rpl14 (rpl14,LOC107710319,LOC107688416,LOC107654689,LOC107706260)


Basic Information

Item Value
gene id rpl14
gene name rpl14,LOC107710319,LOC107688416,LOC107654689,LOC107706260
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15376637 ~ 15378662 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218318.1
GAAGGCTCTTCATCGCAGAGCGGAAGTGCTTTAGTCCTTTTTCTACCACGGTCTGCCATCATGGTGTTCAAGCGTTTTGTCGAGATCGGCCGCGTTGCCTTTGTTGCATTCGGACCTTACGAAGGCAAACTAGTGGCAATTATAGATGTCATTGACCAAAACAGGGCACTGGTAGATGGCCCATGCACTGGAGTGAAGAGACAGTCTATGCCATTCAAGTGCTTGCAGCTCACTGACTACGTTATCAAAGTACCTCACGGTGCCCGTCAGAAGTACGTGAGGCGTGCCTGGGAAAAGGCAGAAGTCAACAAGAAGTGGGAAGAAAGCAGCTGGGCCAAGAAAATTGAGGCCAGAAAGAAGaGGGCCGCAATGTCTGACTTTGATCGCTACAAGGTTATGAAGGCCAAGAAAATGagGAACAGGATGATCAAGCACGAGGTGAAGAAGCTCAAGAAAGCTGCTGCACAAAAGAAAGCATAAACTTTAATAAACGTGTTTGACTTGTAAACTCGTAAA

Function

symbol description
rpl14 Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human RPL14 (ribosomal protein L14).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02875 RP-L14e, RPL14; large subunit ribosomal protein L14e

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218318.1 True 516 mRNA 0.47 6 15376637 15378662

Neighbor

gene id symbol gene type direction distance location
LOC122324119 NA coding downstream 13819 15360926 ~ 15362818 (-)
LOC122323517 ppce,LOC107654745,LOC107710331,LOC107602379,LOC108259106 coding downstream 84036 15280429 ~ 15292601 (-)
c19h1orf109 LOC107688373,LOC107754259,LOC107592951,LOC107654741,LOC107591985 coding downstream 418137 14956900 ~ 14958500 (-)
LOC122323565 clspn,LOC107706248,LOC107654737,LOC107754255 coding downstream 441568 14925718 ~ 14935069 (-)
LOC122323256 LOC107706246,LOC107654736,LOC107754261,LOC107688374,LOC107591981 coding downstream 452527 14921661 ~ 14924110 (-)
trnap-agg_22 NA coding upstream 6533 15385195 ~ 15385266 (-)
trak1b LOC107591988,LOC107710336,LOC107654751,LOC107688362,LOC107706145 coding upstream 47539 15426201 ~ 15439451 (-)
LOC122324175 cfap44,LOC107706146,LOC107580614,LOC107688389 coding upstream 60693 15439355 ~ 15454526 (-)
dync1li1 dync1li1,LOC107591989,LOC107654754,LOC107706262,LOC107688360,LOC107710339 coding upstream 118935 15497597 ~ 15509297 (-)
cspg5b LOC107748647,LOC107591995,LOC107710343,LOC107688356,LOC107602387,LOC107654760 coding upstream 179851 15558513 ~ 15577238 (-)
G133190 LOC107654743,LOC107706254 non-coding downstream 99234 15190805 ~ 15277403 (-)
G133143 NA non-coding downstream 538684 14836460 ~ 14837953 (-)
G133144 NA non-coding downstream 540776 14835452 ~ 14835861 (-)
G133016 rbm24a,LOC107696536,LOC107592929,LOC107706227,LOC107754275,LOC107654717,LOC107591968 non-coding downstream 947815 14403518 ~ 14428822 (-)
LOC122324095 NA non-coding downstream 1103919 14268267 ~ 14272718 (-)
G133226 NA non-coding upstream 5185 15383847 ~ 15384115 (-)
G133313 NA non-coding upstream 35313 15413975 ~ 15424498 (-)
G133315 NA non-coding upstream 101670 15480332 ~ 15481202 (-)
G133361 NA non-coding upstream 246663 15625325 ~ 15626280 (-)
G133370 LOC107710351,LOC107688346 non-coding upstream 293520 15672182 ~ 15673003 (-)
G133217 NA other downstream 6901 15366434 ~ 15369736 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other downstream 484719 14887528 ~ 14891918 (-)
G133132 NA other downstream 592214 14784188 ~ 14784423 (-)
G132785 NA other downstream 1868184 13507664 ~ 13508453 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other downstream 1874267 13494830 ~ 13502370 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other upstream 266200 15644862 ~ 15648579 (-)
G133373 LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391 other upstream 281257 15659919 ~ 15660720 (-)
evx1 evx1,LOC107688412,LOC107602371,LOC107710323,LOC107654696,LOC107748750,LOC107592093 other upstream 358285 15736947 ~ 15740329 (-)
npy LOC107592012,LOC107748754,LOC107656665,LOC107688404 other upstream 543561 15922223 ~ 15924285 (-)
mbpa mbpa,tshz1,LOC107563706,LOC107748691,LOC107592027,LOC107739558,LOC107696938,LOC107688322,LOC107593600,LOC107592029,LOC107696978,LOC107739556,LOC108429099 other upstream 902295 16280957 ~ 16508595 (-)

Expression


Co-expression Network