LOC122324196


Basic Information

Item Value
gene id LOC122324196
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 1604392 ~ 1605197 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218460.1
ATTCAAAGCACTCCGCAAGATGAAATTCCAGGTTTTTCATCTCTCTTCCACTCTTCAAACCACTCTCTTTTTCTTGCTGGTGCTGCTGGTCCAGCCTCCCAGAGGTCTAATGTTGCCCCACCATCCCATGGTTTACCTGCCTACACTGGACAACCCTGAGTGGGAGGCTGCACTTCTCCAGCTTCAGGCTTTGCTGGGAGCTCCAGGTGGCAGAGCAGCAGGCGAGTTCAAACCCTGGGCTCTGGTTGAGGAGCCAGACTCTGAGGAGCATTTGGAGAGAGCAGAGGCAGAGCTGGGGTGGGGACAGAGGAGCACCGTCAAGGGCCAGAAGAGAGAGGAGCTGGGACGGAGACCAGTCGGGACATTCCCAGACAACCATATAGTGGCTGTTCCTTATCCACAGGGAGgagaggtggaggaggaggagggtggAGAGAAGAGGAACGAGGCACTCACTTCCATTGCAGGAGGTCTGCAAGCCTTTAATAGACAGAAAGGAGGATTTGGCTTTCGATTTGGCAGAAAGTGAAGGGGTAgtgcatgcgtgcgtgtgtgtgagtggattATTTACATAGCTATACTTTGGAGACAAAATTTTCTCTATAAGTGAGCTTATCTAAATCTTTGGGATTGTCCTTTGAAAATTGTGGGGTGTGCAtaacataaataatgtttatgggAAAAGTGCAGattatatgacatttatt

Function

GO:

id name namespace
GO:0007267 cell-cell signaling biological_process

KEGG:

id description
ko04724 Glutamatergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218460.1 True 707 mRNA 0.50 2 1604392 1605197

Neighbor

gene id symbol gene type direction distance location
LOC122323435 cenpa,LOC107670695,LOC107563210,LOC107717728,LOC107565247,LOC107700648,LOC108274877,LOC105890381 coding upstream 6072 1593994 ~ 1598320 (+)
psmb10 zgc:92791,LOC107565228,LOC107700647,LOC107719854,LOC107670694,LOC107563209 coding upstream 29269 1567958 ~ 1575123 (+)
gja4 LOC107563282,LOC107664709,LOC107712627,LOC107698984,LOC107555947,LOC107726142 coding upstream 345568 1254323 ~ 1258824 (+)
ilf2 ilf2,LOC105924049,LOC107722161 coding upstream 488193 1112499 ~ 1116199 (+)
smap2 smap2,LOC107722153,LOC107670000,LOC107712765,LOC107698993 coding upstream 882078 706313 ~ 722314 (+)
LOC122323558 LOC107565238,LOC107700642,LOC107717719,LOC107563205,LOC107727042 coding downstream 902 1606099 ~ 1611954 (+)
LOC122323560 NA coding downstream 7616 1612813 ~ 1620460 (+)
ints8 ints8,LOC107717725,LOC107719852,LOC107565239 coding downstream 21571 1626768 ~ 1645421 (+)
top2b LOC107717721,LOC107700653,LOC107719851,LOC107655887,LOC107563214 coding downstream 69544 1674741 ~ 1698889 (+)
nkiras1 nkiras1,LOC107655880 coding downstream 382124 1987321 ~ 1990909 (+)
G129743 NA non-coding upstream 71387 1532566 ~ 1533005 (+)
G129701 NA non-coding upstream 337382 1266709 ~ 1267010 (+)
G129675 thsd7aa,LOC107670038,LOC107566934,LOC107555944,LOC107698991 non-coding upstream 641532 957018 ~ 962860 (+)
G129668 NA non-coding upstream 785901 818223 ~ 818491 (+)
LOC122323300 NA non-coding upstream 865634 723325 ~ 738758 (+)
G129795 NA non-coding downstream 95391 1700588 ~ 1704532 (+)
G129881 NA non-coding downstream 451208 2056405 ~ 2056882 (+)
G129886 NA non-coding downstream 477081 2082278 ~ 2082620 (+)
G129916 NA non-coding downstream 660020 2265217 ~ 2265435 (+)
G129936 NA non-coding downstream 737838 2343035 ~ 2343239 (+)
G129682 LOC107664710 other upstream 497819 1072151 ~ 1106573 (+)
LOC122323556 LOC107717722,LOC107700644,LOC107565248 other downstream 52061 1657258 ~ 1672784 (+)
thrb thrb,LOC107743925,LOC107719848,LOC107700654,LOC106588669 other downstream 264961 1870158 ~ 1965690 (+)
LOC122323678 NA other downstream 361543 1966740 ~ 1973384 (+)
ppp1r8a ppp1r8a,LOC107690919,LOC107732917,LOC107708698,LOC108441741,LOC108272406,LOC105903676 other downstream 529455 2134652 ~ 2141332 (+)
G129993 NA other downstream 1180728 2785925 ~ 2786348 (+)

Expression


Co-expression Network