LOC122323456


Basic Information

Item Value
gene id LOC122323456
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12831641 ~ 12834525 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247014.1
AATTTCCATGACATTTCCACCTGCACACACATTGTTTAGTGACAGCTTGTCCCGATTATATCTCATTAGTCATCGGGAAGCGTGTCTGGAGAGGCTGCAGGTCAGTGGATGTCATGACTTTGGAATGAAGTTCAGTGGGGAATGATCCCTGTCATCAGACCAGCTGCAGGGCTCGGACAAGTGTTTTTCAGCCCCTTGCCATCAATAGAGGGCAGTACTGAGCAGTACTGTGTGAAGTCTCCTGCTAAGTGGTTCTTGACGGACAGATCCATCTGATATGTCCTGTTAAGTCAAGCTGTCTCAGGTCCAGGTATGCTGATGATGGTCCCTCCCAAAAATACCATGACCCCGACACCCCTCGTGAAGGTATGTGCCTACAGGACATCACTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247014.1 True 393 lncRNA 0.49 3 12831641 12834525

Neighbor

gene id symbol gene type direction distance location
gatad2b gatad2b,LOC107593536,LOC107706168,LOC107731554,LOC107591599,LOC107696601 coding upstream 1842 12793977 ~ 12829799 (+)
si:ch211-57n23.4 si:ch211-57n23.4,LOC108424704,LOC107593575,LOC107670070,LOC107722127,LOC107731740,LOC107665655 coding upstream 70513 12739597 ~ 12761128 (+)
crtc2 LOC107722160,LOC107593533,LOC107669709,LOC107665671,LOC107731562,LOC107591598 coding upstream 95124 12728466 ~ 12736517 (+)
ago2 ago2,LOC107722143,LOC107593532,LOC107591597 coding upstream 105275 12707267 ~ 12726366 (+)
dlx6a dlx6,dlx6a,LOC107670195,LOC107665661,LOC107731570,LOC107722133 coding upstream 131030 12698137 ~ 12700611 (+)
tinagl1 tinagl1,LOC107706169,LOC107593537,LOC107669690,LOC107731519,LOC107696600,LOC107591600 coding downstream 7857 12842382 ~ 12862088 (+)
si:ch211-13c6.2 LOC107706172,LOC107593539,LOC107669634,LOC107731497,LOC107696596 coding downstream 108949 12943474 ~ 12952055 (+)
nfyc nfyc,LOC107593541,LOC107696595,LOC107591605,LOC107731465 coding downstream 117932 12952457 ~ 12973516 (+)
LOC122324201 kcnq4,LOC107593542,LOC107706174,LOC107591607 coding downstream 145550 12980075 ~ 13021049 (+)
anp32e anp32e,LOC107706176,LOC107669588,LOC107731392,LOC107696590 coding downstream 219232 13053757 ~ 13059310 (+)
G132472 NA non-coding upstream 163087 12667293 ~ 12668554 (+)
G132448 NA non-coding upstream 274439 12556964 ~ 12557202 (+)
G132421 sgce,LOC107722147,LOC107731676,LOC107665667 non-coding upstream 331100 12499142 ~ 12500541 (+)
G132376 NA non-coding upstream 434280 12378273 ~ 12397361 (+)
G132541 psmb4,LOC107593590,LOC107669568,LOC107706179 non-coding downstream 267424 13101949 ~ 13102925 (+)
G132547 LOC107591615,LOC107696587,LOC107731336,LOC107696584,LOC107552275 non-coding downstream 284191 13118716 ~ 13123966 (+)
G132549 NA non-coding downstream 291352 13125877 ~ 13126617 (+)
G132755 klhl43,LOC107706211,LOC107589442,LOC107742826,LOC107696549,LOC107591641 non-coding downstream 677083 13511608 ~ 13512971 (+)
G132754 klhl43,LOC107589442,LOC107706211,LOC107742826,LOC107591641,LOC107696549,LOC108426671 non-coding downstream 678497 13513022 ~ 13513896 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other upstream 406563 12423290 ~ 12425078 (+)
LOC122323774 NA other upstream 718744 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 1307760 11522229 ~ 11523881 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 2413545 10415640 ~ 10418096 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 3078085 9734220 ~ 9753556 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 186892 13021417 ~ 13026026 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 474902 13309427 ~ 13336749 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 1953019 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 2000076 14834601 ~ 14837969 (+)
LOC122323518 LOC107654743,LOC107688368,LOC107602377,LOC108413484,LOC107706254,LOC107710329 other downstream 2243929 15078454 ~ 15192566 (+)

Expression


Co-expression Network