LOC122324215


Basic Information

Item Value
gene id LOC122324215
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5531960 ~ 5532887 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218491.1
TGTGACTACGGGAAAGCCACTCAAAAATGTCTGAGAATATTTATGGAAATATAAACAATGATGGATAATGGGATGTGGACAGATGCACCGAGGGACACCAAACACCTCAACGCACagGTTGTTACTCAGTGAAGCTCAGAAGCTCCAGAGCAGCTGCAGTGTGTTTGTCGCTGGTGTGTGTTCTTCTTATGATCGCAGTCATAGCGTTGTGTGTCTGCATTCATACAAAGAACACAAACTGCACAGAAGAGTCACACCAGCTATTAATCaacctcacagaagagagagaccTGCTTCTAACAAAGTACATAAACATGATGAATGAAACGACTGAATTATTAATCAAGAACGACAACCTGACTAAACAAAGAGACCAGTTTAATCAAGAGAGAGATCAACTGCAGAAGTTTCTCACTGAAACAGAAGCATGGTTTCACTCTGACTTCGGCTTTTACTTCATTTCTTCACTGAAGAAGAGCTGGAACGAGTGCAGAAGATACTGTACAGAGAGAAAAGCGGATCTGATCACCATAAAGAACAAAGAGAAACAAGATTTTGTCAAAAACAATACTGGTGAAAGACAATTATGGATTGGTGTGACTGACGAAGAGAAAGAGGGCATATGGAAATGGGTTGATGGCACCAGCGTGATCTCTGGGTGAGAAGTCACTGAACTGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218491.1 True 680 mRNA 0.42 4 5531960 5532887

Neighbor

gene id symbol gene type direction distance location
eya3 eya3,LOC107738590,LOC107731567,LOC107672865,LOC107702484 coding upstream 31364 5484922 ~ 5500596 (+)
si:ch211-195b13.1 si:ch211-195b13.1,LOC107738591,LOC107672866,LOC107702504,LOC107731568,LOC103036792,LOC108411161 coding upstream 48292 5471782 ~ 5483668 (+)
LOC122323295 NA coding upstream 107172 5407049 ~ 5424788 (+)
si:dkeyp-92c9.2 si:dkeyp-92c9.2,LOC107598237,LOC107571465,LOC107738595,LOC107731579,LOC107672824,LOC107702702 coding upstream 178700 5344211 ~ 5353260 (+)
thbs3b thbs3b,LOC107598217,LOC107672882,LOC107702531,LOC107738600,LOC105901446 coding upstream 189246 5330425 ~ 5342714 (+)
LOC122323836 LOC107598234 coding downstream 36843 5569730 ~ 5571271 (+)
LOC122323266 NA coding downstream 80181 5613068 ~ 5614130 (+)
rpa3 rpa3,LOC107754810,LOC107598208,LOC107672835,LOC107731561,LOC107702426,LOC107568286 coding downstream 183809 5716696 ~ 5717681 (+)
col28a1a col28a1,LOC107754784 coding downstream 192481 5725368 ~ 5739185 (+)
LOC122323385 sdhaf3,LOC107702681 coding downstream 343163 5876050 ~ 5882974 (+)
G130813 LOC107672812,LOC107598225,LOC107571454,LOC107738589,LOC107672867,LOC107731566,LOC107571461 non-coding upstream 26546 5503266 ~ 5505414 (+)
G130664 NA non-coding upstream 126394 5404453 ~ 5405566 (+)
G130676 NA non-coding upstream 145843 5382816 ~ 5386117 (+)
G130677 NA non-coding upstream 146412 5385136 ~ 5385548 (+)
G130665 NA non-coding upstream 174866 5356870 ~ 5357094 (+)
G130833 NA non-coding downstream 15620 5548507 ~ 5548799 (+)
G130835 NA non-coding downstream 32493 5565380 ~ 5587515 (+)
LOC122324017 NA non-coding downstream 78101 5610988 ~ 5612338 (+)
G130855 NA non-coding downstream 81377 5614264 ~ 5632428 (+)
G130858 rims3,LOC107672861,LOC107598211,LOC107702460,LOC107731575,LOC107571463 non-coding downstream 126646 5659533 ~ 5670532 (+)
G130640 txnipa,txnip,LOC108410889,LOC107672857,LOC107738596 other upstream 217782 5223700 ~ 5314178 (+)
LOC122324077 NA other upstream 303734 5225081 ~ 5228226 (+)
LOC122323259 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other upstream 352283 5176270 ~ 5179677 (+)
G130637 NA other upstream 368561 5162586 ~ 5163399 (+)
G130613 LOC107745035,LOC100705094,LOC102198470,LOC101485383,LOC107563920,LOC102785635 other upstream 548716 4977885 ~ 4983244 (+)
LOC122324139 LOC107598234,LOC107672810 other downstream 50618 5583505 ~ 5585655 (+)
LOC122323254 sdhaf3,LOC107702681 other downstream 212914 5745801 ~ 5752917 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other downstream 252243 5785130 ~ 5922973 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other downstream 838948 6371835 ~ 6401298 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other downstream 930196 6463083 ~ 6488760 (+)

Expression


Co-expression Network