LOC122324026


Basic Information

Item Value
gene id LOC122324026
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 18706828 ~ 18710010 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218204.1
CTTCCGGTAGAAGTCTTTAGGACTAGTCAGGAGGACTCAGGATTAGTTATCCACTTGCcagaccccagtctgtcgtcaaGACATAACATCTGACTTTAGCTTTATGAAGCTATGCTGTTTAAAACATACAGCAGATGGGCTGCATGAGAACACAAATTGCCACTACATATTTAGTATCCTGATGTGTTATTCAGACAACTTCCTATAAGAACAAACCTTTATGTCACTTCCTTATTCTCAACAATCTCAAGCAGCACTTAAGTCTCTTCGGGCACATTTTCTGTTAGGCTCCAGAGATGGATTCGATCTATGAAAATTCTAGTTTCATTCTTTCAACATTTACTTCTGATGAAAAACCCTCTCAATGCAAAGTCATGGTGAAAAAGATTGAGGAACTTACAGTCAACTACACCACAGTTAGAGAACAACTGTCCTTTTATGAAGTCATAATGAAAAAGATTGAGGAACTTACAGCCAACTACACCACAGTTAGAGAACAACTGTCCTTTTATGAAGCTCAGTTTTGTAAGGTGATCTTCACATGTCAAGCGGATTTGGCAGCTCGAAAGATATACCTCTTTAGTGTGGATAAACTGAACTGGTCAAGAAGTCGTGATTTCTGTGTTTCAAAAGGAACCGATTTAGTCACCAtaaccagccaatcagaacagGATTTTCTGTTCTCTAAAATTAAAGAGATGCACTGGATTGGTCTGAATGATCTGGAAACTGAAGGACACTGGGTTTGGGTGAATAACCAAACTCTCAATGAAACGGGAGTACAGTTTTGGTATAAGAGGATGAATGAGAAAAGCGAACCTGATAACTGGAAAGAAGATGATCCCAATGGAGAACACTGTgctattataaaacatttcagttggTATGATGTTTCTTGCGAACATAAGAGGAATTTTATCtgtgaaaagaaatattaatttaccTCCTtcacaaaatagatttttttgttgtttaagcAGACAAATCTAAGGATAGTTTGCAGTAAGACTTGTGTAGCTCATGCTACAACTATTACTTCAGTTCTTCTGAACCCACAGAACAGGTGTTTGTCACAAACAGAGTGGAACTGAACTGATGATTATCATatgattttacagttttacaacttttttgcctgttttttgtattactttcttcttttcttcactAATGTAGTGTCCTTCCAAAGCTTTA
>XM_043218205.1
CTTCCGGTAGAAGTCTTTAGGACTAGTCAGGAGGACTCAGGATTAGTTATCCACTTGCcagaccccagtctgtcgtcaaGACATAACATCTGACTTTAGCTTTATGAAGCTATGCTGTTTAAAACATACAGCAGATGGGCTGCATGAGAACACAAATTGCCACTACATATTTAGTATCCTGATGTGTTATTCAGACAACTTCCTATAAGAACAAACCTTTATGTCACTTCCTTATTCTCAACAATCTCAAGCAGCACTTAAGTCTCTTCGGGCACATTTTCTGTTAGGCTCCAGAGATGGATTCGATCTATGAAAATTCTAGTTTCATTCTTTCAACATTTACTTCTGATGAAAAACCCTCTCAATGCAAAGTCATGGTGAAAAAGATTGAGGAACTTACAGTCAACTACACCACAGTTAGAGAACAACTGTCCTTTTATGAAGCTCAGTTTTGTAAGGTGATCTTCACATGTCAAGCGGATTTGGCAGCTCGAAAGATATACCTCTTTAGTGTGGATAAACTGAACTGGTCAAGAAGTCGTGATTTCTGTGTTTCAAAAGGAACCGATTTAGTCACCAtaaccagccaatcagaacagGATTTTCTGTTCTCTAAAATTAAAGAGATGCACTGGATTGGTCTGAATGATCTGGAAACTGAAGGACACTGGGTTTGGGTGAATAACCAAACTCTCAATGAAACGGGAGTACAGTTTTGGTATAAGAGGATGAATGAGAAAAGCGAACCTGATAACTGGAAAGAAGATGATCCCAATGGAGAACACTGTgctattataaaacatttcagttggTATGATGTTTCTTGCGAACATAAGAGGAATTTTATCtgtgaaaagaaatattaatttaccTCCTtcacaaaatagatttttttgttgtttaagcAGACAAATCTAAGGATAGTTTGCAGTAAGACTTGTGTAGCTCATGCTACAACTATTACTTCAGTTCTTCTGAACCCACAGAACAGGTGTTTGTCACAAACAGAGTGGAACTGAACTGATGATTATCATatgattttacagttttacaacttttttgcctgttttttgtattactttcttcttttcttcactAATGTAGTGTCCTTCCAAAGCTTTA

