naxe (apoa1bp,naxe,LOC107753479,LOC107693306,LOC107669985)


Basic Information

Item Value
gene id naxe
gene name apoa1bp,naxe,LOC107753479,LOC107693306,LOC107669985
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 18420659 ~ 18423692 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218452.1
GATATTGTTCATATACTGAGTTTCAGCAGCAGAGGTCTGCAAGTACGTTATTTATTCTCTATTCTATACGTTTTTATTCTGCCGGCGGTGTCTTGGGCATTTTTTGGTGTTAACGAATGTTAAAGAGCGTTTGACCTTAACATTGCTAAGAGGAGCTTAAGCCAGGTGAATGTTGGGAGTTCGAGCCCTGTTTGGCATCGGTCTTCTCGTGACGTCGCGAGGAGTCTCCGTCCTGACCCATACAGGAGCATGCGCGCGTGTTGCCAGCGACATCTACACTAAAGATCTCGCTCACAGACAGGCTTGCACCATGGCCAATACAATCAAGTACCTGGGCCAAGAAGAGGCTCAGCACATTGACGAGGAGCTGTTCAACGAGTACAGCTTCAGTGTGGATCAGTTAATGGAGCTGGCCGGTCTCAGCTGTGCCTCAGCTGTGTCAAAGGGCTATCCTGTGCAATCGCTGCTCAAGAGCACACCTAGAGTCCTGGTGATCTGTGGACCGGGAAATAACGGAGGCGATGGGTTGGTTTGTGCTAGACATCTCAAACTGTTTGGATATGAGCCTTCCGTATTGTACCCAAAGCGCCCCAGCAAACAGCTGTTCCAGAATCTTACCACCCAGTGTGAGAAGATGGATATATCCTTCCTGACAGAGATGCCTGAGGCTGATGTGATTGATGAAGTGTATAATTTGGTGGTGGACGCCATCTTTGGATTCAGTTTTAAGGGTGCTGTGCGAGAGCCTTTCGGCGACATCCTCTCCCAGCTGAAGAAGATAACCGTGCCCATTGCTAGCGTTGACATACCTTCAGGTTGGGATGTGGAGAACGGCTGTCCTGACGGGATTCAGCCTGACATGCTCATCTCCCTCACGGCCCCTAAGAAAGCAGCCAATCACTTCAAAGGACGCTACCACTTCCTGGGAGGACGCTTCGTTCCTCCTGCGCTTGAGCAGAAGCACCAACTGAATCTGCCTCAATACCCGGGCACTGACTGTGTTTATCAGCTGAACTGAGCATTAAGCCCTTCAACTCCTTTTTGTGCGTTTGATTAAAACAACTACAATAACTGTAGATATGGATTAATCGGCATCAGTCAGCAATTGTGCAACTGCTTATTGCCGAGCATTGTTTCAGAATGTTTCGGAGGAATCGCTCTAGTTAGTTATGTCTGAATTTATAAAAgtatcaaattaaaatggatATTTAGGTTTTGACGTTTGACAAAGCCTGAATAATTACTGCA
>XM_043218453.1
AAGTTCAAGAACCCGGATATTGTTCATATACTGAGTTTCAGCAGCAGAGGTCTGCAAGAGCTTAAGCCAGGTGAATGTTGGGAGTTCGAGCCCTGTTTGGCATCGGTCTTCTCGTGACGTCGCGAGGAGTCTCCGTCCTGACCCATACAGGAGCATGCGCGCGTGTTGCCAGCGACATCTACACTAAAGATCTCGCTCACAGACAGGCTTGCACCATGGCCAATACAATCAAGTACCTGGGCCAAGAAGAGGCTCAGCACATTGACGAGGAGCTGTTCAACGAGTACAGCTTCAGTGTGGATCAGTTAATGGAGCTGGCCGGTCTCAGCTGTGCCTCAGCTGTGTCAAAGGGCTATCCTGTGCAATCGCTGCTCAAGAGCACACCTAGAGTCCTGGTGATCTGTGGACCGGGAAATAACGGAGGCGATGGGTTGGTTTGTGCTAGACATCTCAAACTGTTTGGATATGAGCCTTCCGTATTGTACCCAAAGCGCCCCAGCAAACAGCTGTTCCAGAATCTTACCACCCAGTGTGAGAAGATGGATATATCCTTCCTGACAGAGATGCCTGAGGCTGATGTGATTGATGAAGTGTATAATTTGGTGGTGGACGCCATCTTTGGATTCAGTTTTAAGGGTGCTGTGCGAGAGCCTTTCGGCGACATCCTCTCCCAGCTGAAGAAGATAACCGTGCCCATTGCTAGCGTTGACATACCTTCAGGTTGGGATGTGGAGAACGGCTGTCCTGACGGGATTCAGCCTGACATGCTCATCTCCCTCACGGCCCCTAAGAAAGCAGCCAATCACTTCAAAGGACGCTACCACTTCCTGGGAGGACGCTTCGTTCCTCCTGCGCTTGAGCAGAAGCACCAACTGAATCTGCCTCAATACCCGGGCACTGACTGTGTTTATCAGCTGAACTGAGCATTAAGCCCTTCAACTCCTTTTTGTGCGTTTGATTAAAACAACTACAATAACTGTAGATATGGATTAATCGGCATCAGTCAGCAATTGTGCAACTGCTTATTGCCGAGCATTGTTTCAGAATGTTTCGGAGGAATCGCTCTAGTTAGTTATGTCTGAATTTATAAAAgtatcaaattaaaatggatATTTAGGTTTTGACGTTTGACAAAGCCTGAATAATTACTGCA

