LOC122323683


Basic Information

Item Value
gene id LOC122323683
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 19414899 ~ 19421472 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247047.1
TGGCATTTCTGGACGTGATCCCAAATCATGCTTATGACACCATCGGTCTGAGAGACGCCGCAGCTCGGGCTGAACCTGCGTGAGTGCGCGGCAGTAATCGTATCTAATGGCCTCTTCCCGCACAACAGGTTGTGATCAATTTAATGAAGATGCATCAAggcatttttttatgaaatatgcagTGTGCGTCTAGAAAGTGAACTGCCATATCGCCAGTGAGTCTGCAGTTTTAAGGACGTTCCATCAGCGGGGAGCAAAGAAGCAGAACTTCCTGGCTCTAAATCcgAACTGCACAATGCATACGTTTGTACCATGCTGGTTGTCAGACAGGAAGTAATCCAGCGGACATTGGCCTTAACCTCTTAATTTGAGTCATGGTCTGAAATCGTTCAATAAACACTCAGAAAGTCATTCGGTGAGTCACAAGCTTCCTTGTATTCAGTTAAGATGCTGCTTTGCCTTCTTTGAAGGTGTTTTCCTGCTCATTCAGAGCTCATTGCAACATTTATGAAAGGTTGATAttatataaatctattaaaatgcattttaatacagcacaacattttgcacattttgaaaCAGAATTCAATAACCCCAAGCACAAAAGAAGAATCCATCTTAGTCTCCGCATTGCCAAAGACAAATAATGTATGCAACAACTAGTTCAGTGATTCTGCCTAGAAAAGCTTAAAAAACCGCTGACTCTGCTCAGAAACCCTCCAACAAGATTTTAGACGGCGCACATCAGCAGACTCAATTCTGTTGGGTTTATGCAAAAACGGCAACGAATTAAGTTGTTGAACTAGAAAATCTAATACTACAGTTTGTCATCGTACAGCGCATTCcttgaactgaaatgaattaGTATTTTCTGTGTTGAGGCACGAATCGACTTCGCCAGCCTTGAACTACAAACACGTTTCAAAAGTCAAAGTCAGGTAAACCTCTCTCTGACTCGAGTACACTCACGCCGTCTATTTTCAAAAGCAGCATTCACAGATATTAAAAGAGTAGTATGCTTTgttgttgtcacatgacctcttTATGCAGCATATACAGTTCGGCAAGTAAAGGATAATATCCTGTACATCCAGCTAAAAATCAACCCACGGCGCACAAAAGCAAACGGTTTTTAAACTTGGCAAACAAGTTCAAACATTATGGGTGTTTAAGGGAAAATGCAACTATaccacttatttttttttactacttgaATAAAGACtgtcatgaaatattgatttgaataTAATCCATTACAGTatacatttctatttgaatgtagtCAATAACTGAGGTGCAAGATGGCACTTTTTGTGCTTGAATAAAACGAGAGATTGTGTGCTACGGGAGATATTTAAACTCCATCTCATATACCCAGTGTATTGCCAGTTATTATACAGCTTTACTATTGGCGTCAGTCATTATTAGGAAAAACTGACCCAGAATGTCACAACAGACCAATCACAATCGAGCATTTCAGAGCACCGTTTGAGATTCAATTACCTTCTCAAAATATGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247047.1 True 1521 lncRNA 0.39 3 19414899 19421472

Neighbor

gene id symbol gene type direction distance location
LOC122323475 LOC107669946,LOC107554574,LOC107727308,LOC108274547 coding downstream 6247 19380778 ~ 19408652 (-)
rragcb rragcb,LOC107669953,LOC107727266,LOC107551762,LOC107681629,LOC107700741,LOC107730935 coding downstream 326116 19081572 ~ 19088783 (-)
fhl3b fhl3b,LOC107734040,LOC107551770,LOC107681628,LOC107669956,LOC107727270 coding downstream 334222 19063845 ~ 19080677 (-)
stpg1 stpg1,LOC107669955,LOC107734031,LOC107559684,LOC107727365,LOC107681611 coding downstream 380595 19029360 ~ 19034304 (-)
LOC122323972 map7d1,map7d1b,LOC107681622,LOC107734037,LOC107551771,LOC107669943 coding downstream 389564 18990232 ~ 19025335 (-)
st3gal1 LOC107665130,LOC107727731,LOC107549887 coding upstream 282324 19703796 ~ 19714904 (-)
fbxl20 fbxl20,LOC107666314,LOC107727724,LOC107665129,LOC107563017,LOC107549884 coding upstream 509509 19930981 ~ 19947690 (-)
chd4a chd4a,LOC107748913,LOC108433757,LOC107549834,LOC107086130 coding upstream 583823 20005295 ~ 20029751 (-)
tpi1a tpi1a,LOC107754015,LOC107666351,LOC107665177,LOC107727722,LOC107563024,LOC107549875,LOC103040446 coding upstream 625094 20046566 ~ 20052298 (-)
gnb3b gnb3b,LOC107665150,LOC107727720,LOC107753988,LOC107666347,LOC108433753,LOC107563025 coding upstream 632797 20054269 ~ 20058841 (-)
G134632 NA non-coding downstream 150602 19262718 ~ 19264297 (-)
G134592 NA non-coding downstream 356936 19047521 ~ 19057963 (-)
G134504 NA non-coding downstream 582050 18832232 ~ 18832849 (-)
G134428 NA non-coding downstream 828573 18572068 ~ 18586326 (-)
G134426 NA non-coding downstream 881399 18533173 ~ 18533500 (-)
G134675 NA non-coding upstream 71063 19492535 ~ 19493032 (-)
LOC122324126 NA non-coding upstream 76482 19497954 ~ 19528703 (-)
G134758 NA non-coding upstream 424424 19845896 ~ 19846359 (-)
G134760 NA non-coding upstream 467148 19888620 ~ 19888828 (-)
G134757 LOC107665134 non-coding upstream 503233 19924705 ~ 19969715 (-)
smim13 si:dkey-206d17.5,LOC107669968,LOC107559689,LOC107551766,LOC107734024,LOC106589022 other downstream 481671 18876614 ~ 18933228 (-)
LOC122324083 LOC107589493,LOC107693246,LOC107734014 other downstream 723650 18687349 ~ 18691249 (-)
cks1b cks1b,LOC107753514,LOC107589507,LOC107599584,LOC108433716,LOC103394526 other downstream 1173286 18225609 ~ 18241613 (-)
si:dkey-266f7.5 NA other downstream 1226870 18169523 ~ 18188029 (-)
G134318 NA other downstream 1403500 18010882 ~ 18011399 (-)
khdrbs3 khdrbs3,LOC107554584,LOC107566726,LOC107687064 other upstream 121310 19542782 ~ 19652807 (-)
LOC122324012 NA other upstream 249315 19670787 ~ 19688386 (-)
G134895 NA other upstream 960548 20382020 ~ 20382727 (-)
G134944 LOC107756202,LOC107600825,LOC107689598 other upstream 1028081 20449553 ~ 20451196 (-)
G134948 zgc:162872,LOC107756215,LOC107692254,LOC107600823 other upstream 1041477 20462949 ~ 20468681 (-)

Expression


Co-expression Network