323254 sdhaf3,LOC107702681 other downstream 262133 5745801 ~ 5752917 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other downstream 301462 5785130 ~ 5922973 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other downstream 888167 6371835 ~ 6401298 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other downstream 979415 6463083 ~ 6488760 (+)

Expression


Co-expression Network