Function

symbol description
naxe Predicted to enable NADHX epimerase activity. Predicted to act upstream of or within lipid transport. Predicted to be located in extracellular region. Predicted to be active in mitochondrion. Orthologous to human NAXE (NAD(P)HX epimerase).

NR:

description
NAD(P)H-hydrate epimerase-like isoform X1

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005739 mitochondrion cellular_component
GO:0046872 metal ion binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016853 isomerase activity molecular_function

KEGG:

id description
K17759 NAXE, nnrE; NAD(P)H-hydrate epimerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218452.1 True 1248 mRNA 0.48 7 18420659 18423677
XM_043218453.1 False 1153 mRNA 0.48 7 18420659 18423692

Neighbor

gene id symbol gene type direction distance location
sf3b4 sf3b4,LOC107669988,LOC107716574 coding downstream 4356 18414224 ~ 18416303 (-)
mindy1 fam63a,LOC107559718,LOC107669987,LOC107693308,LOC107589430,LOC106569905 coding downstream 16913 18394006 ~ 18403746 (-)
mrpl24 mrpl24,LOC107669969,LOC107559719,LOC107693309,LOC107580210 coding downstream 37480 18381451 ~ 18383179 (-)
prcc LOC107753464,LOC107693312,LOC107589427,LOC107670020,LOC107716568,LOC107577543 coding downstream 40093 18376016 ~ 18380566 (-)
pbxip1a LOC107589426,LOC107729890,LOC107693313,LOC107716591 coding downstream 48408 18352984 ~ 18372251 (-)
sqleb NA coding upstream 44286 18467978 ~ 18471674 (-)
recql4 recql4,LOC107589489,LOC106570431 coding upstream 58962 18482654 ~ 18493910 (-)
limd1b LOC107578185,LOC107669936,LOC107716566,LOC107753472,LOC107693300,LOC107731694 coding upstream 70408 18494100 ~ 18495558 (-)
clec3bb NA coding upstream 83003 18506695 ~ 18511505 (-)
exosc7 exosc7,LOC107693297,LOC107670021 coding upstream 87958 18511650 ~ 18514678 (-)
G134365 LOC107726654 non-coding downstream 2806 18417026 ~ 18417853 (-)
G134332 NA non-coding downstream 117002 18290057 ~ 18303657 (-)
G134334 NA non-coding downstream 151599 18268305 ~ 18269060 (-)
G134319 NA non-coding downstream 402397 18017969 ~ 18018262 (-)
G134317 NA non-coding downstream 454120 17965575 ~ 17966539 (-)
G134411 oxr1b non-coding upstream 33473 18457165 ~ 18460899 (-)
LOC122324145 NA non-coding upstream 99508 18523200 ~ 18532017 (-)
G134426 NA non-coding upstream 109481 18533173 ~ 18533500 (-)
G134428 NA non-coding upstream 148376 18572068 ~ 18586326 (-)
G134504 NA non-coding upstream 408540 18832232 ~ 18832849 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other downstream 179046 18225609 ~ 18241613 (-)
si:dkey-266f7.5 NA other downstream 232630 18169523 ~ 18188029 (-)
G134318 NA other downstream 409260 18010882 ~ 18011399 (-)
s100a10a s100a10a,LOC107599503,LOC107693282,LOC107589481,LOC107589504,LOC103356278 other downstream 485223 17929689 ~ 17935436 (-)
LOC122324164 LOC107589398,LOC107693356,LOC107724088,LOC107589397,LOC107599520,LOC107665487,LOC107724089 other downstream 804382 17613446 ~ 17616277 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other upstream 263657 18687349 ~ 18691249 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other upstream 452922 18876614 ~ 18933228 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other upstream 1119090 19542782 ~ 19652807 (-)
LOC122324012 NA other upstream 1247095 19670787 ~ 19688386 (-)
G134895 NA other upstream 1958328 20382020 ~ 20382727 (-)

Expression


Co-expression Network