LOC122324080


Basic Information

Item Value
gene id LOC122324080
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 14428903 ~ 14431551 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218279.1
atttatacacacttttCATAGTGACGGGTTGCCAAGTCCCTTTTGTTATGAGTataacaaatatgtttatttcaaCGCTAATAAACATATCGTACTTTATTCACCATGTAATGCATAACTACATTATAGtataataactgttttatatagtgtattatacataattttaaaacGACGACATTCATTATTATAACCAGCTCTATTAATCTAACAGAACTGATTTGTCGGTCATTCTTGGCAATACTTGGCAACCCGATAGTGTCTTTGAATCCGCGCGCGGGAATAACTACACAGCCACAGTGAGCAGGGGAGCTCGAGAAACTGTatgtaaactaaactaaaatataacattgtGAGTGATCAAATCGATCGTTAGCTTTGTTTATCATGAGGCTGTAAGCGTTTTAGGCAATTGCTTATCCCGAGAGGCTGGTTATTTGAGCGCGTGAGATTTGTAAACAATGAAATCCGCTAAGAACGCTAAAGTGAGACCCGCAGCATCAGCTAAAGAAGAAGAGTGTGGAATATGGCTCGACACAAAAgagttaaaagaaaagaaacaacagaaacagCAGACACGTCCAATATCCACATTACTGAACCCACTGGCGAGATCAGGGGGATACAGTGTGGCAGTCGCCCTCAGTTTCACTCAGACCAAACTCAACATGCCTGTCACTAGACAAAGCACTATATCAACCTTCTTTTCACCCAAATCCAGAGACCTTCCCCCGAGTGCTGGTGCGTCCAGTTCCATGCACACAGAGGCACACACCGGAGCCAAACGGAAACACGATTTCATTTTGGAGCCATCTACAGAGCCAGCCAGTCAAACATCTGATGTGTACTGTGATGAAGGTTTTGAAAGACTGTCGGCCAAGGACAAAAAAGAACAGTCTTTTCTCCATTTAATATGTGGTACTAATCCAGAAGAAGAGGAACCGCctcaaaaaaagagacatgttGTCCATTATGCAGAAAATGTGTCAGAGACGCAAGAATGTTGCAAAAAAGAAACTTCAAATGAATATACAAATCAGACGGTTCCTGAAACTGAGACCTTCTTTTGCAAGGATATGGTGGTCTGGAAGCCCTTTGAAGATGCACATAGGCATTTCCTTAAGTCTCCAGATCCTAAACACGCGAACAAACATGGTTTACGAGATCAGAAGGCCTCAGTTAAGGGCTCTATCTTAACTTCTAGGCCTGTCAATGAGAACCACAAGAGATTGAGTGCTTCTGTGAATATCGATAAAAGTCAGGAGCAGTCTTGGCATAAGAATAAAGCATCACCCATGAAACGGATTGGGAAGGAGAATAGGTGGTCTCCATCACCTATTAAAAGTCCAACGTGGCATTTTAAACACTGTCTAATTACCAGTCCAGCTAAATGCAGGTTGAAGGAGAAATGCACTTTTTCCCCAAAAAAGTTACGTGTGGAACCTGCAGACACAGAGATGGTTGGAGAACCCCTTTCTACGTTGTTCACTCAGGACTCGGAGGGCTTCTGTGTGATTGCTCACCGTGAGCAGCACTTAAAGAGCCCACTAATAGACCGGAGCAATTTATTTGTGGGCACAGGTGACGGGAATAATCCATCTGCTGCTTCTTTagaaaaagaggaggaggaatcCGATCTAGAGCCAGAGATGCTCTTCACCCAAGACTCAGAGGGAAACACGGTCATCAAGCATTAGCCAGAAACAGATGCTAAATACCACAAAACAACagaacactgttttttttaattattattattttagattttctttaaagctcttgatgtttttaaagctgtaattaaatatttgacacTTGAAATGAGCatccaataataaaaaaatcattttgtacaataaaccccaaaaatgatgtttgttattaaatattttataaatagtcATTGCTTGCCAGCAGATGGCACCATGAAGCTTTtactgtctgtgtgtggtgaATTACTTCAGCCCTGCTTGTAGAATCTGTGTATTTTAAAGTAGGACACAATATGTGACACGTTAAACATTTATACCAGCCGAGTACATGTAAGTTTAAAAGCtccatcatttttaattaatttatgttttgtattgcTTTAAACGACCAGCATGGAGCAAGGTGAATGCTTCACATTCTGTTCGCGTTTGCCAAGCTGATGATTCCCCATTGCTGCTCTGTTTAAATTTGCTGTCAGGGAAAGAATCTATGAGTTTCATTAAAGAGACAAGTGCTGGCAAAATCACtaatttttcatgcatttataataaatgccaTAGACTCCCAAATGTAATGATTCCCCTGCGAGGGACCCCTTCCTAAAATAGAAGTGCAGTTTGCTATAATTAATATCTTATGTGCACattttgactgacagctctaaTTTTTTAACAA

