LOC122323788


Basic Information

Item Value
gene id LOC122323788
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12091760 ~ 12093230 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247059.1
GGGCACTACATCAGTTATGTCCATGACGGATCTGAATGGCTTAAATGCAGTGACAACTCCATCAAAAAATCCAGCTGGACAAAGGCGTCAAAAAAAATGGGAAAGAATGGCTACATGCTCTTCTACGTGAAGAGTTGAGCGGCGACTGGTTGAGTGTTGGAGAGGAAAGGCTGGAAGACCGACTGGAAGTTTTCACTGTCCTGCTGTAAAAGTATGGGTCAGTTAATTAAACatctgccctctgctggccaGGTATTGAACACTCAGCTAAAATATtctgaaagacaagGGTGCCGAGATAAGACAGTGATACaaataaaagactaaaacaacagaaaaagagcaagagGAAGAATAAAGATGAGCCAGGAAAGAGAGACTGGACGATGGTGCCGTTGGGAAGGAGCAACATTTTAGTGAAGATCATTCTGTGGCTGACAGTCTCTGTCTCTGATTTCAAATGTACTTTGAAATCacacaataaaactaaacaatgttagaaaataacaatataataatgacatttgtGTATAGATAGGTACAAGAAATGATGAtatgattacaataaaattgtgatgaattaataaagaaagaatgaataaataaaaagaaagaaagaaaatgaaacataattGTTTGGTGACTCTCTTTCATCAACTCACTTTTAATCCACATAAGTCTACGAAGAAGACGCTtaataaagaagaaataaaaatagaaaatatattatctCCATCATGAGCGCTTCACAACTTCTAAGGTATGACTTTTTTCTGTGGAAAGCCACCTGCATATGTCTCATGCACTCATTTTGATTGAAGTGATTGTATAATAACATGTAAAATGCTTTACatcttattatattttcatgcatGTAATTAATTGAATCTTGCAATAAggtgaaaacatttatgaaattaaataacgAATCGATAAACTTTtggaagaaccttttgtggATTAGAAATGCTTGGTTGTTCAAAGTTCTTCAAGGAAAGTTCTTCATAGAAAACAAAGAAGAACATTCAACAATTAGGCTGTGTAACAAATAGATCCTCACTGAAAAGTACAGgcacaagaaaaacaaagttCTTACATTGGCTAATACTGACCTCTagtgtaaaaaagaaaaaaaatctcagcagaaggtttgtgcaataaataaatacaatgttcaGATTCACATCCATAAAGCAAAACCAATTTAATTCAAGCTTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247059.1 True 1220 lncRNA 0.34 4 12091760 12093230

Neighbor

gene id symbol gene type direction distance location
LOC122323872 NA coding upstream 6929 12081248 ~ 12084831 (+)
LOC122323780 NA coding upstream 13930 12076581 ~ 12077830 (+)
LOC122323766 NA coding upstream 20904 12068332 ~ 12070856 (+)
LOC122323759 LOC107660582,LOC107714390,LOC107657518,LOC107584150 coding upstream 319686 11764874 ~ 11772074 (+)
LOC122323870 ctnnal1,LOC107670281,LOC107724361,LOC107653856,LOC107710384 coding upstream 508823 11535963 ~ 11582937 (+)
LOC122323773 NA coding downstream 3861 12097091 ~ 12098898 (+)
LOC122323873 NA coding downstream 16326 12109556 ~ 12110827 (+)
LOC122323874 NA coding downstream 23300 12116530 ~ 12118582 (+)
LOC122323779 NA coding downstream 25262 12118492 ~ 12119894 (+)
sfpq LOC107722137,LOC107669930,LOC107566770,LOC107706594,LOC107558579,LOC107655760 coding downstream 28165 12121395 ~ 12139784 (+)
LOC122323796 NA non-coding upstream 1212 12090085 ~ 12090548 (+)
LOC122323792 NA non-coding upstream 5807 12085020 ~ 12085953 (+)
LOC122323795 NA non-coding upstream 13508 12077838 ~ 12078252 (+)
G132298 NA non-coding upstream 31381 12060037 ~ 12060379 (+)
G132291 NA non-coding upstream 258852 11832173 ~ 11832908 (+)
LOC122323793 NA non-coding downstream 10082 12103312 ~ 12103813 (+)
LOC122323789 NA non-coding downstream 12558 12105788 ~ 12106670 (+)
LOC122323790 NA non-coding downstream 19761 12112991 ~ 12113745 (+)
G132305 NA non-coding downstream 21529 12114759 ~ 12115354 (+)
G132311 NA non-coding downstream 97508 12190738 ~ 12192364 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 567879 11522229 ~ 11523881 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 1673664 10415640 ~ 10418096 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 2338204 9734220 ~ 9753556 (+)
G131801 trib1,LOC107724318,LOC107565192,LOC107702074,LOC107710180,LOC107556392,LOC107653840 other upstream 2452799 9636973 ~ 9638961 (+)
si:ch211-215i13.3 LOC107579802,LOC107724304,LOC107702091 other upstream 2553258 9536318 ~ 9538502 (+)
LOC122323774 NA other downstream 18049 12111279 ~ 12112897 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other downstream 330060 12423290 ~ 12425078 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 928187 13021417 ~ 13026026 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 1216197 13309427 ~ 13336749 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 2694314 14787544 ~ 15212430 (+)

Expression


Co-expression Network