LOC122324124 (LOC107706255,LOC107654747,LOC107591987,LOC107688367,LOC107710332)


Basic Information

Item Value
gene id LOC122324124
gene name LOC107706255,LOC107654747,LOC107591987,LOC107688367,LOC107710332
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15313857 ~ 15319770 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218343.1
TTTGACGGCCAGCATTTATAAAGAGCTTGACATCATTGACACACAAAGTTAGTCACACGTCTTCTGCGAGACAAgccacacacactttcacaggTTAGAAGACACAGAGAAGTTGATATAAACAGCTGTTTGAAGAGCATTCTGTTCATGGCAGAGATCTACAGTGGTGGCCACCTACACCACTTCATTGATGGCTACGATGTCCACCGCAGCAACTGGATGCGGTACGTCAACCCAGCGCGATCGCTGGCTGAACAGAACCTAGTGGCCTGTCAAAATGGCCAGGAGATCTTCTTCTACACCATCCGGCCCGTGGAGCCCAAGCAGGAGCTGTTGGTGTGGTACAGCCCAGAGTTCTCCCAGAGACTGTGCGGCCAGCAAGAGCAACCAGACAGCCTAAAGCCAAagTACATACCTGATATCGAGTATCAGAAGCAGCCCCTACCTCAGTACACCTACTACCCTAAACAGCCCCCGAGCCCACACAAACTTCACAGTGAGGGCCAGGAAGACGAGATGGATGAAAAGATTGACGTAGAGGTTATTGAGAGGGACACACCACCTGACACACCGGATGAACAGGTCGTGGATTTCAGCAAGAAGATCCAAGAAGCTGCTTCGCCAGAGCCTGTCCATTCTCCACATCCCAACCAGAAAGAGATTAACATAAGCATTCACCCATATCCCACCCTGTCCCCACCCCAAGACCTTCCGCTCCACTTACATGGCCTCTATGGTCATCGAGAAGGTCTGATCTCATACCCTTCATTGCCCTCACCTAGACCCCTGCAAGCTCCATATCCTTTATTACCACCATACAATCCTCATTATTCACGTTTGCTCTTGCCTCCATACTCCCCTCCCTTCCCTTCCATGTTGCCCCCAAAAGGGGGTCTCCGGTACAATGGATTCCTGGGCAGTGATGGGTTGCCCTATCCTTCCATACCCCAACCAGGTCTGTTACCAGTCACACTGCCCTATCCCACTCCGCTTAGTGGTGGTCTGAAGGAAAGAATCCCAAATACTCCACCCCGAGGAGCCCCTGCAACACCCGAACTCTCCCCTCAGCCAAAGCAGTCCCCTCAGCAAATGTTCCAGAAGCCTCTCTCTGAATGCGAAGAAGCCATCAACCTCAGCCTGGCAACACCCAAGAGCATGTCaccctcatcctcatcctctccACCGGCACCTGGGTACAAGTCTCTCCCGTACCCGCTCAAGAAGCAGAACGGCAAAATCAAGTATGAATGCAACATCTGTCTCAAGACCTTCGGTCAACTGTCCAACCTCAAAGTGCACTTGAGGGTCCACAGTGGAGAGAGGCCATTCCAGTGCAACTTGTGCAAAAAGAGTTTCACCCAACTTGCCCACCTACAGAAACATCACTTGGTCCACACAGGAGAGAAACCCCATGAGTGCCAGGTGTGCCACAAACGCTTCAGCAGCACCAGCAACCTGAAAACCCACCTACGCCTGCACTCCGGGGAGAAGCCATATCAGTGTAAGCTGTGCGGGGTGAAGTTCACTCAGTACATTCACCTCAAACTCCACCGTCGGCTGCACAGCTCTCGTGACCGGCCCCATTCCTGCCAAGCCTGCACTAGGGGCTTCATCCATCGCTTCTCACTGAACCTCCATCAGCGTTCTGGTTTCTGCCCCGCTGCCCGTCCTGAGATCCCGGAGCTGAGGCGAGCAGCAGAGCTCGTAGAGCGCTTTGATGCCAGTCAGGAGGCCGAGGCTCTGCCTGAGAGTGCTGGCGAGGCTCAGGTGGACGCTGCCTTGGAGAAGTGGCTGGCTAGAAGTTTGGAGAGCGGCGAGGGGAAGGAGGACATTGGATTCCTCAAGGCTATTGCTGCAGTACCTCATGGGGTAACCGCCATGGGTCATCACCAAGAGAGAGCCAGTGTGGTACACTTCAGCCACCGACCCTCTATAAAGACTGAAGAGGAGTAGATGAGCTAGAATATAACTTGTTCAGGTCTTCCATAAACCCAAAAAATTGCTATCTATGCACAGAGCATTCCCTAGTTGACACCAAAAATCCTCTCTTCCCTGGTAGTTTGAGAGATAAATTAGAAAGAAGATGCATAAACCAAGCCAATGAAAGCCGCACCAAACAAATAGTGTTTCCAAAGACTTGAAGATTGTGTCAAGTGATTGCACTTCCACCCTCTGACCTGTCATAAAATGAAGATGTGATTATAATGTCCTCATACTTCATATGGTTTTCAAACCAATGTGAAAGTTTATTTGTGTGAGTTTGTCTTAACttattatttttgagttttttcttaTTTGAGCACTGtatcaaatatttgtttatacgTGTACTTCTGTTTTTTATGTAtgacttaatgtttttttttcttattctacttttgtccttttaaaaaacaaatactgggATTCTCAGGAATAACGTGTTAATCCCACTATGGACACTATGTGACAGTCCCAGAAAGACTGGATTTTCCCGTCCATTCCATTTATCGTGGGTGCGAATGTGTATAGTATGAGTATGTGTGTATGATTTCTACCTGGTGTTAAAAAATTCTGGATGTGGTCCTTCATGAAAAgatataaaatgtgcaatcaGTATCTTTTCGAGGGACGATTCACTGTAGCTTCTAAGGATAATATAGCAGAAGACAATTTGTAGTTTTCTCTTAAACAAACCATTTTGACATTGGAAAGAGAACATGCCtcgcttttaatatttaaaaaaaaagagagaaatattcTTTGTTTTCTTAGTTTTATTGTTACTTGGTTGTGTCTACCAATGTTTACTGTTGTCTCTTTAATCCAAACAAGTATTGTTAGCACtatgaaaatgatcaaattgATGTAGCTGGAACTGATTTTGCCAATCATGAAGAttgcaatacttttttaaagactACAGAACTACAGACACAACAGTACCTCATACTAAAGAGTTAAATTGTTAGGttcatattttatactgttttaatttatttgatgtcAGCACTGGAAAAAGCAGGAACTAGATCCAAGTGCAGGATATTTGATTGTTAGCTACAAGCAGGGATTAGAAACAAGACTGTTCCATTACTTAGTGACTTTTTGTACAGTTCTTTTGTTATCCTAGTTTATTTTTGACTCAGTCCAAAAGATGTTGATACTTTATATGTGAGAACTTATTTTTGACAAACTTTTATAATGTAGCACATTAAACATTACTTGTCTAAGA

