CI01000001_06948672_06949034


Basic Information

Item Value
gene id CI01000001_06948672_06949034
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 6948586 ~ 6949034 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_06948672_06949034.mRNA
GTATAAATTCAAGCCAGCGGGAAGAGAAAAGTCAATGCTTATCACTTCTCGACTGTGAACATTGAGGAACGACGCAGTCCTTCATCATGAGAGATCTGCAGAAAACGTGTAAAATGATGAGTCTGGAGAGGAAATGCTCAGATGGTGTAGAGCAGATGATGGGTGTTCTGGAGCAGCGGCTGCACAACCCTGTCTCTCCCACTGACTTATGGGAAAAAACGGTCTCTTTCTTCACCCCAAAGAAGACCTTGCTCTTCCACAATGGATACTCCAAGTATTCGAGGGAGACACTTCGCTTATTCCCAGACTCAGCAGAAGATGTGGCTCCTCTGTGTATTCAGCAGTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_06948672_06949034.mRNA True 347 mRNA 0.47 2 6948586 6949034

Neighbor

gene id symbol gene type direction distance location
CI01000001_06939316_06939879 NA coding upstream 7881 6939233 ~ 6940705 (+)
CI01000001_06921000_06929478 TAS1R1 coding upstream 18227 6921000 ~ 6930359 (+)
CI01000001_06893068_06917387 IFFO2A coding upstream 31178 6893068 ~ 6917660 (+)
CI01000001_06884020_06889266 UBR4 coding upstream 58594 6884020 ~ 6889992 (+)
CI01000001_06825263_06835397 EMC1 coding upstream 112123 6825263 ~ 6836463 (+)
CI01000001_06956478_06959048 NA coding downstream 6465 6955499 ~ 6959620 (+)
CI01000001_06960133_06963752 ICMT coding downstream 11099 6960133 ~ 6964430 (+)
CI01000001_06981183_06981774 RPL22 coding downstream 32149 6981183 ~ 6981804 (+)
CI01000001_06996957_07040074 NA coding downstream 47923 6996957 ~ 7040081 (+)
CI01000001_07045345_07052918 IGSF21B, IGSF21 coding downstream 96311 7045345 ~ 7052970 (+)
G16937 NA non-coding upstream 2435 6936142 ~ 6946151 (+)
G16317 NA non-coding upstream 148205 6800168 ~ 6800381 (+)
CI01000001_06718133_06747744 KCNAB2.L, KCNAB2A, KCNAB2B, KCNAB2 non-coding upstream 215661 6717159 ~ 6747744 (+)
G16284 NA non-coding upstream 275075 6672182 ~ 6673511 (+)
G16977 NA non-coding downstream 142719 7091753 ~ 7123993 (+)
G17019 NA non-coding downstream 203060 7152094 ~ 7152425 (+)
G16970 NA non-coding downstream 330209 7279243 ~ 7284904 (+)
G17057 NA non-coding downstream 367630 7316664 ~ 7319030 (+)
G17061 NA non-coding downstream 374252 7323286 ~ 7323615 (+)
G15995 NA other upstream 1233635 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 1658630 5279837 ~ 5287698 (+)
G15794 NA other upstream 1883882 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 3327135 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 5277582 1667762 ~ 1671167 (+)
CI01000001_07531945_07539781 NA other downstream 583538 7531541 ~ 7540586 (+)
G17234 NA other downstream 1083090 8032124 ~ 8032483 (+)
G17353 NA other downstream 2266988 9216022 ~ 9228859 (+)
G17354 NA other downstream 2285429 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 2469294 9435836 ~ 9436373 (+)

Expression


Co-expression Network