Function

GO:

id name namespace
GO:0045954 positive regulation of natural killer cell mediated cytotoxicity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218204.1 True 1194 mRNA 0.37 6 18706828 18710010
XM_043218205.1 False 1122 mRNA 0.37 5 18706828 18710010

Neighbor

gene id symbol gene type direction distance location
LOC122324040 NA coding downstream 5480 18699138 ~ 18701348 (-)
LOC122323462 NA coding downstream 10549 18692749 ~ 18696279 (-)
si:ch211-133n4.6 NA coding downstream 36736 18667490 ~ 18670092 (-)
stm LOC107693247,LOC107669997,LOC107716562,LOC107734048 coding downstream 48793 18647220 ~ 18658035 (-)
si:ch211-80h18.1 LOC107693248,LOC107734011 coding downstream 65545 18625596 ~ 18641283 (-)
LOC122323424 NA coding upstream 1550 18711560 ~ 18718065 (-)
LOC122324125 NA coding upstream 9931 18719941 ~ 18721199 (-)
edn1 LOC107734027,LOC107681615,LOC107551767,LOC107669974,LOC107559691 coding upstream 51982 18761992 ~ 18766675 (-)
hivep1 LOC107734035,LOC107681619,LOC107551776,LOC107738951 coding upstream 56818 18766828 ~ 18819300 (-)
tmem170b tmem170b,LOC107669975,LOC107738955,LOC107681608,LOC107734028 coding upstream 140839 18850849 ~ 18861300 (-)
G134428 NA non-coding downstream 120502 18572068 ~ 18586326 (-)
G134426 NA non-coding downstream 173328 18533173 ~ 18533500 (-)
LOC122324145 NA non-coding downstream 174811 18523200 ~ 18532017 (-)
G134411 oxr1b non-coding downstream 245929 18457165 ~ 18460899 (-)
G134365 LOC107726654 non-coding downstream 288975 18417026 ~ 18417853 (-)
G134504 NA non-coding upstream 122222 18832232 ~ 18832849 (-)
G134592 NA non-coding upstream 337511 19047521 ~ 19057963 (-)
G134632 NA non-coding upstream 552708 19262718 ~ 19264297 (-)
LOC122323683 NA non-coding upstream 704889 19414899 ~ 19421472 (-)
G134675 NA non-coding upstream 782525 19492535 ~ 19493032 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other downstream 15579 18687349 ~ 18691249 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other downstream 465215 18225609 ~ 18241613 (-)
si:dkey-266f7.5 NA other downstream 518799 18169523 ~ 18188029 (-)
G134318 NA other downstream 695429 18010882 ~ 18011399 (-)
s100a10a s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278 other downstream 771392 17929689 ~ 17935436 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other upstream 166604 18876614 ~ 18933228 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other upstream 832772 19542782 ~ 19652807 (-)
LOC122324012 NA other upstream 960777 19670787 ~ 19688386 (-)
G134895 NA other upstream 1672010 20382020 ~ 20382727 (-)
G134944 LOC107756202,LOC107600825,LOC107689598 other upstream 1739543 20449553 ~ 20451196 (-)

Expression


Co-expression Network