Function

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0051704 multi-organism process biological_process

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis
ko04115 p53 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218279.1 True 2388 mRNA 0.40 3 14428903 14431551

Neighbor

gene id symbol gene type direction distance location
ptdss1b ptdss1b,LOC107591967,LOC107706225,LOC107696537 coding downstream 42511 14377025 ~ 14386392 (-)
nup153 nup153,LOC107654713,LOC107706220,LOC107754277 coding downstream 52467 14363670 ~ 14376436 (-)
krit1 krit1,LOC107706222,LOC107591966,LOC107654714,LOC107754293,LOC107696538,LOC107592919 coding downstream 65634 14356731 ~ 14363269 (-)
eif3hb eif3h,eif3hb coding downstream 86594 14290541 ~ 14342309 (-)
trps1 trps1,LOC107706219,LOC107696539,LOC107754280,LOC107592043,LOC107562946 coding downstream 234162 14097094 ~ 14194741 (-)
ext1b extl1,ext1b,LOC107654722,LOC107754269,LOC107696533,LOC107592940,LOC101464589 coding upstream 63996 14495547 ~ 14561286 (-)
samd12 LOC107706238,LOC107591970,LOC107592942,LOC107654725 coding upstream 147411 14578962 ~ 14641514 (-)
abrab abrab,LOC107654682,LOC107706162,LOC107592087 coding upstream 212133 14643684 ~ 14646743 (-)
angpt1 angpt1,LOC107654726,LOC107706239,LOC107696520,LOC107754267 coding upstream 223725 14655276 ~ 14703548 (-)
sdc2 LOC107654728,LOC107591973,LOC107706240,LOC107592944,LOC107688380,LOC107754266 coding upstream 375188 14806739 ~ 14830515 (-)
G133016 rbm24a,LOC107696536,LOC107592929,LOC107706227,LOC107754275,LOC107654717,LOC107591968 non-coding downstream 81 14403518 ~ 14428822 (-)
LOC122324095 NA non-coding downstream 156185 14268267 ~ 14272718 (-)
G132852 NA non-coding downstream 867444 13561128 ~ 13561459 (-)
G132846 NA non-coding downstream 879152 13548740 ~ 13549751 (-)
G132837 NA non-coding downstream 900763 13527251 ~ 13528140 (-)
G133144 NA non-coding upstream 403901 14835452 ~ 14835861 (-)
G133143 NA non-coding upstream 404909 14836460 ~ 14837953 (-)
G133190 LOC107654743,LOC107706254 non-coding upstream 759254 15190805 ~ 15277403 (-)
G133226 NA non-coding upstream 952296 15383847 ~ 15384115 (-)
G133313 NA non-coding upstream 982424 15413975 ~ 15424498 (-)
G132785 NA other downstream 920450 13507664 ~ 13508453 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other downstream 926533 13494830 ~ 13502370 (-)
G132733 NA other downstream 1143442 13284531 ~ 13285461 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other downstream 1399554 13027817 ~ 13029349 (-)
sem1 NA other downstream 1759688 12597774 ~ 12669215 (-)
G133132 NA other upstream 352637 14784188 ~ 14784423 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other upstream 455977 14887528 ~ 14891918 (-)
G133217 NA other upstream 934883 15366434 ~ 15369736 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other upstream 1213311 15644862 ~ 15648579 (-)
G133373 LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391 other upstream 1228368 15659919 ~ 15660720 (-)

Expression


Co-expression Network