Function

NR:

description
PREDICTED: PR domain zinc finger protein 1-like isoform X2

GO: NA

KEGG:

id description
K24501 PRDM1; PR domain zinc finger protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218343.1 True 3214 mRNA 0.45 5 15313857 15319770

Neighbor

gene id symbol gene type direction distance location
LOC122323516 LOC107706254,LOC107654743,LOC107710329,LOC107688368,LOC107602377 coding upstream 37383 15232063 ~ 15276474 (+)
LOC122323313 ext1c,LOC107706241,LOC107654729,LOC107592050,LOC107754264,LOC107592945,LOC107688378 coding upstream 87174 15211167 ~ 15226683 (+)
cdca8 cdca8,LOC107591982,LOC107592949,LOC107654740,LOC107754257,LOC107688370 coding upstream 352287 14958607 ~ 14961570 (+)
cldn35 LOC107591984,LOC107654683,LOC107592950,LOC107754258,LOC108430542 coding upstream 356912 14953377 ~ 14956945 (+)
ago4 LOC106511154,LOC107591980 coding upstream 362185 14935159 ~ 14951672 (+)
crybg2 LOC107654746,LOC107706257,LOC107592054 coding downstream 7897 15327667 ~ 15350247 (+)
sgo1 LOC107654748,LOC107706259,LOC107688364,LOC107592057,LOC107578328,LOC107602351,LOC107710334 coding downstream 51534 15371304 ~ 15376482 (+)
trnap-agg_21 NA coding downstream 59700 15379470 ~ 15379541 (+)
LOC122324102 LOC107654690,LOC107706166,LOC107592089,LOC107602352 coding downstream 60867 15380637 ~ 15384405 (+)
topaz1 topaz1,LOC107706144,LOC107736171 coding downstream 69230 15389000 ~ 15398843 (+)
G133109 ppce,LOC107602379,LOC107688393,LOC107706142,LOC107592053,LOC107654745,LOC107710331 non-coding upstream 32853 15196057 ~ 15281004 (+)
LOC122324050 NA non-coding upstream 278435 15022275 ~ 15035422 (+)
G133068 NA non-coding upstream 555881 14757624 ~ 14757976 (+)
G132916 NA non-coding upstream 731441 14175839 ~ 14582416 (+)
G132913 trps1,LOC107706219,LOC107592043,LOC107754280,LOC107696539,LOC107562946 non-coding upstream 1145373 14168095 ~ 14168484 (+)
G133129 NA non-coding downstream 54730 15374500 ~ 15378019 (+)
G133253 NA non-coding downstream 140568 15460338 ~ 15460706 (+)
G133256 NA non-coding downstream 162228 15481998 ~ 15483517 (+)
G133265 NA non-coding downstream 229074 15548844 ~ 15549137 (+)
G133276 NA non-coding downstream 263435 15583205 ~ 15606585 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other upstream 101427 14787544 ~ 15212430 (+)
LOC122323518 LOC107654743,LOC107688368,LOC107602377,LOC108413484,LOC107706254,LOC107710329 other upstream 121291 15078454 ~ 15192566 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other upstream 475888 14834601 ~ 14837969 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other upstream 1977108 13309427 ~ 13336749 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other upstream 2287831 13021417 ~ 13026026 (+)
anxa14 LOC107706258,LOC107654687,LOC107710308,LOC107592054,LOC107688418 other downstream 35838 15355608 ~ 15361845 (+)
cckb cck,LOC107592091,LOC107654691,LOC107706167,LOC107688363 other downstream 101365 15421135 ~ 15424497 (+)
G133266 LOC107748647,LOC107591995 other downstream 249894 15569664 ~ 15577981 (+)
aste1b aste1,LOC107654763,LOC107688353,LOC107710346,LOC107580865 other downstream 300489 15620259 ~ 15626187 (+)
hoxa5a hoxa5a,LOC107654773,LOC107592096,LOC107710354,LOC107688408,LOC107602374,LOC107748660 other downstream 454902 15774672 ~ 15776784 (+)

Expression


Co-expression Network