LOC122324119


Basic Information

Item Value
gene id LOC122324119
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15360926 ~ 15362818 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218334.1
GAGCGCAGGAGGGACACGGGCCACATTGGGAGAACCTGCTAGGCATCGTATTTGAAGGAAATCTCATTCTCTGTGGCATCTTTTACCGTTTTCTCTGCATCATGAAGTGCCTGATCACACGATTCTGGACATTGGCTCTGCTGGTCTCCCAGGCTcagATTGGTGTTTCAATGACTGTGCCAAATAGTGTGGCAACAACTGATGATACTTCAAATACATTTCCAACTTTTCTGTCAACAAGTGATGCAAGTTCAGCTACAAGCACAGATACAACCGCTGTGCCAACAATTGTAGATTCGACAGCTCAACCCACTCGTCCAACACTTGATACTTCACCCGCAATAACCCTAAAAACTTCAGCTGCATCTCGACCCACTGTGACGTTTGAATCAGATCCACCAACCACGTCTCCATCTTCCACCATGGGCTCTGCAGCGACCGAATTTTCAAGCAACACTACTAATACGACAATGATGACAAATACCACGACGGCAGGGAATGCCACGTtgacaacagaaaaacagaccTCAATTTGGACGACTCCATCATCCAGCGACTCGCTGACAGTCACCGCCATCAGCTATACTCTATCCATGCTGCTGTACGTGATCTTGAACTGAGCGCTACCTGAAATCAGCCCCGGACTAAAGAAAAGCATGACTGTTTTACAACCAACTCtagtatataattaatatataaaggtACAGactatatgtatacatttatatataaatgactaGTATATTAATGgtcattacatttacagtactATAAGACAAAACTAGTGTATTAGGTAATAGTTTAATTGATTGTTGTAATAACACAAGCTTAACAGCTCAACCTTAACAGCTTAAAAACTAGAAAATATTCTTGGTAACAAATAAACTCTATGCAtgaatttatgtaatttgtttttaaataatttttttgaacgAATGAGTTCAAGGAGTAAGAAGCGCAGACAATAAGTGTCCATACATACAAAGTGGCTTTATTAGCTTCCTTAAAACTGcatctaatatttaaaatgaaacatttatagtttaaaataaaaatgtctgaaattaaaaaaaaaaa

Function

GO:

id name namespace
GO:0009063 cellular amino acid catabolic process biological_process
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901606 alpha-amino acid catabolic process biological_process
GO:0046395 carboxylic acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0044282 small molecule catabolic process biological_process
GO:0042594 response to starvation biological_process
GO:0031667 response to nutrient levels biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process
GO:0009991 response to extracellular stimulus biological_process
GO:0016054 organic acid catabolic process biological_process
GO:0005102 signaling receptor binding molecular_function
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218334.1 True 1077 mRNA 0.39 2 15360926 15362818

Neighbor

gene id symbol gene type direction distance location
LOC122323517 ppce,LOC107654745,LOC107710331,LOC107602379,LOC108259106 coding downstream 68325 15280429 ~ 15292601 (-)
c19h1orf109 LOC107688373,LOC107754259,LOC107592951,LOC107654741,LOC107591985 coding downstream 402426 14956900 ~ 14958500 (-)
LOC122323565 clspn,LOC107706248,LOC107654737,LOC107754255 coding downstream 425857 14925718 ~ 14935069 (-)
LOC122323256 LOC107706246,LOC107654736,LOC107754261,LOC107688374,LOC107591981 coding downstream 436816 14921661 ~ 14924110 (-)
psmb2 psmb2,LOC107592948,LOC107688376,LOC107591978 coding downstream 445527 14907627 ~ 14915399 (-)
rpl14 rpl14,LOC107710319,LOC107688416,LOC107654689,LOC107706260 coding upstream 13819 15376637 ~ 15378662 (-)
trnap-agg_22 NA coding upstream 22377 15385195 ~ 15385266 (-)
trak1b LOC107591988,LOC107710336,LOC107654751,LOC107688362,LOC107706145 coding upstream 63383 15426201 ~ 15439451 (-)
LOC122324175 cfap44,LOC107706146,LOC107580614,LOC107688389 coding upstream 76537 15439355 ~ 15454526 (-)
dync1li1 dync1li1,LOC107591989,LOC107654754,LOC107706262,LOC107688360,LOC107710339 coding upstream 134779 15497597 ~ 15509297 (-)
G133190 LOC107654743,LOC107706254 non-coding downstream 83523 15190805 ~ 15277403 (-)
G133143 NA non-coding downstream 522973 14836460 ~ 14837953 (-)
G133144 NA non-coding downstream 525065 14835452 ~ 14835861 (-)
G133016 rbm24a,LOC107696536,LOC107592929,LOC107706227,LOC107754275,LOC107654717,LOC107591968 non-coding downstream 932104 14403518 ~ 14428822 (-)
LOC122324095 NA non-coding downstream 1088208 14268267 ~ 14272718 (-)
G133226 NA non-coding upstream 21029 15383847 ~ 15384115 (-)
G133313 NA non-coding upstream 51157 15413975 ~ 15424498 (-)
G133315 NA non-coding upstream 117514 15480332 ~ 15481202 (-)
G133361 NA non-coding upstream 262507 15625325 ~ 15626280 (-)
G133370 LOC107710351,LOC107688346 non-coding upstream 309364 15672182 ~ 15673003 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other downstream 469008 14887528 ~ 14891918 (-)
G133132 NA other downstream 576503 14784188 ~ 14784423 (-)
G132785 NA other downstream 1852473 13507664 ~ 13508453 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other downstream 1858556 13494830 ~ 13502370 (-)
G132733 NA other downstream 2075465 13284531 ~ 13285461 (-)
G133217 NA other upstream 3616 15366434 ~ 15369736 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other upstream 282044 15644862 ~ 15648579 (-)
G133373 LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391 other upstream 297101 15659919 ~ 15660720 (-)
evx1 evx1,LOC107688412,LOC107602371,LOC107710323,LOC107654696,LOC107748750,LOC107592093 other upstream 374129 15736947 ~ 15740329 (-)
npy LOC107592012,LOC107748754,LOC107656665,LOC107688404 other upstream 559405 15922223 ~ 15924285 (-)

Expression


Co-expression Network